RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 LRRC24Q50LG9 513 aa12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 RIPOR2Q9Y4F9 1068 aa12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 GLTPD2A6NH11 291 aa12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 RFX5P48382 616 aaPredicted RBP12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 DBNDD1Q9H9R9 158 aa12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 ZNRF3Q9ULT6 936 aa12.07□□□□□ -0.48
CHRNA9-201ENST00000310169 WTIPA6NIX2 430 aaPredicted RBP12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 FZD9O00144 591 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 EYA2O00167 538 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 MTX1Q13505 466 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 BECN1Q14457 450 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 GLIPR1L2Q4G1C9 344 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 PA2G4Q9UQ80 394 aaKnown RBP12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 DUOX1Q9NRD9 1551 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 PNMA6EA0A0J9YXQ4 647 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 ATP8B2P98198 1209 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 GJA3Q9Y6H8 435 aa12.06□□□□□ -0.48
CHRNA9-201ENST00000310169 LTBP1Q14766 1721 aa12.05□□□□□ -0.48
CHRNA9-201ENST00000310169 SNAP23O00161 211 aa12.05□□□□□ -0.48
CHRNA9-201ENST00000310169 DDNO94850 711 aaPredicted RBP12.05□□□□□ -0.48
CHRNA9-201ENST00000310169 COPRSQ9NQ92 184 aa12.05□□□□□ -0.48
CHRNA9-201ENST00000310169 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
CHRNA9-201ENST00000310169 ECE2O60344 883 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 PDE8BO95263 885 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 RAD17O75943 681 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 CIAO1O76071 339 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 IL15P40933 162 aaPredicted RBP12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 G3BP1Q13283 466 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 UBE4AQ14139 1066 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 TNIP1Q15025 636 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 ZNF541Q9H0D2 1346 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 MED23Q9ULK4 1368 aa12.04□□□□□ -0.48
CHRNA9-201ENST00000310169 CXCL9Q07325 125 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 OS9Q13438 667 aaPredicted RBP12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 CIAPIN1Q6FI81 312 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 TXNRD3Q86VQ6 643 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 GPC2Q8N158 579 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 RRAGCQ9HB90 399 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 COL4A5P29400 1685 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 SURF6O75683 361 aaKnown RBP12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 CEP85Q6P2H3 762 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 ATG9AQ7Z3C6 839 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 VPS37DQ86XT2 251 aa12.03□□□□□ -0.48
CHRNA9-201ENST00000310169 YDJCA8MPS7 323 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 HMMRO75330 724 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 VEGFAP15692 232 aaPredicted RBP12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 KLRK1P26718 216 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 PUM3Q15397 648 aaKnown RBP12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 ZNF804AQ7Z570 1209 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 RPAP2Q8IXW5 612 aaPredicted RBP12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 SSH3Q8TE77 659 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 COA1Q9GZY4 146 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 NMRK2Q9NPI5 230 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 A0A1B0GUL6 1792 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 IFIT1P09914 478 aaKnown RBP12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 POLA2Q14181 598 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 CAVIN4Q5BKX8 364 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 C16orf71Q8IYS4 520 aaPredicted RBP12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 BRPF3Q9ULD4 1205 aa12.02□□□□□ -0.49
CHRNA9-201ENST00000310169 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
CHRNA9-201ENST00000310169 VGLL2Q8N8G2 317 aa12.01□□□□□ -0.49
CHRNA9-201ENST00000310169 KCNQ5Q9NR82 932 aa12.01□□□□□ -0.49
CHRNA9-201ENST00000310169 IQCA1LA6NCM1 817 aa12□□□□□ -0.49
CHRNA9-201ENST00000310169 FRAT2O75474 233 aaPredicted RBP12□□□□□ -0.49
CHRNA9-201ENST00000310169 SLC5A1P13866 664 aa12□□□□□ -0.49
CHRNA9-201ENST00000310169 LPIN2Q92539 896 aa12□□□□□ -0.49
CHRNA9-201ENST00000310169 PSMD14O00487 310 aa12□□□□□ -0.49
CHRNA9-201ENST00000310169 HIBADHP31937 336 aaKnown RBP12□□□□□ -0.49
CHRNA9-201ENST00000310169 GYG1P46976 350 aa12□□□□□ -0.49
CHRNA9-201ENST00000310169 ATP2B3Q16720 1220 aa12□□□□□ -0.49
CHRNA9-201ENST00000310169 C15orf52Q6ZUT6 534 aaKnown RBP12□□□□□ -0.49
CHRNA9-201ENST00000310169 CD209Q9NNX6 404 aa12□□□□□ -0.49
CHRNA9-201ENST00000310169 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
CHRNA9-201ENST00000310169 USP17L3A6NCW0 530 aa11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 USP17L4A6NCW7 530 aa11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 TFCP2Q12800 502 aa11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 TTLL5Q6EMB2 1281 aa11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 USP17L1Q7RTZ2 530 aa11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 NEUROD6Q96NK8 337 aa11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 ZBTB12Q9Y330 459 aaPredicted RBP11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 SCN9AQ15858 1988 aa11.99□□□□□ -0.49
CHRNA9-201ENST00000310169 GMPSP49915 693 aaPredicted RBP11.98□□□□□ -0.49
CHRNA9-201ENST00000310169 TIMM10P62072 90 aa11.98□□□□□ -0.49
CHRNA9-201ENST00000310169 GTF2IP78347 998 aa11.98□□□□□ -0.49
CHRNA9-201ENST00000310169 HSP90AB4PQ58FF6 505 aa11.98□□□□□ -0.49
CHRNA9-201ENST00000310169 FAM84BQ96KN1 310 aaPredicted RBP11.98□□□□□ -0.49
CHRNA9-201ENST00000310169 EXOC6BQ9Y2D4 811 aa11.98□□□□□ -0.49
CHRNA9-201ENST00000310169 VIL1P09327 827 aaKnown RBP11.98□□□□□ -0.49
CHRNA9-201ENST00000310169 FGFR2P21802 821 aa11.98□□□□□ -0.49
CHRNA9-201ENST00000310169 BCAMP50895 628 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms