RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ADCY5O95622 1261 aa18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 ATP2B3Q16720 1220 aa18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 SHANK3Q9BYB0 1731 aa18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 TOGARAM1Q9Y4F4 1720 aa18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 LETM1O95202 739 aaPredicted RBP18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 GIGYF2Q6Y7W6 1299 aaKnown RBP18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 NLRP10Q86W26 655 aa18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 LEO1Q8WVC0 666 aaPredicted RBP18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 ZKSCAN5Q9Y2L8 839 aa18.65■□□□□ 0.58
NCKIPSD-201ENST00000294129 PTPDC1A2A3K4 754 aa18.64■□□□□ 0.57
NCKIPSD-201ENST00000294129 PUS7LQ9H0K6 701 aaKnown RBP18.64■□□□□ 0.57
NCKIPSD-201ENST00000294129 NUP62CLQ9H1M0 184 aa18.64■□□□□ 0.57
NCKIPSD-201ENST00000294129 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
NCKIPSD-201ENST00000294129 IRS4O14654 1257 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-201ENST00000294129 TEX13AQ9BXU3 409 aaPredicted RBP18.64■□□□□ 0.57
NCKIPSD-201ENST00000294129 KDM4FA0A1W2PPD8 638 aa18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 HMGB1P09429 215 aaKnown RBP18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 NSUN7Q8NE18 718 aaKnown RBP18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 TTLL11Q8NHH1 800 aa18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 SCAND2PQ9GZW5 306 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 SNAP23O00161 211 aa18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 ADAMTS2O95450 1211 aa18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 ACSBG1Q96GR2 724 aa18.63■□□□□ 0.57
NCKIPSD-201ENST00000294129 EXOC5O00471 708 aa18.62■□□□□ 0.57
NCKIPSD-201ENST00000294129 CTDNEP1O95476 244 aa18.62■□□□□ 0.57
NCKIPSD-201ENST00000294129 HS1BP3Q53T59 392 aa18.62■□□□□ 0.57
NCKIPSD-201ENST00000294129 TNMDQ9H2S6 317 aa18.62■□□□□ 0.57
NCKIPSD-201ENST00000294129 CYP19A1P11511 503 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-201ENST00000294129 LAMA4Q16363 1823 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 ABCA3Q99758 1704 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 ANKRD18BA2A2Z9 1011 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 PFKFB2O60825 505 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 KDM4AO75164 1064 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 FGAP02671 866 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 APPP05067 770 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 MCAMP43121 646 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 RESTQ13127 1097 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 MAP3K11Q16584 847 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 R3HCC1Q9Y3T6 440 aaKnown RBP18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 NR1I2O75469 434 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 CCDC192P0DO97 292 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 CTSWP56202 376 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 PGBD1Q96JS3 809 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 TTC12Q9H892 705 aaPredicted RBP18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 PAPPAQ13219 1627 aa18.61■□□□□ 0.57
NCKIPSD-201ENST00000294129 EXOSC10Q01780 885 aaKnown RBP18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 TRIM28Q13263 835 aaKnown RBP18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 OTUD7BQ6GQQ9 843 aa18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 SPC24Q8NBT2 197 aa18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 GPAA1O43292 621 aa18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 CSF1RP07333 972 aa18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 IMMTQ16891 758 aaKnown RBP18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 FUCA2Q9BTY2 467 aa18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 PDIA3P30101 505 aaKnown RBP18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 VSIG10Q8N0Z9 540 aa18.6■□□□□ 0.57
NCKIPSD-201ENST00000294129 FOXP2O15409 715 aa18.59■□□□□ 0.57
NCKIPSD-201ENST00000294129 RRP9O43818 475 aaKnown RBP18.59■□□□□ 0.57
NCKIPSD-201ENST00000294129 SLC9C2Q5TAH2 1124 aa18.59■□□□□ 0.57
NCKIPSD-201ENST00000294129 DENND2AQ9ULE3 1009 aa18.59■□□□□ 0.57
NCKIPSD-201ENST00000294129 RIPOR2Q9Y4F9 1068 aa18.59■□□□□ 0.57
NCKIPSD-201ENST00000294129 C17orf53Q8N3J3 647 aaPredicted RBP18.59■□□□□ 0.57
NCKIPSD-201ENST00000294129 AP5Z1O43299 807 aa18.58■□□□□ 0.57
NCKIPSD-201ENST00000294129 UVSSAQ2YD98 709 aa18.58■□□□□ 0.57
NCKIPSD-201ENST00000294129 LRRFIP1Q32MZ4 808 aaKnown RBP18.58■□□□□ 0.57
NCKIPSD-201ENST00000294129 LUZP1Q86V48 1076 aa18.58■□□□□ 0.57
NCKIPSD-201ENST00000294129 ELP1O95163 1332 aa18.58■□□□□ 0.56
NCKIPSD-201ENST00000294129 PHKA1P46020 1223 aa18.58■□□□□ 0.56
NCKIPSD-201ENST00000294129 TYRO3Q06418 890 aa18.58■□□□□ 0.56
NCKIPSD-201ENST00000294129 APPBP2Q92624 585 aa18.58■□□□□ 0.56
NCKIPSD-201ENST00000294129 PRC1O43663 620 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 OFD1O75665 1012 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 RALYLQ86SE5 291 aaKnown RBP18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 SMARCC2Q8TAQ2 1214 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 GJB4Q9NTQ9 266 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 RIC1Q4ADV7 1423 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 UBN2Q6ZU65 1347 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 ITGB4P16144 1822 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 KLF18A0A0U1RQI7 1052 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 GOLGA8BA8MQT2 603 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 GLIPR1L2Q4G1C9 344 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 CTNNA3Q9UI47 895 aa18.57■□□□□ 0.56
NCKIPSD-201ENST00000294129 ZNF213O14771 459 aa18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 RXRAP19793 462 aa18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 ANO6Q4KMQ2 910 aa18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 FBXW7Q969H0 707 aa18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 PLA2G12BQ9BX93 195 aa18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 PIH1D3Q9NQM4 214 aaKnown RBP18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 ZFYP08048 801 aaPredicted RBP18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 STK11IPQ8N1F8 1099 aa18.56■□□□□ 0.56
NCKIPSD-201ENST00000294129 A0A087WWV3 80 aa18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 HMGN5P82970 282 aaKnown RBP18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 DNTTIP2Q5QJE6 756 aaKnown RBP18.55■□□□□ 0.56
NCKIPSD-201ENST00000294129 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms