RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 SMTNL1A8MU46 457 aa18.02■□□□□ 0.47
LRRTM1-201ENST00000295057 CDK11BP21127 795 aaKnown RBP18.02■□□□□ 0.47
LRRTM1-201ENST00000295057 ATP6V1AP38606 617 aa18.02■□□□□ 0.47
LRRTM1-201ENST00000295057 ATG9AQ7Z3C6 839 aa18.02■□□□□ 0.47
LRRTM1-201ENST00000295057 TTC6Q86TZ1 520 aa18.02■□□□□ 0.47
LRRTM1-201ENST00000295057 CDCA7Q9BWT1 371 aaPredicted RBP18.02■□□□□ 0.47
LRRTM1-201ENST00000295057 DOT1LQ8TEK3 1739 aa18.02■□□□□ 0.47
LRRTM1-201ENST00000295057 TJP1Q07157 1748 aa18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 ST3GAL1Q11201 340 aa18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 FERMT3Q86UX7 667 aa18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 ITPK1Q13572 414 aa18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 ADCK5Q3MIX3 580 aa18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 ZSCAN25Q6NSZ9 544 aa18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 FAM227BQ96M60 508 aa18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 CBX8Q9HC52 389 aa18.01■□□□□ 0.47
LRRTM1-201ENST00000295057 TIMM10P62072 90 aa18■□□□□ 0.47
LRRTM1-201ENST00000295057 MAP3K11Q16584 847 aa18■□□□□ 0.47
LRRTM1-201ENST00000295057 ANO6Q4KMQ2 910 aa18■□□□□ 0.47
LRRTM1-201ENST00000295057 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
LRRTM1-201ENST00000295057 NECAB1Q8N987 351 aa18■□□□□ 0.47
LRRTM1-201ENST00000295057 DDX41Q9UJV9 622 aaKnown RBP18■□□□□ 0.47
LRRTM1-201ENST00000295057 COL15A1P39059 1388 aa18■□□□□ 0.47
LRRTM1-201ENST00000295057 NUP62CLQ9H1M0 184 aa18■□□□□ 0.47
LRRTM1-201ENST00000295057 WNK3Q9BYP7 1800 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 SLFN14P0C7P3 912 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 GABPB1Q06547 395 aaPredicted RBP17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 NEUROD6Q96NK8 337 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 LOC102724428A0A0B4J2F2 783 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 SIK1P57059 783 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 INTS5Q6P9B9 1019 aaKnown RBP17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 BARGINQ6ZT62 677 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 DZIP3Q86Y13 1208 aaKnown RBP17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 ZNF592Q92610 1267 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 TRIM5Q9C035 493 aa17.99■□□□□ 0.47
LRRTM1-201ENST00000295057 BCL9LQ86UU0 1499 aa17.98■□□□□ 0.47
LRRTM1-201ENST00000295057 EPB41L2O43491 1005 aaKnown RBP17.98■□□□□ 0.47
LRRTM1-201ENST00000295057 PTH1RQ03431 593 aa17.98■□□□□ 0.47
LRRTM1-201ENST00000295057 CCDC112Q8NEF3 446 aa17.98■□□□□ 0.47
LRRTM1-201ENST00000295057 EP400Q96L91 3159 aa17.98■□□□□ 0.47
LRRTM1-201ENST00000295057 CACTINQ8WUQ7 758 aaKnown RBP17.98■□□□□ 0.47
LRRTM1-201ENST00000295057 EVI5LQ96CN4 794 aa17.98■□□□□ 0.47
LRRTM1-201ENST00000295057 CRKLP46109 303 aaKnown RBP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 ZNF75DP51815 510 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 SYCP1Q15431 976 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 CCDC144BQ3MJ40 725 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 CCDC144CPQ8IYA2 1237 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 KIF18AQ8NI77 898 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 PDRG1Q9NUG6 133 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 V9GYY5 206 aaPredicted RBP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 LRP6O75581 1613 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 NMIQ13287 307 aaPredicted RBP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 COL9A3Q14050 684 aaPredicted RBP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 ME3Q16798 604 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 TPD52L1Q16890 204 aaPredicted RBP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 CDC37L1Q7L3B6 337 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 PLA2G4DQ86XP0 818 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 ZBTB38Q8NAP3 1195 aaPredicted RBP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 DNAJC2Q99543 621 aaKnown RBP17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 FSD1Q9BTV5 496 aa17.97■□□□□ 0.47
LRRTM1-201ENST00000295057 TRIM28Q13263 835 aaKnown RBP17.96■□□□□ 0.47
LRRTM1-201ENST00000295057 UBN2Q6ZU65 1347 aa17.96■□□□□ 0.47
LRRTM1-201ENST00000295057 A0A0D9SFI3 127 aa17.96■□□□□ 0.47
LRRTM1-201ENST00000295057 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
LRRTM1-201ENST00000295057 HSPA1LP34931 641 aa17.96■□□□□ 0.47
LRRTM1-201ENST00000295057 TNMDQ9H2S6 317 aa17.96■□□□□ 0.47
LRRTM1-201ENST00000295057 MORC2Q9Y6X9 1032 aaPredicted RBP17.96■□□□□ 0.47
LRRTM1-201ENST00000295057 NWD2Q9ULI1 1742 aa17.96■□□□□ 0.47
LRRTM1-201ENST00000295057 EYA2O00167 538 aa17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 IL6STP40189 918 aaPredicted RBP17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 IRX5P78411 483 aaPredicted RBP17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 SLFNL1Q499Z3 407 aa17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 PRPF40BQ6NWY9 871 aaKnown RBP17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 TRMT112Q9UI30 125 aaKnown RBP17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 USP27XA6NNY8 438 aa17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 ARID5BQ14865 1188 aa17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 CCDC57Q2TAC2 916 aa17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 TAF7LQ5H9L4 462 aa17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 PALLDQ8WX93 1383 aa17.95■□□□□ 0.46
LRRTM1-201ENST00000295057 KCNJ4P48050 445 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 KRT85P78386 507 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 LARP1BQ659C4 914 aaKnown RBP17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 GREM2Q9H772 168 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 TFIP11Q9UBB9 837 aaKnown RBP17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 PAXBP1Q9Y5B6 917 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 VPS72Q15906 364 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 KMT5BQ4FZB7 885 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 KLHL34Q8N239 644 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 DNAJC25Q9H1X3 360 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 CLIP2Q9UDT6 1046 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 USP21Q9UK80 565 aa17.94■□□□□ 0.46
LRRTM1-201ENST00000295057 TERF2Q15554 542 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms