RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 FKBP5Q13451 457 aaPredicted RBP10.71□□□□□ -0.69
MSL3-201ENST00000312196 USP48Q86UV5 1035 aa10.71□□□□□ -0.69
MSL3-201ENST00000312196 SCN9AQ15858 1988 aa10.71□□□□□ -0.7
MSL3-201ENST00000312196 USP17L3A6NCW0 530 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 USP17L4A6NCW7 530 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 TCERG1O14776 1098 aaKnown RBP10.7□□□□□ -0.7
MSL3-201ENST00000312196 CCT4P50991 539 aaKnown RBP10.7□□□□□ -0.7
MSL3-201ENST00000312196 KIF4BQ2VIQ3 1234 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 STRIP1Q5VSL9 837 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 USP17L1Q7RTZ2 530 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 KRT26Q7Z3Y9 468 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 SLC51AQ86UW1 340 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 GREM2Q9H772 168 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 ANKIB1Q9P2G1 1089 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 SPEF2Q9C093 1822 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 ANKRD18BA2A2Z9 1011 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 HUNKP57058 714 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 MTMR14Q8NCE2 650 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 MCOLN1Q9GZU1 580 aa10.7□□□□□ -0.7
MSL3-201ENST00000312196 AOC2O75106 756 aa10.69□□□□□ -0.7
MSL3-201ENST00000312196 SLFN5Q08AF3 891 aa10.69□□□□□ -0.7
MSL3-201ENST00000312196 CWF19L2Q2TBE0 894 aaKnown RBP10.69□□□□□ -0.7
MSL3-201ENST00000312196 UBE3BQ7Z3V4 1068 aa10.69□□□□□ -0.7
MSL3-201ENST00000312196 SULF1Q8IWU6 871 aa10.69□□□□□ -0.7
MSL3-201ENST00000312196 GRM8O00222 908 aa10.69□□□□□ -0.7
MSL3-201ENST00000312196 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
MSL3-201ENST00000312196 ZBED3Q96IU2 234 aaPredicted RBP10.69□□□□□ -0.7
MSL3-201ENST00000312196 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
MSL3-201ENST00000312196 LAMB1P07942 1786 aa10.69□□□□□ -0.7
MSL3-201ENST00000312196 KIF16BQ96L93 1317 aa10.69□□□□□ -0.7
MSL3-201ENST00000312196 ARAP2Q8WZ64 1704 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 ITGA6P23229 1130 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 RABL6Q3YEC7 729 aaPredicted RBP10.68□□□□□ -0.7
MSL3-201ENST00000312196 DACT2Q5SW24 774 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
MSL3-201ENST00000312196 ZNF804BA4D1E1 1349 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 G3V3G9 751 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 IL1R1P14778 569 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 DCAF8Q5TAQ9 597 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 SRCIN1Q9C0H9 1055 aa10.68□□□□□ -0.7
MSL3-201ENST00000312196 SPINK5Q9NQ38 1064 aaPredicted RBP10.68□□□□□ -0.7
MSL3-201ENST00000312196 UTRNP46939 3433 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 ECM29Q5VYK3 1845 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 USP17L8P0C7I0 530 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 TM4SF4P48230 202 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 FMR1Q06787 632 aaKnown RBP eCLIP10.67□□□□□ -0.7
MSL3-201ENST00000312196 IFIT5Q13325 482 aaKnown RBP10.67□□□□□ -0.7
MSL3-201ENST00000312196 DOK7Q18PE1 504 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 FBXO3Q9UK99 471 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 HDAC5Q9UQL6 1122 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 PPP2R3BQ9Y5P8 575 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 KIF23Q02241 960 aaPredicted RBP10.67□□□□□ -0.7
MSL3-201ENST00000312196 CTU1Q7Z7A3 348 aaKnown RBP10.67□□□□□ -0.7
MSL3-201ENST00000312196 CDCA5Q96FF9 252 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 MPHOSPH8Q99549 860 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 RNF186Q9NXI6 227 aa10.67□□□□□ -0.7
MSL3-201ENST00000312196 FAM205AQ6ZU69 1335 aa10.66□□□□□ -0.7
MSL3-201ENST00000312196 DGKZQ13574 1117 aa10.66□□□□□ -0.7
MSL3-201ENST00000312196 UBE4AQ14139 1066 aa10.66□□□□□ -0.7
MSL3-201ENST00000312196 SAMD7Q7Z3H4 446 aa10.66□□□□□ -0.7
MSL3-201ENST00000312196 RASAL3Q86YV0 1011 aa10.66□□□□□ -0.7
MSL3-201ENST00000312196 INHBEP58166 350 aa10.66□□□□□ -0.7
MSL3-201ENST00000312196 CHRNDQ07001 517 aa10.66□□□□□ -0.7
MSL3-201ENST00000312196 FAM161AQ3B820 660 aa10.66□□□□□ -0.7
MSL3-201ENST00000312196 RTL5Q5HYW3 569 aaPredicted RBP10.66□□□□□ -0.7
MSL3-201ENST00000312196 ZNF157P51786 506 aaPredicted RBP10.65□□□□□ -0.7
MSL3-201ENST00000312196 SCARF1Q14162 830 aa10.65□□□□□ -0.7
MSL3-201ENST00000312196 MAP3K11Q16584 847 aa10.65□□□□□ -0.7
MSL3-201ENST00000312196 TBC1D10BQ4KMP7 808 aaPredicted RBP10.65□□□□□ -0.7
MSL3-201ENST00000312196 APOBEC3FQ8IUX4 373 aaKnown RBP10.65□□□□□ -0.7
MSL3-201ENST00000312196 MYOZ2Q9NPC6 264 aa10.65□□□□□ -0.7
MSL3-201ENST00000312196 HDAC9Q9UKV0 1011 aa10.65□□□□□ -0.7
MSL3-201ENST00000312196 ZBTB12Q9Y330 459 aaPredicted RBP10.65□□□□□ -0.7
MSL3-201ENST00000312196 MROH5Q6ZUA9 1318 aa10.65□□□□□ -0.7
MSL3-201ENST00000312196 CCDC85CA6NKD9 419 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 ZNF804AQ7Z570 1209 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 FAM9BQ8IZU0 186 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 ARHGAP45Q92619 1136 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 CSRNP1Q96S65 589 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 MRIQ9BWK5 157 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 GGA3Q9NZ52 723 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 ALDH1A1P00352 501 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 NF2P35240 595 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 CCDC57Q2TAC2 916 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 JARID2Q92833 1246 aaPredicted RBP10.64□□□□□ -0.71
MSL3-201ENST00000312196 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 KCNQ5Q9NR82 932 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 CEP350Q5VT06 3117 aa10.64□□□□□ -0.71
MSL3-201ENST00000312196 SREBF2Q12772 1141 aa10.63□□□□□ -0.71
MSL3-201ENST00000312196 C9orf78Q9NZ63 289 aaPredicted RBP10.63□□□□□ -0.71
MSL3-201ENST00000312196 AKAP11Q9UKA4 1901 aa10.63□□□□□ -0.71
MSL3-201ENST00000312196 SHTN1A0MZ66 631 aa10.63□□□□□ -0.71
MSL3-201ENST00000312196 ADM5C9JUS6 153 aa10.63□□□□□ -0.71
MSL3-201ENST00000312196 HDLBPQ00341 1268 aaKnown RBP10.63□□□□□ -0.71
MSL3-201ENST00000312196 LMBR1LQ6UX01 489 aa10.63□□□□□ -0.71
MSL3-201ENST00000312196 SUGT1Q9Y2Z0 365 aa10.63□□□□□ -0.71
MSL3-201ENST00000312196 LDLRAD1Q5T700 205 aa10.62□□□□□ -0.71
MSL3-201ENST00000312196 OGFOD1Q8N543 542 aa10.62□□□□□ -0.71
MSL3-201ENST00000312196 TDRD7Q8NHU6 1098 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms