RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 RPAP2Q8IXW5 612 aaPredicted RBP15.27■□□□□ 0.04
VANGL1-201ENST00000310260 HELBQ8NG08 1087 aaPredicted RBP15.27■□□□□ 0.04
VANGL1-201ENST00000310260 GRAPLQ8TC17 118 aaPredicted RBP15.27■□□□□ 0.04
VANGL1-201ENST00000310260 CNKSR1Q969H4 720 aa15.27■□□□□ 0.04
VANGL1-201ENST00000310260 TAF1P21675 1872 aa15.27■□□□□ 0.03
VANGL1-201ENST00000310260 C21orf2O43822 256 aa15.27■□□□□ 0.03
VANGL1-201ENST00000310260 CYP2E1P05181 493 aaPredicted RBP15.27■□□□□ 0.03
VANGL1-201ENST00000310260 LRRC24Q50LG9 513 aa15.27■□□□□ 0.03
VANGL1-201ENST00000310260 CRAMP1Q96RY5 1269 aa15.27■□□□□ 0.03
VANGL1-201ENST00000310260 ARID3AQ99856 593 aa15.27■□□□□ 0.03
VANGL1-201ENST00000310260 LMBRD1Q9NUN5 540 aa15.27■□□□□ 0.03
VANGL1-201ENST00000310260 EXOC6BQ9Y2D4 811 aa15.27■□□□□ 0.03
VANGL1-201ENST00000310260 N4BP2Q86UW6 1770 aaPredicted RBP15.27■□□□□ 0.03
VANGL1-201ENST00000310260 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
VANGL1-201ENST00000310260 HMMRO75330 724 aa15.26■□□□□ 0.03
VANGL1-201ENST00000310260 PTPN12Q05209 780 aaKnown RBP15.26■□□□□ 0.03
VANGL1-201ENST00000310260 DALRD3Q5D0E6 543 aaKnown RBP15.26■□□□□ 0.03
VANGL1-201ENST00000310260 MCTP1Q6DN14 999 aa15.26■□□□□ 0.03
VANGL1-201ENST00000310260 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
VANGL1-201ENST00000310260 RFX5P48382 616 aaPredicted RBP15.26■□□□□ 0.03
VANGL1-201ENST00000310260 PRDM10Q9NQV6 1147 aa15.26■□□□□ 0.03
VANGL1-201ENST00000310260 BBOX1O75936 387 aa15.25■□□□□ 0.03
VANGL1-201ENST00000310260 MTX1Q13505 466 aa15.25■□□□□ 0.03
VANGL1-201ENST00000310260 SSH3Q8TE77 659 aa15.25■□□□□ 0.03
VANGL1-201ENST00000310260 TMX4Q9H1E5 349 aaPredicted RBP15.25■□□□□ 0.03
VANGL1-201ENST00000310260 A0A0U1RQG5 324 aaPredicted RBP15.24■□□□□ 0.03
VANGL1-201ENST00000310260 DMTNQ08495 405 aa15.24■□□□□ 0.03
VANGL1-201ENST00000310260 G3BP1Q13283 466 aaKnown RBP eCLIP15.24■□□□□ 0.03
VANGL1-201ENST00000310260 UTP14CQ5TAP6 766 aaKnown RBP15.24■□□□□ 0.03
VANGL1-201ENST00000310260 ANKIB1Q9P2G1 1089 aa15.24■□□□□ 0.03
VANGL1-201ENST00000310260 TAF5LO75529 589 aa15.24■□□□□ 0.03
VANGL1-201ENST00000310260 POLA2Q14181 598 aa15.24■□□□□ 0.03
VANGL1-201ENST00000310260 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
VANGL1-201ENST00000310260 ZHX1Q9UKY1 873 aaPredicted RBP15.24■□□□□ 0.03
VANGL1-201ENST00000310260 RIC1Q4ADV7 1423 aa15.23■□□□□ 0.03
VANGL1-201ENST00000310260 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
VANGL1-201ENST00000310260 LAMB2P55268 1798 aa15.23■□□□□ 0.03
VANGL1-201ENST00000310260 WTIPA6NIX2 430 aaPredicted RBP15.23■□□□□ 0.03
VANGL1-201ENST00000310260 SNAP23O00161 211 aa15.23■□□□□ 0.03
VANGL1-201ENST00000310260 METTL24Q5JXM2 366 aa15.23■□□□□ 0.03
VANGL1-201ENST00000310260 BSDC1Q9NW68 430 aaPredicted RBP15.23■□□□□ 0.03
VANGL1-201ENST00000310260 CCDC39Q9UFE4 941 aa15.23■□□□□ 0.03
VANGL1-201ENST00000310260 MYH3P11055 1940 aa15.23■□□□□ 0.03
VANGL1-201ENST00000310260 COL4A1P02462 1669 aa15.23■□□□□ 0.03
VANGL1-201ENST00000310260 EYA2O00167 538 aa15.22■□□□□ 0.03
VANGL1-201ENST00000310260 NCLP19338 710 aaKnown RBP15.22■□□□□ 0.03
VANGL1-201ENST00000310260 GPR162Q16538 588 aa15.22■□□□□ 0.03
VANGL1-201ENST00000310260 GPT2Q8TD30 523 aa15.22■□□□□ 0.03
VANGL1-201ENST00000310260 MINPP1Q9UNW1 487 aa15.22■□□□□ 0.03
VANGL1-201ENST00000310260 RTL9Q8NET4 1388 aa15.22■□□□□ 0.03
VANGL1-201ENST00000310260 NUCB2P80303 420 aa15.22■□□□□ 0.03
VANGL1-201ENST00000310260 PKP1Q13835 747 aa15.22■□□□□ 0.03
VANGL1-201ENST00000310260 COPRSQ9NQ92 184 aa15.22■□□□□ 0.03
VANGL1-201ENST00000310260 COL11A2P13942 1736 aaPredicted RBP15.22■□□□□ 0.03
VANGL1-201ENST00000310260 ZSCAN20P17040 1043 aaPredicted RBP15.21■□□□□ 0.03
VANGL1-201ENST00000310260 CHRNDQ07001 517 aa15.21■□□□□ 0.03
VANGL1-201ENST00000310260 ATP6V0A2Q9Y487 856 aa15.21■□□□□ 0.03
VANGL1-201ENST00000310260 GPSM2P81274 684 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 TFCP2Q12800 502 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 ATG9AQ7Z3C6 839 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 GPR101Q96P66 508 aaPredicted RBP15.2■□□□□ 0.02
VANGL1-201ENST00000310260 RBM27Q9P2N5 1060 aaKnown RBP15.2■□□□□ 0.02
VANGL1-201ENST00000310260 RIPOR2Q9Y4F9 1068 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 C6orf229H3BNL8 230 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
VANGL1-201ENST00000310260 KCNJ4P48050 445 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 SP8Q8IXZ3 490 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 IL1RAPL2Q9NP60 686 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 CEP126Q9P2H0 1117 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 SLX4Q8IY92 1834 aa15.2■□□□□ 0.02
VANGL1-201ENST00000310260 LRSAM1Q6UWE0 723 aa15.19■□□□□ 0.02
VANGL1-201ENST00000310260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.19■□□□□ 0.02
VANGL1-201ENST00000310260 YBX3P16989 372 aaKnown RBP eCLIP15.19■□□□□ 0.02
VANGL1-201ENST00000310260 RABEP1Q15276 862 aa15.19■□□□□ 0.02
VANGL1-201ENST00000310260 DPP8Q6V1X1 898 aaPredicted RBP15.19■□□□□ 0.02
VANGL1-201ENST00000310260 MPNDQ8N594 471 aa15.19■□□□□ 0.02
VANGL1-201ENST00000310260 IL15P40933 162 aaPredicted RBP15.18■□□□□ 0.02
VANGL1-201ENST00000310260 ANKRD45Q5TZF3 282 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 C7orf43Q8WVR3 580 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 TMEM63CQ9P1W3 806 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 KIF13BQ9NQT8 1826 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 CACNA1SQ13698 1873 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 CDC45O75419 566 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 UFL1O94874 794 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 SASH1O94885 1247 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 MYRIPQ8NFW9 859 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 NEUROD6Q96NK8 337 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 DCTPP1Q9H773 170 aa15.18■□□□□ 0.02
VANGL1-201ENST00000310260 RIMBP2O15034 1052 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 TIMM10P62072 90 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 SYCE3A1L190 88 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 PRPF40AO75400 957 aaKnown RBP15.17■□□□□ 0.02
VANGL1-201ENST00000310260 CIAO1O76071 339 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 CCDC93Q567U6 631 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 HSP90AB4PQ58FF6 505 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 TMC4Q7Z404 712 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 ANKRD2Q9GZV1 360 aa15.17■□□□□ 0.02
VANGL1-201ENST00000310260 GGA1Q9UJY5 639 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms