RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 SBF1O95248 1867 aa15.92■□□□□ 0.14
APTX-201ENST00000309615 RAB11FIP3O75154 756 aa15.91■□□□□ 0.14
APTX-201ENST00000309615 TIMM10P62072 90 aa15.91■□□□□ 0.14
APTX-201ENST00000309615 DOK7Q18PE1 504 aa15.91■□□□□ 0.14
APTX-201ENST00000309615 C15orf52Q6ZUT6 534 aaKnown RBP15.91■□□□□ 0.14
APTX-201ENST00000309615 KIF1BPQ96EK5 621 aa15.91■□□□□ 0.14
APTX-201ENST00000309615 DBNDD1Q9H9R9 158 aa15.91■□□□□ 0.14
APTX-201ENST00000309615 IL1RAPL2Q9NP60 686 aa15.91■□□□□ 0.14
APTX-201ENST00000309615 AKAP2Q9Y2D5 859 aa15.91■□□□□ 0.14
APTX-201ENST00000309615 A0A1B0GUL7 405 aa15.9■□□□□ 0.14
APTX-201ENST00000309615 IFIT1P09914 478 aaKnown RBP15.9■□□□□ 0.14
APTX-201ENST00000309615 SLC5A1P13866 664 aa15.9■□□□□ 0.14
APTX-201ENST00000309615 GYG1P46976 350 aa15.9■□□□□ 0.14
APTX-201ENST00000309615 JDP2Q8WYK2 163 aa15.9■□□□□ 0.14
APTX-201ENST00000309615 BCL11AQ9H165 835 aa15.9■□□□□ 0.14
APTX-201ENST00000309615 ZNF609O15014 1411 aa15.9■□□□□ 0.14
APTX-201ENST00000309615 CCDC88AQ3V6T2 1871 aa15.9■□□□□ 0.14
APTX-201ENST00000309615 ADORA1P30542 326 aa15.89■□□□□ 0.13
APTX-201ENST00000309615 TNNI3KQ59H18 835 aa15.89■□□□□ 0.13
APTX-201ENST00000309615 NIM1KQ8IY84 436 aa15.89■□□□□ 0.13
APTX-201ENST00000309615 FAM84BQ96KN1 310 aaPredicted RBP15.89■□□□□ 0.13
APTX-201ENST00000309615 NEUROD6Q96NK8 337 aa15.89■□□□□ 0.13
APTX-201ENST00000309615 FPGT-TNNI3KV9GXZ4 949 aa15.89■□□□□ 0.13
APTX-201ENST00000309615 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
APTX-201ENST00000309615 ECE2O60344 883 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 EAF2Q96CJ1 260 aaPredicted RBP15.88■□□□□ 0.13
APTX-201ENST00000309615 LRRCC1Q9C099 1032 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 GPR108Q9NPR9 543 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 YDJCA8MPS7 323 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 G3V3G9 751 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 BCAMP50895 628 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 DCAF8Q5TAQ9 597 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 GCC1Q96CN9 775 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 XAGE2Q96GT9 111 aa15.88■□□□□ 0.13
APTX-201ENST00000309615 HIBADHP31937 336 aaKnown RBP15.87■□□□□ 0.13
APTX-201ENST00000309615 ZNF804AQ7Z570 1209 aa15.87■□□□□ 0.13
APTX-201ENST00000309615 FBXO33Q7Z6M2 555 aa15.87■□□□□ 0.13
APTX-201ENST00000309615 COA1Q9GZY4 146 aa15.87■□□□□ 0.13
APTX-201ENST00000309615 KCNQ5Q9NR82 932 aa15.87■□□□□ 0.13
APTX-201ENST00000309615 ZNRF3Q9ULT6 936 aa15.87■□□□□ 0.13
APTX-201ENST00000309615 FZD9O00144 591 aa15.86■□□□□ 0.13
APTX-201ENST00000309615 CAVIN4Q5BKX8 364 aa15.86■□□□□ 0.13
APTX-201ENST00000309615 AACSQ86V21 672 aa15.86■□□□□ 0.13
APTX-201ENST00000309615 VPS37DQ86XT2 251 aa15.86■□□□□ 0.13
APTX-201ENST00000309615 SMC5Q8IY18 1101 aa15.86■□□□□ 0.13
APTX-201ENST00000309615 CCDC8Q9H0W5 538 aaPredicted RBP15.86■□□□□ 0.13
APTX-201ENST00000309615 CD209Q9NNX6 404 aa15.86■□□□□ 0.13
APTX-201ENST00000309615 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
APTX-201ENST00000309615 DICER1Q9UPY3 1922 aaKnown RBP15.86■□□□□ 0.13
APTX-201ENST00000309615 CLASRPQ8N2M8 674 aaKnown RBP15.86■□□□□ 0.13
APTX-201ENST00000309615 DBNDD2Q9BQY9 259 aa15.86■□□□□ 0.13
APTX-201ENST00000309615 DBNLQ9UJU6 430 aaKnown RBP15.86■□□□□ 0.13
APTX-201ENST00000309615 TIAM2Q8IVF5 1701 aa15.86■□□□□ 0.13
APTX-201ENST00000309615 PHKA1P46020 1223 aa15.85■□□□□ 0.13
APTX-201ENST00000309615 B4GALNT3Q6L9W6 998 aa15.85■□□□□ 0.13
APTX-201ENST00000309615 PODNQ7Z5L7 613 aa15.85■□□□□ 0.13
APTX-201ENST00000309615 IQSEC3Q9UPP2 1182 aaPredicted RBP15.85■□□□□ 0.13
APTX-201ENST00000309615 ZNF541Q9H0D2 1346 aa15.85■□□□□ 0.13
APTX-201ENST00000309615 RAD17O75943 681 aa15.84■□□□□ 0.13
APTX-201ENST00000309615 IL1R1P14778 569 aa15.84■□□□□ 0.13
APTX-201ENST00000309615 ANKRD45Q5TZF3 282 aa15.84■□□□□ 0.13
APTX-201ENST00000309615 CCDC102BQ68D86 513 aa15.84■□□□□ 0.13
APTX-201ENST00000309615 ARAP2Q8WZ64 1704 aa15.84■□□□□ 0.13
APTX-201ENST00000309615 EIF6P56537 245 aaKnown RBP15.84■□□□□ 0.13
APTX-201ENST00000309615 CXCL9Q07325 125 aa15.84■□□□□ 0.13
APTX-201ENST00000309615 GORABQ5T7V8 394 aa15.84■□□□□ 0.13
APTX-201ENST00000309615 TDRD7Q8NHU6 1098 aaKnown RBP15.84■□□□□ 0.13
APTX-201ENST00000309615 ZC3H4Q9UPT8 1303 aaKnown RBP15.84■□□□□ 0.13
APTX-201ENST00000309615 CHD4Q14839 1912 aa15.83■□□□□ 0.12
APTX-201ENST00000309615 IFIT2P09913 472 aaKnown RBP15.83■□□□□ 0.12
APTX-201ENST00000309615 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
APTX-201ENST00000309615 JAG2Q9Y219 1238 aa15.82■□□□□ 0.12
APTX-201ENST00000309615 SCN9AQ15858 1988 aa15.82■□□□□ 0.12
APTX-201ENST00000309615 PSMD14O00487 310 aa15.82■□□□□ 0.12
APTX-201ENST00000309615 C16orf71Q8IYS4 520 aaPredicted RBP15.82■□□□□ 0.12
APTX-201ENST00000309615 CCDC136Q96JN2 1154 aa15.82■□□□□ 0.12
APTX-201ENST00000309615 FRAT2O75474 233 aaPredicted RBP15.81■□□□□ 0.12
APTX-201ENST00000309615 GTF2IP78347 998 aa15.81■□□□□ 0.12
APTX-201ENST00000309615 NUCB1Q02818 461 aa15.81■□□□□ 0.12
APTX-201ENST00000309615 TTLL5Q6EMB2 1281 aa15.81■□□□□ 0.12
APTX-201ENST00000309615 CIAPIN1Q6FI81 312 aa15.81■□□□□ 0.12
APTX-201ENST00000309615 FBXW7Q969H0 707 aa15.81■□□□□ 0.12
APTX-201ENST00000309615 LNPKQ9C0E8 428 aa15.81■□□□□ 0.12
APTX-201ENST00000309615 GNL3LQ9NVN8 582 aaKnown RBP15.81■□□□□ 0.12
APTX-201ENST00000309615 KDM2BQ8NHM5 1336 aa15.81■□□□□ 0.12
APTX-201ENST00000309615 USP17L3A6NCW0 530 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 USP17L4A6NCW7 530 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
APTX-201ENST00000309615 CCDC158Q5M9N0 1113 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 USP17L1Q7RTZ2 530 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
APTX-201ENST00000309615 MXD3Q9BW11 206 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 ZBTB47Q9UFB7 747 aaPredicted RBP15.8■□□□□ 0.12
APTX-201ENST00000309615 GJA3Q9Y6H8 435 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 COL1A1P02452 1464 aaPredicted RBP15.8■□□□□ 0.12
APTX-201ENST00000309615 CHAF1AQ13111 956 aaPredicted RBP15.8■□□□□ 0.12
APTX-201ENST00000309615 RASGRF1Q13972 1273 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 SCARF1Q14162 830 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 TTC39AQ5SRH9 613 aa15.8■□□□□ 0.12
APTX-201ENST00000309615 STRIP1Q5VSL9 837 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms