RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 AATFQ9NY61 560 aaKnown RBP eCLIP11.9□□□□□ -0.5
GABRB3-201ENST00000299267 GPAA1O43292 621 aa11.9□□□□□ -0.51
GABRB3-201ENST00000299267 ERFEQ4G0M1 354 aa11.9□□□□□ -0.51
GABRB3-201ENST00000299267 HMG20BQ9P0W2 317 aa11.9□□□□□ -0.51
GABRB3-201ENST00000299267 GGA1Q9UJY5 639 aa11.9□□□□□ -0.51
GABRB3-201ENST00000299267 DPP8Q6V1X1 898 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-201ENST00000299267 KBTBD3Q8NAB2 608 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
GABRB3-201ENST00000299267 SYCE3A1L190 88 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 B4E1Z4 1266 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 H0YIN7 160 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 TSPY3P0CV98 308 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 TSPY8P0CW00 308 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 CCDC196A0A1B0GTZ2 297 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 PHKA1P46020 1223 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 NBPF10Q6P3W6 841 aaKnown RBP11.89□□□□□ -0.51
GABRB3-201ENST00000299267 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 JDP2Q8WYK2 163 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 KAT14Q9H8E8 782 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 CFAP45Q9UL16 551 aa11.89□□□□□ -0.51
GABRB3-201ENST00000299267 CEP170BQ9Y4F5 1589 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-201ENST00000299267 SGSM2O43147 1006 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 TRIM5Q9C035 493 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 SEC63Q9UGP8 760 aaKnown RBP11.88□□□□□ -0.51
GABRB3-201ENST00000299267 MYO3AQ8NEV4 1616 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 ZBTB43O43298 467 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 NLRP5P59047 1200 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 SSRP1Q08945 709 aaKnown RBP11.88□□□□□ -0.51
GABRB3-201ENST00000299267 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-201ENST00000299267 A0A0D9SFI3 127 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 ESR2Q92731 530 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 ZNF76P36508 570 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 EIF6P56537 245 aaKnown RBP11.88□□□□□ -0.51
GABRB3-201ENST00000299267 ZNF772Q68DY9 489 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-201ENST00000299267 TTLL5Q6EMB2 1281 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 SPATA5Q8NB90 893 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
GABRB3-201ENST00000299267 ZNF532Q9HCE3 1301 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 KRT18P05783 430 aaKnown RBP11.87□□□□□ -0.51
GABRB3-201ENST00000299267 HLA-DOAP06340 250 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 GTF2IP78347 998 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 CHRNDQ07001 517 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 IFIT1BQ5T764 474 aaKnown RBP11.87□□□□□ -0.51
GABRB3-201ENST00000299267 CCDC102BQ68D86 513 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 PDILTQ8N807 584 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 ZNF592Q92610 1267 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 ANTXR1Q9H6X2 564 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 ERBB4Q15303 1308 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 TCP10Q12799 353 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 CKAP2LQ8IYA6 745 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 NCOA5Q9HCD5 579 aaKnown RBP11.87□□□□□ -0.51
GABRB3-201ENST00000299267 SPATA31D1Q6ZQQ2 1576 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 LRRC7Q96NW7 1537 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 OVOS2A0A0J9YW53 1432 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 TXLNAP40222 546 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 GSTO1P78417 241 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 OVOS2Q6IE36 1432 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 OLFM4Q6UX06 510 aa11.87□□□□□ -0.51
GABRB3-201ENST00000299267 MARCH10Q8NA82 808 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-201ENST00000299267 NOL7Q9UMY1 257 aaKnown RBP11.87□□□□□ -0.51
GABRB3-201ENST00000299267 PTH1RQ03431 593 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 GPR101Q96P66 508 aaPredicted RBP11.86□□□□□ -0.51
GABRB3-201ENST00000299267 DENND2AQ9ULE3 1009 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 TMEM131LA2VDJ0 1609 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 SERPINB2P05120 415 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 HMGN5P82970 282 aaKnown RBP11.86□□□□□ -0.51
GABRB3-201ENST00000299267 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
GABRB3-201ENST00000299267 TEX11Q8IYF3 940 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 LARGE2Q8N3Y3 721 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
GABRB3-201ENST00000299267 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 CHMP4BP1P59074 171 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 GRM1Q13255 1194 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 TSR1Q2NL82 804 aaKnown RBP11.86□□□□□ -0.51
GABRB3-201ENST00000299267 SLFNL1Q499Z3 407 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 WASF1Q92558 559 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 APPBP2Q92624 585 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 BRPF3Q9ULD4 1205 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 DIP2AQ14689 1571 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 NRXN1Q9ULB1 1477 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 BAG4O95429 457 aaKnown RBP11.86□□□□□ -0.51
GABRB3-201ENST00000299267 ATP5JP18859 108 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 CTDSPL2Q05D32 466 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 TSPY26PQ9H489 355 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
GABRB3-201ENST00000299267 PALD1Q9ULE6 856 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
GABRB3-201ENST00000299267 SLC27A2O14975 620 aa11.85□□□□□ -0.51
GABRB3-201ENST00000299267 SASH1O94885 1247 aa11.85□□□□□ -0.51
GABRB3-201ENST00000299267 PDE8BO95263 885 aa11.85□□□□□ -0.51
GABRB3-201ENST00000299267 CABP5Q9NP86 173 aa11.85□□□□□ -0.51
GABRB3-201ENST00000299267 SNX14Q9Y5W7 946 aa11.85□□□□□ -0.51
GABRB3-201ENST00000299267 IBTKQ9P2D0 1353 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms