RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 RTKN2Q8IZC4 609 aa33.38■■■□□ 2.93
HDAC3-201ENST00000305264 NEUROD6Q96NK8 337 aa33.38■■■□□ 2.93
HDAC3-201ENST00000305264 C6orf229H3BNL8 230 aa33.38■■■□□ 2.93
HDAC3-201ENST00000305264 ADORA1P30542 326 aa33.38■■■□□ 2.93
HDAC3-201ENST00000305264 SLC5A1P13866 664 aa33.37■■■□□ 2.93
HDAC3-201ENST00000305264 OTUD7AQ8TE49 926 aaPredicted RBP33.37■■■□□ 2.93
HDAC3-201ENST00000305264 DBNLQ9UJU6 430 aaKnown RBP33.37■■■□□ 2.93
HDAC3-201ENST00000305264 IRS2Q9Y4H2 1338 aa33.37■■■□□ 2.93
HDAC3-201ENST00000305264 RTFDC1Q9BY42 306 aaPredicted RBP33.36■■■□□ 2.93
HDAC3-201ENST00000305264 GRIPAP1Q4V328 841 aa33.36■■■□□ 2.93
HDAC3-201ENST00000305264 SKAP1Q86WV1 359 aa33.36■■■□□ 2.93
HDAC3-201ENST00000305264 DBNDD2Q9BQY9 259 aa33.36■■■□□ 2.93
HDAC3-201ENST00000305264 IFIT1P09914 478 aaKnown RBP33.35■■■□□ 2.93
HDAC3-201ENST00000305264 TXNRD3Q86VQ6 643 aa33.35■■■□□ 2.93
HDAC3-201ENST00000305264 XAGE2Q96GT9 111 aa33.35■■■□□ 2.93
HDAC3-201ENST00000305264 IFIT2P09913 472 aaKnown RBP33.34■■■□□ 2.93
HDAC3-201ENST00000305264 NFKBIEO00221 500 aa33.34■■■□□ 2.93
HDAC3-201ENST00000305264 PSMD1Q99460 953 aa33.34■■■□□ 2.93
HDAC3-201ENST00000305264 PDE4AP27815 886 aa33.33■■■□□ 2.93
HDAC3-201ENST00000305264 MED23Q9ULK4 1368 aa33.33■■■□□ 2.93
HDAC3-201ENST00000305264 FKBP4Q02790 459 aaKnown RBP eCLIP33.32■■■□□ 2.93
HDAC3-201ENST00000305264 TAOK3Q9H2K8 898 aa33.31■■■□□ 2.92
HDAC3-201ENST00000305264 SALL3Q9BXA9 1300 aa33.31■■■□□ 2.92
HDAC3-201ENST00000305264 GYG1P46976 350 aa33.3■■■□□ 2.92
HDAC3-201ENST00000305264 RIMBP2O15034 1052 aa33.29■■■□□ 2.92
HDAC3-201ENST00000305264 RASSF7Q02833 373 aa33.29■■■□□ 2.92
HDAC3-201ENST00000305264 WASHC4Q2M389 1173 aa33.29■■■□□ 2.92
HDAC3-201ENST00000305264 C15orf52Q6ZUT6 534 aaKnown RBP33.29■■■□□ 2.92
HDAC3-201ENST00000305264 SUPT20HQ8NEM7 779 aa33.29■■■□□ 2.92
HDAC3-201ENST00000305264 ZNF277Q9NRM2 450 aaPredicted RBP33.29■■■□□ 2.92
HDAC3-201ENST00000305264 FAM84BQ96KN1 310 aaPredicted RBP33.29■■■□□ 2.92
HDAC3-201ENST00000305264 EYA3Q99504 573 aa33.29■■■□□ 2.92
HDAC3-201ENST00000305264 BCAMP50895 628 aa33.28■■■□□ 2.92
HDAC3-201ENST00000305264 GPR162Q16538 588 aa33.28■■■□□ 2.92
HDAC3-201ENST00000305264 TSHZ3Q63HK5 1081 aa33.28■■■□□ 2.92
HDAC3-201ENST00000305264 PHKA1P46020 1223 aa33.27■■■□□ 2.92
HDAC3-201ENST00000305264 AOC3Q16853 763 aa33.27■■■□□ 2.92
HDAC3-201ENST00000305264 GORABQ5T7V8 394 aa33.27■■■□□ 2.92
HDAC3-201ENST00000305264 ARHGAP27Q6ZUM4 889 aa33.27■■■□□ 2.92
HDAC3-201ENST00000305264 LTBP3Q9NS15 1303 aa33.27■■■□□ 2.92
HDAC3-201ENST00000305264 MX1P20591 662 aa33.26■■■□□ 2.91
HDAC3-201ENST00000305264 CCDC102BQ68D86 513 aa33.26■■■□□ 2.91
HDAC3-201ENST00000305264 ZC3H12CQ9C0D7 883 aaKnown RBP33.26■■■□□ 2.91
HDAC3-201ENST00000305264 COL4A5P29400 1685 aa33.26■■■□□ 2.91
HDAC3-201ENST00000305264 CCDC88AQ3V6T2 1871 aa33.25■■■□□ 2.91
HDAC3-201ENST00000305264 KIAA2012Q0VF49 1180 aa33.25■■■□□ 2.91
HDAC3-201ENST00000305264 CAVIN4Q5BKX8 364 aa33.25■■■□□ 2.91
HDAC3-201ENST00000305264 FBXO33Q7Z6M2 555 aa33.25■■■□□ 2.91
HDAC3-201ENST00000305264 PPIP5K2O43314 1243 aa33.24■■■□□ 2.91
HDAC3-201ENST00000305264 PLEKHM2Q8IWE5 1019 aa33.24■■■□□ 2.91
HDAC3-201ENST00000305264 PRELPP51888 382 aa33.23■■■□□ 2.91
HDAC3-201ENST00000305264 MYH13Q9UKX3 1938 aa33.23■■■□□ 2.91
HDAC3-201ENST00000305264 HIBADHP31937 336 aaKnown RBP33.23■■■□□ 2.91
HDAC3-201ENST00000305264 VPS37DQ86XT2 251 aa33.23■■■□□ 2.91
HDAC3-201ENST00000305264 PDE1AP54750 535 aa33.22■■■□□ 2.91
HDAC3-201ENST00000305264 ZNF804AQ7Z570 1209 aa33.22■■■□□ 2.91
HDAC3-201ENST00000305264 SBF1O95248 1867 aa33.22■■■□□ 2.91
HDAC3-201ENST00000305264 CHD4Q14839 1912 aa33.21■■■□□ 2.91
HDAC3-201ENST00000305264 IARSP41252 1262 aaKnown RBP33.21■■■□□ 2.91
HDAC3-201ENST00000305264 CCDC158Q5M9N0 1113 aa33.21■■■□□ 2.91
HDAC3-201ENST00000305264 ECHDC1Q9NTX5 307 aa33.21■■■□□ 2.91
HDAC3-201ENST00000305264 DOK7Q18PE1 504 aa33.21■■■□□ 2.91
HDAC3-201ENST00000305264 TTC39AQ5SRH9 613 aa33.21■■■□□ 2.91
HDAC3-201ENST00000305264 IQSEC3Q9UPP2 1182 aaPredicted RBP33.21■■■□□ 2.91
HDAC3-201ENST00000305264 RGS3P49796 1198 aa33.2■■■□□ 2.91
HDAC3-201ENST00000305264 GPATCH3Q96I76 525 aa33.2■■■□□ 2.91
HDAC3-201ENST00000305264 STAP2Q9UGK3 403 aa33.2■■■□□ 2.91
HDAC3-201ENST00000305264 AKAP11Q9UKA4 1901 aa33.2■■■□□ 2.9
HDAC3-201ENST00000305264 DBNDD1Q9H9R9 158 aa33.2■■■□□ 2.9
HDAC3-201ENST00000305264 TTC41PQ6P2S7 1318 aa33.19■■■□□ 2.9
HDAC3-201ENST00000305264 ARID4AP29374 1257 aaPredicted RBP33.19■■■□□ 2.9
HDAC3-201ENST00000305264 LARGE2Q8N3Y3 721 aa33.19■■■□□ 2.9
HDAC3-201ENST00000305264 CD209Q9NNX6 404 aa33.19■■■□□ 2.9
HDAC3-201ENST00000305264 COL1A1P02452 1464 aaPredicted RBP33.19■■■□□ 2.9
HDAC3-201ENST00000305264 SCARF1Q14162 830 aa33.18■■■□□ 2.9
HDAC3-201ENST00000305264 PI4K2BQ8TCG2 481 aa33.18■■■□□ 2.9
HDAC3-201ENST00000305264 VPS33BQ9H267 617 aa33.18■■■□□ 2.9
HDAC3-201ENST00000305264 COA1Q9GZY4 146 aa33.18■■■□□ 2.9
HDAC3-201ENST00000305264 SCN9AQ15858 1988 aa33.17■■■□□ 2.9
HDAC3-201ENST00000305264 MCAMP43121 646 aa33.16■■■□□ 2.9
HDAC3-201ENST00000305264 RASGRF1Q13972 1273 aa33.16■■■□□ 2.9
HDAC3-201ENST00000305264 PI16Q6UXB8 463 aa33.16■■■□□ 2.9
HDAC3-201ENST00000305264 ECE2O60344 883 aa33.16■■■□□ 2.9
HDAC3-201ENST00000305264 IL1R1P14778 569 aa33.16■■■□□ 2.9
HDAC3-201ENST00000305264 ATP5JP18859 108 aa33.16■■■□□ 2.9
HDAC3-201ENST00000305264 ZNF512BQ96KM6 892 aaPredicted RBP33.16■■■□□ 2.9
HDAC3-201ENST00000305264 OSBPL3Q9H4L5 887 aa33.16■■■□□ 2.9
HDAC3-201ENST00000305264 GNL3LQ9NVN8 582 aaKnown RBP33.16■■■□□ 2.9
HDAC3-201ENST00000305264 DICER1Q9UPY3 1922 aaKnown RBP33.15■■■□□ 2.9
HDAC3-201ENST00000305264 G3V3G9 751 aa33.15■■■□□ 2.9
HDAC3-201ENST00000305264 GRIN3BO60391 1043 aa33.15■■■□□ 2.9
HDAC3-201ENST00000305264 UQCRFS1P1P0C7P4 283 aa33.15■■■□□ 2.9
HDAC3-201ENST00000305264 DCAF8Q5TAQ9 597 aa33.15■■■□□ 2.9
HDAC3-201ENST00000305264 TDRD7Q8NHU6 1098 aaKnown RBP33.15■■■□□ 2.9
HDAC3-201ENST00000305264 BOLA2Q9H3K6 86 aa33.14■■■□□ 2.9
HDAC3-201ENST00000305264 NDUFB9Q9Y6M9 179 aa33.14■■■□□ 2.9
HDAC3-201ENST00000305264 AOX1Q06278 1338 aa33.14■■■□□ 2.89
HDAC3-201ENST00000305264 LMNB1P20700 586 aa33.12■■■□□ 2.89
HDAC3-201ENST00000305264 SNRKQ9NRH2 765 aa33.12■■■□□ 2.89
HDAC3-201ENST00000305264 HMG20BQ9P0W2 317 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms