RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 DESI2Q9BSY9 194 aa12.71□□□□□ -0.37
SNX20-201ENST00000300590 IRX2Q9BZI1 471 aaPredicted RBP12.71□□□□□ -0.37
SNX20-201ENST00000300590 PDE11AQ9HCR9 933 aa12.71□□□□□ -0.37
SNX20-201ENST00000300590 CLIC4Q9Y696 253 aa12.71□□□□□ -0.37
SNX20-201ENST00000300590 GIGYF1O75420 1035 aaPredicted RBP12.71□□□□□ -0.38
SNX20-201ENST00000300590 MARCKSP29966 332 aaPredicted RBP12.71□□□□□ -0.38
SNX20-201ENST00000300590 MUM1L1Q5H9M0 696 aa12.71□□□□□ -0.38
SNX20-201ENST00000300590 SRLQ86TD4 932 aa12.71□□□□□ -0.38
SNX20-201ENST00000300590 ERC1Q8IUD2 1116 aa12.71□□□□□ -0.38
SNX20-201ENST00000300590 FMR1NBQ8N0W7 255 aaPredicted RBP12.71□□□□□ -0.38
SNX20-201ENST00000300590 NSUN7Q8NE18 718 aaKnown RBP12.71□□□□□ -0.38
SNX20-201ENST00000300590 DRC1Q96MC2 740 aa12.71□□□□□ -0.38
SNX20-201ENST00000300590 SUGCTQ9HAC7 445 aa12.71□□□□□ -0.38
SNX20-201ENST00000300590 MAP3K2Q9Y2U5 619 aa12.71□□□□□ -0.38
SNX20-201ENST00000300590 SIGLEC1Q9BZZ2 1709 aa12.71□□□□□ -0.38
SNX20-201ENST00000300590 CYP21A2P08686 494 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
SNX20-201ENST00000300590 STK11IPQ8N1F8 1099 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 FBXO18Q8NFZ0 1043 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 LOC102724159A0A0B4J2E5 919 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 N4BP1O75113 896 aaKnown RBP12.7□□□□□ -0.38
SNX20-201ENST00000300590 PWP2Q15269 919 aaKnown RBP12.7□□□□□ -0.38
SNX20-201ENST00000300590 LONRF2Q1L5Z9 754 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 TTLL5Q6EMB2 1281 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 C14orf37Q86TY3 774 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 PIK3C2BO00750 1634 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 ADKP55263 362 aaKnown RBP12.7□□□□□ -0.38
SNX20-201ENST00000300590 CCDC12Q8WUD4 166 aaPredicted RBP12.7□□□□□ -0.38
SNX20-201ENST00000300590 FUT8Q9BYC5 575 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 HDAC5Q9UQL6 1122 aa12.7□□□□□ -0.38
SNX20-201ENST00000300590 GOLGA5Q8TBA6 731 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 DHX58Q96C10 678 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 PPP2R2CQ9Y2T4 447 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 ARAP3Q8WWN8 1544 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 TUBGCP6Q96RT7 1819 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 A0A0G2JLW4 131 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 ZNF202O95125 648 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 TPM1P09493 284 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 ACTN2P35609 894 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 NOP2P46087 812 aaKnown RBP12.69□□□□□ -0.38
SNX20-201ENST00000300590 DDX46Q7L014 1031 aaKnown RBP12.69□□□□□ -0.38
SNX20-201ENST00000300590 GPR161Q8N6U8 529 aaKnown RBP12.69□□□□□ -0.38
SNX20-201ENST00000300590 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 SRRTQ9BXP5 876 aaKnown RBP12.69□□□□□ -0.38
SNX20-201ENST00000300590 LGR6Q9HBX8 967 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 ALKQ9UM73 1620 aa12.69□□□□□ -0.38
SNX20-201ENST00000300590 VWA3AA6NCI4 1184 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 MTX1Q13505 466 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 ABCA9Q8IUA7 1624 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 NPHP4O75161 1426 aaPredicted RBP12.68□□□□□ -0.38
SNX20-201ENST00000300590 CCP110O43303 1012 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 KRT32Q14532 448 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 SART3Q15020 963 aaKnown RBP12.68□□□□□ -0.38
SNX20-201ENST00000300590 BICC1Q9H694 974 aaKnown RBP12.68□□□□□ -0.38
SNX20-201ENST00000300590 LZTFL1Q9NQ48 299 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 USP42Q9H9J4 1324 aaKnown RBP12.68□□□□□ -0.38
SNX20-201ENST00000300590 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 TFRCP02786 760 aaKnown RBP12.68□□□□□ -0.38
SNX20-201ENST00000300590 NCAPHQ15003 741 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 E2F4Q16254 413 aa12.68□□□□□ -0.38
SNX20-201ENST00000300590 ILDR1Q86SU0 546 aaPredicted RBP12.68□□□□□ -0.38
SNX20-201ENST00000300590 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
SNX20-201ENST00000300590 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 RHOXF2BP0C7M4 288 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 SUCLG2Q96I99 432 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 RHOXF2Q9BQY4 288 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 ADALQ6DHV7 355 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 TOGARAM2Q6ZUX3 1019 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 FANCLQ9NW38 375 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 FAN1Q9Y2M0 1017 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 METP08581 1390 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 NLRP12P59046 1061 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 SYNE3Q6ZMZ3 975 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 NGDNQ8NEJ9 315 aaKnown RBP12.67□□□□□ -0.38
SNX20-201ENST00000300590 CPLX3Q8WVH0 158 aa12.67□□□□□ -0.38
SNX20-201ENST00000300590 RIMS1Q86UR5 1692 aaKnown RBP12.66□□□□□ -0.38
SNX20-201ENST00000300590 SPTLC2O15270 562 aa12.66□□□□□ -0.38
SNX20-201ENST00000300590 ICE2Q659A1 982 aa12.66□□□□□ -0.38
SNX20-201ENST00000300590 NAA16Q6N069 864 aaPredicted RBP12.66□□□□□ -0.38
SNX20-201ENST00000300590 GOLGA1Q92805 767 aa12.66□□□□□ -0.38
SNX20-201ENST00000300590 EXOC4Q96A65 974 aa12.66□□□□□ -0.38
SNX20-201ENST00000300590 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
SNX20-201ENST00000300590 NLRP6P59044 892 aa12.66□□□□□ -0.38
SNX20-201ENST00000300590 TTC31Q49AM3 519 aaPredicted RBP12.66□□□□□ -0.38
SNX20-201ENST00000300590 BAG1Q99933 345 aaPredicted RBP12.66□□□□□ -0.38
SNX20-201ENST00000300590 PREX1Q8TCU6 1659 aa12.66□□□□□ -0.38
SNX20-201ENST00000300590 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
SNX20-201ENST00000300590 PNOCQ13519 176 aa12.65□□□□□ -0.38
SNX20-201ENST00000300590 NOM1Q5C9Z4 860 aaKnown RBP12.65□□□□□ -0.38
SNX20-201ENST00000300590 JAKMIP3Q5VZ66 844 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms