RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 MCMDC2Q4G0Z9 681 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 TAF7LQ5H9L4 462 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 BARGINQ6ZT62 677 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 RUFY3Q7L099 469 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 KBTBD3Q8NAB2 608 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 SYTL4Q96C24 671 aaPredicted RBP11.08□□□□□ -0.64
CLRN1-201ENST00000295911 AK7Q96M32 723 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
CLRN1-201ENST00000295911 ALDH8A1Q9H2A2 487 aaPredicted RBP11.08□□□□□ -0.64
CLRN1-201ENST00000295911 PDRG1Q9NUG6 133 aa11.08□□□□□ -0.64
CLRN1-201ENST00000295911 SPATA31A5Q5VU36 1347 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 SPATA31A7Q8IWB4 1347 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 TCHHQ07283 1943 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 ADAMTS2O95450 1211 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 BRD1O95696 1058 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 AK2P54819 239 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 KLHL40Q2TBA0 621 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 USPL1Q5W0Q7 1092 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 MCTP1Q6DN14 999 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 ARXQ96QS3 562 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 HELLSQ9NRZ9 838 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 ZDHHC9Q9Y397 364 aa11.07□□□□□ -0.64
CLRN1-201ENST00000295911 LAMA4Q16363 1823 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 SH3TC1Q8TE82 1336 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 WDR33Q9C0J8 1336 aaKnown RBP11.06□□□□□ -0.64
CLRN1-201ENST00000295911 ABCC12Q96J65 1359 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 RPAP1Q9BWH6 1393 aaPredicted RBP11.06□□□□□ -0.64
CLRN1-201ENST00000295911 FSD2A1L4K1 749 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 SLC27A2O14975 620 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 TAF5LO75529 589 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 TIMM10P62072 90 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 LRRC24Q50LG9 513 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 CCDC158Q5M9N0 1113 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 FAM89AQ96GI7 184 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 DNAJC2Q99543 621 aaKnown RBP11.06□□□□□ -0.64
CLRN1-201ENST00000295911 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
CLRN1-201ENST00000295911 PAG1Q9NWQ8 432 aa11.06□□□□□ -0.64
CLRN1-201ENST00000295911 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 PDE8AO60658 829 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 SLC34A2O95436 690 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 IFIT1P09914 478 aaKnown RBP11.05□□□□□ -0.64
CLRN1-201ENST00000295911 HSP90B1P14625 803 aaKnown RBP11.05□□□□□ -0.64
CLRN1-201ENST00000295911 PKP1Q13835 747 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 HLFQ16534 295 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 BLOC1S2Q6QNY1 142 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 NOL8Q76FK4 1167 aaKnown RBP11.05□□□□□ -0.64
CLRN1-201ENST00000295911 DZIP3Q86Y13 1208 aaKnown RBP11.05□□□□□ -0.64
CLRN1-201ENST00000295911 SMARCC1Q92922 1105 aaPredicted RBP11.05□□□□□ -0.64
CLRN1-201ENST00000295911 ZNF594Q96JF6 807 aaPredicted RBP11.05□□□□□ -0.64
CLRN1-201ENST00000295911 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 DDX49Q9Y6V7 483 aaKnown RBP11.05□□□□□ -0.64
CLRN1-201ENST00000295911 SLIT2O94813 1529 aa11.05□□□□□ -0.64
CLRN1-201ENST00000295911 LAMB2P55268 1798 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 NUDT7P0C024 238 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 MRE11P49959 708 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 CTSWP56202 376 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 ADCK5Q3MIX3 580 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 GORABQ5T7V8 394 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 ZNF34Q8IZ26 560 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 ZNF687Q8N1G0 1237 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 TTLL11Q8NHH1 800 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 LMBRD1Q9NUN5 540 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 CCDC87Q9NVE4 849 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 TRMT112Q9UI30 125 aaKnown RBP11.04□□□□□ -0.64
CLRN1-201ENST00000295911 SMC3Q9UQE7 1217 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 PCDHGA4Q9Y5G9 962 aa11.04□□□□□ -0.64
CLRN1-201ENST00000295911 COL5A3P25940 1745 aaPredicted RBP11.04□□□□□ -0.64
CLRN1-201ENST00000295911 AKAP11Q9UKA4 1901 aa11.03□□□□□ -0.64
CLRN1-201ENST00000295911 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
CLRN1-201ENST00000295911 GOLIM4O00461 696 aa11.03□□□□□ -0.64
CLRN1-201ENST00000295911 IRS4O14654 1257 aaPredicted RBP11.03□□□□□ -0.64
CLRN1-201ENST00000295911 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
CLRN1-201ENST00000295911 HMGB1P09429 215 aaKnown RBP11.03□□□□□ -0.64
CLRN1-201ENST00000295911 RPS6KB1P23443 525 aa11.03□□□□□ -0.64
CLRN1-201ENST00000295911 EIF5P55010 431 aaKnown RBP11.03□□□□□ -0.64
CLRN1-201ENST00000295911 TTC39AQ5SRH9 613 aa11.03□□□□□ -0.64
CLRN1-201ENST00000295911 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
CLRN1-201ENST00000295911 EDC3Q96F86 508 aaKnown RBP11.03□□□□□ -0.64
CLRN1-201ENST00000295911 DSCC1Q9BVC3 393 aa11.03□□□□□ -0.64
CLRN1-201ENST00000295911 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
CLRN1-201ENST00000295911 ATP6V1DQ9Y5K8 247 aa11.03□□□□□ -0.64
CLRN1-201ENST00000295911 ARAP2Q8WZ64 1704 aa11.03□□□□□ -0.64
CLRN1-201ENST00000295911 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.64
CLRN1-201ENST00000295911 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.64
CLRN1-201ENST00000295911 RNF113AO15541 343 aaKnown RBP11.02□□□□□ -0.64
CLRN1-201ENST00000295911 MBD3O95983 291 aa11.02□□□□□ -0.64
CLRN1-201ENST00000295911 ITGA6P23229 1130 aa11.02□□□□□ -0.64
CLRN1-201ENST00000295911 GPTP24298 496 aa11.02□□□□□ -0.64
CLRN1-201ENST00000295911 ATP6V1AP38606 617 aa11.02□□□□□ -0.64
CLRN1-201ENST00000295911 PARP10Q53GL7 1025 aa11.02□□□□□ -0.64
CLRN1-201ENST00000295911 ZMYM1Q5SVZ6 1142 aa11.02□□□□□ -0.64
CLRN1-201ENST00000295911 LDHAL6AQ6ZMR3 332 aa11.02□□□□□ -0.64
CLRN1-201ENST00000295911 ZNF589Q86UQ0 364 aaPredicted RBP11.02□□□□□ -0.64
CLRN1-201ENST00000295911 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.64
CLRN1-201ENST00000295911 MARCH10Q8NA82 808 aaPredicted RBP11.02□□□□□ -0.64
CLRN1-201ENST00000295911 XAGE2Q96GT9 111 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms