RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TRPM3Q9HCF6 1732 aaPredicted RBP22.41■■□□□ 1.18
TRA2A-201ENST00000297071 PTPN12Q05209 780 aaKnown RBP22.41■■□□□ 1.18
TRA2A-201ENST00000297071 KRT222Q8N1A0 295 aa22.41■■□□□ 1.18
TRA2A-201ENST00000297071 RTEL1Q9NZ71 1219 aa22.41■■□□□ 1.18
TRA2A-201ENST00000297071 ADALQ6DHV7 355 aa22.4■■□□□ 1.18
TRA2A-201ENST00000297071 GOLPH3LQ9H4A5 285 aa22.4■■□□□ 1.18
TRA2A-201ENST00000297071 L2HGDHQ9H9P8 463 aa22.4■■□□□ 1.18
TRA2A-201ENST00000297071 SLU7O95391 586 aaKnown RBP22.39■■□□□ 1.17
TRA2A-201ENST00000297071 CTDNEP1O95476 244 aa22.39■■□□□ 1.17
TRA2A-201ENST00000297071 FMR1NBQ8N0W7 255 aaPredicted RBP22.39■■□□□ 1.17
TRA2A-201ENST00000297071 MST1RQ04912 1400 aa22.39■■□□□ 1.17
TRA2A-201ENST00000297071 RGPD5Q99666 1765 aa22.39■■□□□ 1.17
TRA2A-201ENST00000297071 PTPDC1A2A3K4 754 aa22.38■■□□□ 1.17
TRA2A-201ENST00000297071 MRPS27Q92552 414 aaKnown RBP22.38■■□□□ 1.17
TRA2A-201ENST00000297071 USP28Q96RU2 1077 aa22.38■■□□□ 1.17
TRA2A-201ENST00000297071 SIL1Q9H173 461 aa22.38■■□□□ 1.17
TRA2A-201ENST00000297071 YEATS4O95619 227 aa22.37■■□□□ 1.17
TRA2A-201ENST00000297071 STOX1Q6ZVD7 989 aa22.37■■□□□ 1.17
TRA2A-201ENST00000297071 FSIP1Q8NA03 581 aa22.37■■□□□ 1.17
TRA2A-201ENST00000297071 CCP110O43303 1012 aa22.36■■□□□ 1.17
TRA2A-201ENST00000297071 SLFN14P0C7P3 912 aa22.36■■□□□ 1.17
TRA2A-201ENST00000297071 EPHA10Q5JZY3 1008 aa22.36■■□□□ 1.17
TRA2A-201ENST00000297071 C14orf37Q86TY3 774 aa22.36■■□□□ 1.17
TRA2A-201ENST00000297071 LRRC59Q96AG4 307 aaKnown RBP22.36■■□□□ 1.17
TRA2A-201ENST00000297071 DDX11Q96FC9 970 aa22.36■■□□□ 1.17
TRA2A-201ENST00000297071 ZNF215Q9UL58 517 aaPredicted RBP22.36■■□□□ 1.17
TRA2A-201ENST00000297071 NRDCO43847 1150 aa22.36■■□□□ 1.17
TRA2A-201ENST00000297071 USP27XA6NNY8 438 aa22.35■■□□□ 1.17
TRA2A-201ENST00000297071 FGD1P98174 961 aa22.35■■□□□ 1.17
TRA2A-201ENST00000297071 TFCP2Q12800 502 aa22.35■■□□□ 1.17
TRA2A-201ENST00000297071 ZNF790Q6PG37 636 aa22.35■■□□□ 1.17
TRA2A-201ENST00000297071 NBPF11Q86T75 865 aa22.35■■□□□ 1.17
TRA2A-201ENST00000297071 KCNG4Q8TDN1 519 aa22.35■■□□□ 1.17
TRA2A-201ENST00000297071 PRAMEF22A3QJZ6 481 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 TPM4P67936 248 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 KMT5BQ4FZB7 885 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 ZMYM1Q5SVZ6 1142 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 LRP10Q7Z4F1 713 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.34■■□□□ 1.17
TRA2A-201ENST00000297071 CARMIL3Q8ND23 1372 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 MYH7P12883 1935 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 MYO1BO43795 1136 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 ANKRD24Q8TF21 1146 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 EDC3Q96F86 508 aaKnown RBP22.34■■□□□ 1.17
TRA2A-201ENST00000297071 POLR3EQ9NVU0 708 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 KIAA1468Q9P260 1216 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 USP16Q9Y5T5 823 aa22.34■■□□□ 1.17
TRA2A-201ENST00000297071 PARP4Q9UKK3 1724 aaKnown RBP22.33■■□□□ 1.17
TRA2A-201ENST00000297071 C4AP0C0L4 1744 aa22.33■■□□□ 1.16
TRA2A-201ENST00000297071 C4BP0C0L5 1744 aa22.33■■□□□ 1.16
TRA2A-201ENST00000297071 TERF2Q15554 542 aa22.33■■□□□ 1.16
TRA2A-201ENST00000297071 CCDC93Q567U6 631 aa22.33■■□□□ 1.16
TRA2A-201ENST00000297071 NUP188Q5SRE5 1749 aa22.33■■□□□ 1.16
TRA2A-201ENST00000297071 AOPEPQ8N6M6 819 aa22.33■■□□□ 1.16
TRA2A-201ENST00000297071 XAGE3Q8WTP9 111 aa22.33■■□□□ 1.16
TRA2A-201ENST00000297071 MYD88Q99836 296 aa22.33■■□□□ 1.16
TRA2A-201ENST00000297071 NWD2Q9ULI1 1742 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 GCP02774 474 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 PDIA3P30101 505 aaKnown RBP22.32■■□□□ 1.16
TRA2A-201ENST00000297071 PSME1Q06323 249 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 AIMP1Q12904 312 aaKnown RBP22.32■■□□□ 1.16
TRA2A-201ENST00000297071 ARID5BQ14865 1188 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 ANKRD13DQ6ZTN6 518 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 BRAPQ7Z569 592 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 DBNDD2Q9BQY9 259 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 SLC52A2Q9HAB3 445 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.32■■□□□ 1.166e-10■■■■□ 23.3
TRA2A-201ENST00000297071 PCDHA7Q9UN72 937 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 PKD1L3Q7Z443 1732 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 STRCQ7RTU9 1775 aa22.32■■□□□ 1.16
TRA2A-201ENST00000297071 IKBKBO14920 756 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 H2AFXP16104 143 aaPredicted RBP22.31■■□□□ 1.16
TRA2A-201ENST00000297071 ME1P48163 572 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 CASP7P55210 303 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 ZNF771Q7L3S4 317 aaPredicted RBP22.31■■□□□ 1.16
TRA2A-201ENST00000297071 KLHDC4Q8TBB5 520 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 ZNF592Q92610 1267 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 TIGD1Q96MW7 591 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 ERBB3P21860 1342 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 TJP1Q07157 1748 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
TRA2A-201ENST00000297071 NLRP12P59046 1061 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 APOBRQ0VD83 1088 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 NAA30Q147X3 362 aaPredicted RBP22.31■■□□□ 1.16
TRA2A-201ENST00000297071 CCDC129Q6ZRS4 1044 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 FILIP1Q7Z7B0 1213 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 LINC00301Q8NCQ3 95 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 WDR19Q8NEZ3 1342 aa22.31■■□□□ 1.16
TRA2A-201ENST00000297071 ZNF142P52746 1687 aaPredicted RBP22.3■■□□□ 1.16
TRA2A-201ENST00000297071 KDM6AO15550 1401 aaPredicted RBP22.3■■□□□ 1.16
TRA2A-201ENST00000297071 E7EWF7 191 aa22.3■■□□□ 1.16
TRA2A-201ENST00000297071 SEC62Q99442 399 aaKnown RBP22.3■■□□□ 1.16
TRA2A-201ENST00000297071 BMS1Q14692 1282 aaKnown RBP22.29■■□□□ 1.16
TRA2A-201ENST00000297071 E4F1Q66K89 784 aaPredicted RBP22.29■■□□□ 1.16
TRA2A-201ENST00000297071 FBXO38Q6PIJ6 1188 aa22.29■■□□□ 1.16
TRA2A-201ENST00000297071 SRRTQ9BXP5 876 aaKnown RBP22.29■■□□□ 1.16
TRA2A-201ENST00000297071 PHLPP2Q6ZVD8 1323 aa22.29■■□□□ 1.16
TRA2A-201ENST00000297071 GLI3P10071 1580 aa22.29■■□□□ 1.16
TRA2A-201ENST00000297071 LTBP4Q8N2S1 1624 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms