RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
COL4A3-201ENST00000304990 ANKRD18AQ8IVF6 992 aa13.11□□□□□ -0.31
COL4A3-201ENST00000304990 ERO1AQ96HE7 468 aa13.11□□□□□ -0.31
COL4A3-201ENST00000304990 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
COL4A3-201ENST00000304990 CFHR5Q9BXR6 569 aa13.11□□□□□ -0.31
COL4A3-201ENST00000304990 R3HDMLQ9H3Y0 253 aa13.11□□□□□ -0.31
COL4A3-201ENST00000304990 DBF4Q9UBU7 674 aaPredicted RBP13.11□□□□□ -0.31
COL4A3-201ENST00000304990 MANSC4A6NHS7 340 aaPredicted RBP13.1□□□□□ -0.31
COL4A3-201ENST00000304990 SASH1O94885 1247 aa13.1□□□□□ -0.31
COL4A3-201ENST00000304990 ZEB1P37275 1124 aaPredicted RBP13.1□□□□□ -0.31
COL4A3-201ENST00000304990 INHBEP58166 350 aa13.1□□□□□ -0.31
COL4A3-201ENST00000304990 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
COL4A3-201ENST00000304990 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
COL4A3-201ENST00000304990 SPRYD7Q5W111 196 aa13.1□□□□□ -0.31
COL4A3-201ENST00000304990 OTOP1Q7RTM1 612 aa13.1□□□□□ -0.31
COL4A3-201ENST00000304990 APOBEC3FQ8IUX4 373 aaKnown RBP13.1□□□□□ -0.31
COL4A3-201ENST00000304990 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
COL4A3-201ENST00000304990 SLC10A4Q96EP9 437 aa13.1□□□□□ -0.31
COL4A3-201ENST00000304990 GMLQ99445 158 aa13.1□□□□□ -0.31
COL4A3-201ENST00000304990 WNT10BO00744 389 aa13.09□□□□□ -0.31
COL4A3-201ENST00000304990 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL4A3-201ENST00000304990 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
COL4A3-201ENST00000304990 OTUD7BQ6GQQ9 843 aa13.09□□□□□ -0.31
COL4A3-201ENST00000304990 IFNL1Q8IU54 200 aa13.09□□□□□ -0.31
COL4A3-201ENST00000304990 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
COL4A3-201ENST00000304990 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
COL4A3-201ENST00000304990 MYO3BQ8WXR4 1341 aa13.09□□□□□ -0.31
COL4A3-201ENST00000304990 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
COL4A3-201ENST00000304990 PTPN22Q9Y2R2 807 aa13.08□□□□□ -0.32
COL4A3-201ENST00000304990 PDE8AO60658 829 aa13.07□□□□□ -0.32
COL4A3-201ENST00000304990 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
COL4A3-201ENST00000304990 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
COL4A3-201ENST00000304990 CD99L2Q8TCZ2 262 aa13.07□□□□□ -0.32
COL4A3-201ENST00000304990 CDC5LQ99459 802 aaKnown RBP13.07□□□□□ -0.32
COL4A3-201ENST00000304990 MYD88Q99836 296 aa13.07□□□□□ -0.32
COL4A3-201ENST00000304990 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
COL4A3-201ENST00000304990 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
COL4A3-201ENST00000304990 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-201ENST00000304990 SLC4A8Q2Y0W8 1093 aa13.06□□□□□ -0.32
COL4A3-201ENST00000304990 DACT2Q5SW24 774 aa13.06□□□□□ -0.32
COL4A3-201ENST00000304990 KIAA0825Q8IV33 1275 aa13.06□□□□□ -0.32
COL4A3-201ENST00000304990 JARID2Q92833 1246 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-201ENST00000304990 FZD1Q9UP38 647 aa13.06□□□□□ -0.32
COL4A3-201ENST00000304990 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-201ENST00000304990 HOXB7P09629 217 aa13.05□□□□□ -0.32
COL4A3-201ENST00000304990 ZBTB48P10074 688 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-201ENST00000304990 MMP14P50281 582 aa13.05□□□□□ -0.32
COL4A3-201ENST00000304990 LDLRAD1Q5T700 205 aa13.05□□□□□ -0.32
COL4A3-201ENST00000304990 STRIP1Q5VSL9 837 aa13.05□□□□□ -0.32
COL4A3-201ENST00000304990 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
COL4A3-201ENST00000304990 WNK4Q96J92 1243 aa13.05□□□□□ -0.32
COL4A3-201ENST00000304990 CWC25Q9NXE8 425 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-201ENST00000304990 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
COL4A3-201ENST00000304990 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 MYH3P11055 1940 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 IGF2BP3O00425 579 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL4A3-201ENST00000304990 CHL1O00533 1208 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 PCCAP05165 728 aaPredicted RBP13.04□□□□□ -0.32
COL4A3-201ENST00000304990 SP3Q02447 781 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 CRHR2Q13324 411 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 ARHGEF6Q15052 776 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 TTLL5Q6EMB2 1281 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 COA1Q9GZY4 146 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 LAMB1P07942 1786 aa13.04□□□□□ -0.32
COL4A3-201ENST00000304990 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
COL4A3-201ENST00000304990 MYO1BO43795 1136 aa13.03□□□□□ -0.32
COL4A3-201ENST00000304990 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
COL4A3-201ENST00000304990 CCT4P50991 539 aaKnown RBP13.03□□□□□ -0.32
COL4A3-201ENST00000304990 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
COL4A3-201ENST00000304990 SLC9C1Q4G0N8 1177 aa13.03□□□□□ -0.32
COL4A3-201ENST00000304990 DUSP27Q5VZP5 1158 aa13.03□□□□□ -0.32
COL4A3-201ENST00000304990 ARMC5Q96C12 935 aa13.03□□□□□ -0.32
COL4A3-201ENST00000304990 CLMNQ96JQ2 1002 aa13.03□□□□□ -0.32
COL4A3-201ENST00000304990 DEFB129Q9H1M3 183 aa13.03□□□□□ -0.32
COL4A3-201ENST00000304990 KCNJ4P48050 445 aa13.02□□□□□ -0.33
COL4A3-201ENST00000304990 IREB2P48200 963 aaKnown RBP13.02□□□□□ -0.33
COL4A3-201ENST00000304990 GTF2IP78347 998 aa13.02□□□□□ -0.33
COL4A3-201ENST00000304990 SUPT20HL1Q3ZLR7 823 aa13.02□□□□□ -0.33
COL4A3-201ENST00000304990 CCDC146Q8IYE0 955 aa13.02□□□□□ -0.33
COL4A3-201ENST00000304990 MINPP1Q9UNW1 487 aa13.02□□□□□ -0.33
COL4A3-201ENST00000304990 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
COL4A3-201ENST00000304990 DDX58O95786 925 aaKnown RBP13.01□□□□□ -0.33
COL4A3-201ENST00000304990 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
COL4A3-201ENST00000304990 CTSWP56202 376 aa13.01□□□□□ -0.33
COL4A3-201ENST00000304990 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
COL4A3-201ENST00000304990 BSDC1Q9NW68 430 aaPredicted RBP13.01□□□□□ -0.33
COL4A3-201ENST00000304990 PPP2R3BQ9Y5P8 575 aa13.01□□□□□ -0.33
COL4A3-201ENST00000304990 H0YGN5 161 aa13□□□□□ -0.33
COL4A3-201ENST00000304990 MAP3K11Q16584 847 aa13□□□□□ -0.33
COL4A3-201ENST00000304990 VEZTQ9HBM0 779 aa13□□□□□ -0.33
COL4A3-201ENST00000304990 LEMD3Q9Y2U8 911 aa13□□□□□ -0.33
COL4A3-201ENST00000304990 ZNF804BA4D1E1 1349 aa12.99□□□□□ -0.33
COL4A3-201ENST00000304990 CLRN2A0PK11 232 aa12.99□□□□□ -0.33
COL4A3-201ENST00000304990 ABCB7O75027 752 aa12.99□□□□□ -0.33
COL4A3-201ENST00000304990 WDHD1O75717 1129 aaPredicted RBP12.99□□□□□ -0.33
COL4A3-201ENST00000304990 ANKRD13AQ8IZ07 590 aa12.99□□□□□ -0.33
COL4A3-201ENST00000304990 ZNF333Q96JL9 665 aa12.99□□□□□ -0.33
COL4A3-201ENST00000304990 ANKRD2Q9GZV1 360 aa12.99□□□□□ -0.33
COL4A3-201ENST00000304990 GREM2Q9H772 168 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms