RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 CHRNDQ07001 517 aa20.1■□□□□ 0.81
SRGAP2C-201ENST00000304465 TRPM4Q8TD43 1214 aa20.1■□□□□ 0.81
SRGAP2C-201ENST00000304465 ABT1Q9ULW3 272 aaKnown RBP20.1■□□□□ 0.81
SRGAP2C-201ENST00000304465 SHTN1A0MZ66 631 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 USP17L3A6NCW0 530 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 USP17L4A6NCW7 530 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 TBC1D10BQ4KMP7 808 aaPredicted RBP20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 EPHA10Q5JZY3 1008 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 RBM26Q5T8P6 1007 aaKnown RBP20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 LDHAL6AQ6ZMR3 332 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 USP17L1Q7RTZ2 530 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 SAMD7Q7Z3H4 446 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 COA1Q9GZY4 146 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 COG6Q9Y2V7 657 aa20.09■□□□□ 0.81
SRGAP2C-201ENST00000304465 WTIPA6NIX2 430 aaPredicted RBP20.08■□□□□ 0.81
SRGAP2C-201ENST00000304465 HIRAP54198 1017 aaPredicted RBP20.08■□□□□ 0.81
SRGAP2C-201ENST00000304465 AGBL3Q8NEM8 1001 aa20.08■□□□□ 0.81
SRGAP2C-201ENST00000304465 FBXW7Q969H0 707 aa20.08■□□□□ 0.81
SRGAP2C-201ENST00000304465 SUCLG2Q96I99 432 aa20.08■□□□□ 0.81
SRGAP2C-201ENST00000304465 CNNM1Q9NRU3 951 aa20.08■□□□□ 0.81
SRGAP2C-201ENST00000304465 SPEF2Q9C093 1822 aa20.07■□□□□ 0.8
SRGAP2C-201ENST00000304465 TRAF5O00463 557 aa20.07■□□□□ 0.8
SRGAP2C-201ENST00000304465 NBPF7P0C2Y1 421 aaPredicted RBP20.07■□□□□ 0.8
SRGAP2C-201ENST00000304465 CDC37L1Q7L3B6 337 aa20.07■□□□□ 0.8
SRGAP2C-201ENST00000304465 PGAP2Q9UHJ9 254 aa20.07■□□□□ 0.8
SRGAP2C-201ENST00000304465 CNTNAP1P78357 1384 aa20.07■□□□□ 0.8
SRGAP2C-201ENST00000304465 MS4A1P11836 297 aa20.06■□□□□ 0.8
SRGAP2C-201ENST00000304465 TMEM57Q8N5G2 664 aa20.06■□□□□ 0.8
SRGAP2C-201ENST00000304465 HELBQ8NG08 1087 aaPredicted RBP20.06■□□□□ 0.8
SRGAP2C-201ENST00000304465 GLIS2Q9BZE0 524 aaPredicted RBP20.06■□□□□ 0.8
SRGAP2C-201ENST00000304465 UTYO14607 1347 aa20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 MVPQ14764 893 aaKnown RBP20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 KIF4BQ2VIQ3 1234 aa20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 DEFB115Q30KQ5 88 aa20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 DCPSQ96C86 337 aaKnown RBP20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 ZNF594Q96JF6 807 aaPredicted RBP20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 TAF5LO75529 589 aa20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 USP17L8P0C7I0 530 aa20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 FMR1Q06787 632 aaKnown RBP eCLIP20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 API5Q9BZZ5 524 aaKnown RBP20.05■□□□□ 0.8
SRGAP2C-201ENST00000304465 PAXIP1Q6ZW49 1069 aaPredicted RBP20.04■□□□□ 0.8
SRGAP2C-201ENST00000304465 TXNRD3Q86VQ6 643 aa20.04■□□□□ 0.8
SRGAP2C-201ENST00000304465 FTSJ3Q8IY81 847 aaKnown RBP20.04■□□□□ 0.8
SRGAP2C-201ENST00000304465 OGFOD1Q8N543 542 aa20.04■□□□□ 0.8
SRGAP2C-201ENST00000304465 BICC1Q9H694 974 aaKnown RBP20.04■□□□□ 0.8
SRGAP2C-201ENST00000304465 ZNF408Q9H9D4 720 aa20.04■□□□□ 0.8
SRGAP2C-201ENST00000304465 MYO3BQ8WXR4 1341 aa20.03■□□□□ 0.8
SRGAP2C-201ENST00000304465 CELF2O95319 508 aaKnown RBP20.03■□□□□ 0.8
SRGAP2C-201ENST00000304465 STRIP1Q5VSL9 837 aa20.03■□□□□ 0.8
SRGAP2C-201ENST00000304465 B4GALNT3Q6L9W6 998 aa20.03■□□□□ 0.8
SRGAP2C-201ENST00000304465 RASSF10A6NK89 507 aa20.02■□□□□ 0.8
SRGAP2C-201ENST00000304465 EGFRP00533 1210 aa20.02■□□□□ 0.8
SRGAP2C-201ENST00000304465 KLRK1P26718 216 aa20.02■□□□□ 0.8
SRGAP2C-201ENST00000304465 TTLL5Q6EMB2 1281 aa20.02■□□□□ 0.8
SRGAP2C-201ENST00000304465 KRT26Q7Z3Y9 468 aa20.02■□□□□ 0.8
SRGAP2C-201ENST00000304465 ZNF804AQ7Z570 1209 aa20.02■□□□□ 0.8
SRGAP2C-201ENST00000304465 USP48Q86UV5 1035 aa20.02■□□□□ 0.8
SRGAP2C-201ENST00000304465 KAZALD1Q96I82 304 aa20.02■□□□□ 0.8
SRGAP2C-201ENST00000304465 ZNF609O15014 1411 aa20.02■□□□□ 0.79
SRGAP2C-201ENST00000304465 SCN9AQ15858 1988 aa20.01■□□□□ 0.79
SRGAP2C-201ENST00000304465 VEGFBP49765 207 aa20.01■□□□□ 0.79
SRGAP2C-201ENST00000304465 ZNF280AP59817 542 aaPredicted RBP20.01■□□□□ 0.79
SRGAP2C-201ENST00000304465 CST9Q5W186 159 aa20.01■□□□□ 0.79
SRGAP2C-201ENST00000304465 SULF1Q8IWU6 871 aa20.01■□□□□ 0.79
SRGAP2C-201ENST00000304465 USP44Q9H0E7 712 aa20.01■□□□□ 0.79
SRGAP2C-201ENST00000304465 SNAP23O00161 211 aa20■□□□□ 0.79
SRGAP2C-201ENST00000304465 HSPA1AP0DMV8 641 aaKnown RBP20■□□□□ 0.79
SRGAP2C-201ENST00000304465 HSPA1BP0DMV9 641 aaKnown RBP20■□□□□ 0.79
SRGAP2C-201ENST00000304465 RABL6Q3YEC7 729 aaPredicted RBP20■□□□□ 0.79
SRGAP2C-201ENST00000304465 DACT2Q5SW24 774 aa20■□□□□ 0.79
SRGAP2C-201ENST00000304465 INTS3Q68E01 1043 aaKnown RBP20■□□□□ 0.79
SRGAP2C-201ENST00000304465 C15orf52Q6ZUT6 534 aaKnown RBP20■□□□□ 0.79
SRGAP2C-201ENST00000304465 GMLQ99445 158 aa20■□□□□ 0.79
SRGAP2C-201ENST00000304465 CD209Q9NNX6 404 aa20■□□□□ 0.79
SRGAP2C-201ENST00000304465 MYOZ2Q9NPC6 264 aa20■□□□□ 0.79
SRGAP2C-201ENST00000304465 GGA3Q9NZ52 723 aa20■□□□□ 0.79
SRGAP2C-201ENST00000304465 ECE1P42892 770 aa19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 GTF2IP78347 998 aa19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 HDAC5Q9UQL6 1122 aa19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 MROH5Q6ZUA9 1318 aa19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 UBTFL1P0CB47 393 aaPredicted RBP19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 GRM1Q13255 1194 aa19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 SCARF1Q14162 830 aa19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 HDAC9Q9UKV0 1011 aa19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 TLL2Q9Y6L7 1015 aa19.99■□□□□ 0.79
SRGAP2C-201ENST00000304465 MMP14P50281 582 aa19.98■□□□□ 0.79
SRGAP2C-201ENST00000304465 ITPRIPQ8IWB1 547 aa19.98■□□□□ 0.79
SRGAP2C-201ENST00000304465 ANKRD44Q8N8A2 993 aa19.98■□□□□ 0.79
SRGAP2C-201ENST00000304465 MXD3Q9BW11 206 aa19.98■□□□□ 0.79
SRGAP2C-201ENST00000304465 DDX19BQ9UMR2 479 aa19.98■□□□□ 0.79
SRGAP2C-201ENST00000304465 WDR33Q9C0J8 1336 aaKnown RBP19.97■□□□□ 0.79
SRGAP2C-201ENST00000304465 ZBTB7BO15156 539 aaPredicted RBP19.97■□□□□ 0.79
SRGAP2C-201ENST00000304465 AAMPQ13685 434 aa19.97■□□□□ 0.79
SRGAP2C-201ENST00000304465 UBE4AQ14139 1066 aa19.97■□□□□ 0.79
SRGAP2C-201ENST00000304465 METTL24Q5JXM2 366 aa19.97■□□□□ 0.79
SRGAP2C-201ENST00000304465 ANGEL2Q5VTE6 544 aaKnown RBP19.97■□□□□ 0.79
SRGAP2C-201ENST00000304465 AIDAQ96BJ3 306 aa19.97■□□□□ 0.79
SRGAP2C-201ENST00000304465 PUS3Q9BZE2 481 aaKnown RBP19.97■□□□□ 0.79
SRGAP2C-201ENST00000304465 ZBTB40Q9NUA8 1239 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms