RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
PTCD2-201ENST00000308077 IGHMBP2P38935 993 aaKnown RBP8.48□□□□□ -1.05
PTCD2-201ENST00000308077 CNTROBQ8N137 903 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 HELBQ8NG08 1087 aaPredicted RBP8.48□□□□□ -1.05
PTCD2-201ENST00000308077 CELF1Q92879 486 aaKnown RBP8.48□□□□□ -1.05
PTCD2-201ENST00000308077 MPHOSPH8Q99549 860 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 AKAP2Q9Y2D5 859 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 NDUFB9Q9Y6M9 179 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 MROH5Q6ZUA9 1318 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 PDE8BO95263 885 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 FGFR2P21802 821 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 SLC15A2Q16348 729 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 ATP2B3Q16720 1220 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 EDC3Q96F86 508 aaKnown RBP8.48□□□□□ -1.05
PTCD2-201ENST00000308077 XAGE2Q96GT9 111 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 CDC5LQ99459 802 aaKnown RBP8.48□□□□□ -1.05
PTCD2-201ENST00000308077 IL25Q9H293 177 aa8.48□□□□□ -1.05
PTCD2-201ENST00000308077 AKAP11Q9UKA4 1901 aa8.47□□□□□ -1.05
PTCD2-201ENST00000308077 SNAP23O00161 211 aa8.47□□□□□ -1.05
PTCD2-201ENST00000308077 NPHP1O15259 732 aa8.47□□□□□ -1.05
PTCD2-201ENST00000308077 TAF5LO75529 589 aa8.47□□□□□ -1.05
PTCD2-201ENST00000308077 ANP32AP39687 249 aaKnown RBP8.47□□□□□ -1.05
PTCD2-201ENST00000308077 ANKRD18AQ8IVF6 992 aa8.47□□□□□ -1.05
PTCD2-201ENST00000308077 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
PTCD2-201ENST00000308077 C22orf23Q9BZE7 217 aa8.47□□□□□ -1.05
PTCD2-201ENST00000308077 UPF2Q9HAU5 1272 aaKnown RBP8.47□□□□□ -1.05
PTCD2-201ENST00000308077 CHRNDQ07001 517 aa8.46□□□□□ -1.05
PTCD2-201ENST00000308077 CASC1Q6TDU7 716 aa8.46□□□□□ -1.05
PTCD2-201ENST00000308077 NLGN1Q8N2Q7 840 aa8.46□□□□□ -1.05
PTCD2-201ENST00000308077 EVI5LQ96CN4 794 aa8.46□□□□□ -1.05
PTCD2-201ENST00000308077 HAUS7Q99871 368 aa8.46□□□□□ -1.05
PTCD2-201ENST00000308077 COL25A1Q9BXS0 654 aaPredicted RBP8.46□□□□□ -1.05
PTCD2-201ENST00000308077 BSDC1Q9NW68 430 aaPredicted RBP8.46□□□□□ -1.05
PTCD2-201ENST00000308077 ST5P78524 1137 aa8.46□□□□□ -1.06
PTCD2-201ENST00000308077 PUM3Q15397 648 aaKnown RBP8.46□□□□□ -1.06
PTCD2-201ENST00000308077 MSL1Q68DK7 614 aa8.46□□□□□ -1.06
PTCD2-201ENST00000308077 SLC51AQ86UW1 340 aa8.46□□□□□ -1.06
PTCD2-201ENST00000308077 SMC1BQ8NDV3 1235 aa8.46□□□□□ -1.06
PTCD2-201ENST00000308077 DNAJC2Q99543 621 aaKnown RBP8.46□□□□□ -1.06
PTCD2-201ENST00000308077 PDGFDQ9GZP0 370 aaPredicted RBP8.46□□□□□ -1.06
PTCD2-201ENST00000308077 WBP1LQ9NX94 342 aa8.46□□□□□ -1.06
PTCD2-201ENST00000308077 STK32BQ9NY57 414 aa8.46□□□□□ -1.06
PTCD2-201ENST00000308077 COL11A2P13942 1736 aaPredicted RBP8.46□□□□□ -1.06
PTCD2-201ENST00000308077 RBM25P49756 843 aaKnown RBP8.45□□□□□ -1.06
PTCD2-201ENST00000308077 RPS8P62241 208 aaKnown RBP8.45□□□□□ -1.06
PTCD2-201ENST00000308077 SCARF1Q14162 830 aa8.45□□□□□ -1.06
PTCD2-201ENST00000308077 CRY2Q49AN0 593 aa8.45□□□□□ -1.06
PTCD2-201ENST00000308077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTCD2-201ENST00000308077 LPIN2Q92539 896 aa8.45□□□□□ -1.06
PTCD2-201ENST00000308077 USP26Q9BXU7 913 aa8.45□□□□□ -1.06
PTCD2-201ENST00000308077 MINPP1Q9UNW1 487 aa8.45□□□□□ -1.06
PTCD2-201ENST00000308077 SYNGAP1Q96PV0 1343 aa8.45□□□□□ -1.06
PTCD2-201ENST00000308077 WTIPA6NIX2 430 aaPredicted RBP8.45□□□□□ -1.06
PTCD2-201ENST00000308077 MMP10P09238 476 aa8.45□□□□□ -1.06
PTCD2-201ENST00000308077 IFIT1P09914 478 aaKnown RBP8.45□□□□□ -1.06
PTCD2-201ENST00000308077 TTC39AQ5SRH9 613 aa8.45□□□□□ -1.06
PTCD2-201ENST00000308077 DDX46Q7L014 1031 aaKnown RBP8.45□□□□□ -1.06
PTCD2-201ENST00000308077 MYO5AQ9Y4I1 1855 aaKnown RBP8.45□□□□□ -1.06
PTCD2-201ENST00000308077 KLRG2A4D1S0 409 aaPredicted RBP8.44□□□□□ -1.06
PTCD2-201ENST00000308077 SGSM2O43147 1006 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 CHGBP05060 677 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 SLC5A1P13866 664 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 MCAMP43121 646 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 PHKA1P46020 1223 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 GRAPQ13588 217 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 CCDC158Q5M9N0 1113 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 GORABQ5T7V8 394 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 PI16Q6UXB8 463 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 GRAPLQ8TC17 118 aaPredicted RBP8.44□□□□□ -1.06
PTCD2-201ENST00000308077 FSD1Q9BTV5 496 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 ANTXR1Q9H6X2 564 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 PAG1Q9NWQ8 432 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 MYH7P12883 1935 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 RFX7Q2KHR2 1363 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 LRRC37AA6NMS7 1700 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 GOLIM4O00461 696 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 ARID4AP29374 1257 aaPredicted RBP8.44□□□□□ -1.06
PTCD2-201ENST00000308077 NMIQ13287 307 aaPredicted RBP8.44□□□□□ -1.06
PTCD2-201ENST00000308077 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 CWC27Q6UX04 472 aaKnown RBP8.44□□□□□ -1.06
PTCD2-201ENST00000308077 FAM227BQ96M60 508 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 IPO9Q96P70 1041 aaKnown RBP8.44□□□□□ -1.06
PTCD2-201ENST00000308077 KIF2CQ99661 725 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 SNRKQ9NRH2 765 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 DIAPH3Q9NSV4 1193 aa8.44□□□□□ -1.06
PTCD2-201ENST00000308077 A0A0D9SFI3 127 aa8.43□□□□□ -1.06
PTCD2-201ENST00000308077 REC8O95072 547 aa8.43□□□□□ -1.06
PTCD2-201ENST00000308077 ZAP70P43403 619 aa8.43□□□□□ -1.06
PTCD2-201ENST00000308077 KBTBD3Q8NAB2 608 aa8.43□□□□□ -1.06
PTCD2-201ENST00000308077 RPGRQ92834 1020 aaKnown RBP8.43□□□□□ -1.06
PTCD2-201ENST00000308077 ZNF512BQ96KM6 892 aaPredicted RBP8.43□□□□□ -1.06
PTCD2-201ENST00000308077 PARP3Q9Y6F1 533 aa8.43□□□□□ -1.06
PTCD2-201ENST00000308077 DOCK2Q92608 1830 aa8.43□□□□□ -1.06
PTCD2-201ENST00000308077 EIF5BO60841 1220 aaKnown RBP8.42□□□□□ -1.06
PTCD2-201ENST00000308077 BCAMP50895 628 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 UBE4AQ14139 1066 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 LSG1Q9H089 658 aaKnown RBP8.42□□□□□ -1.06
PTCD2-201ENST00000308077 ANO2Q9NQ90 1003 aa8.42□□□□□ -1.06
PTCD2-201ENST00000308077 CACNA1SQ13698 1873 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms