RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 CYP19A1P11511 503 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-201ENST00000291842 TTLL11Q8NHH1 800 aa21.68■■□□□ 1.06
SHKBP1-201ENST00000291842 FUCA2Q9BTY2 467 aa21.68■■□□□ 1.06
SHKBP1-201ENST00000291842 PLA2G12BQ9BX93 195 aa21.68■■□□□ 1.06
SHKBP1-201ENST00000291842 CCDC39Q9UFE4 941 aa21.68■■□□□ 1.06
SHKBP1-201ENST00000291842 PFKFB2O60825 505 aa21.68■■□□□ 1.06
SHKBP1-201ENST00000291842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.68■■□□□ 1.06
SHKBP1-201ENST00000291842 LEO1Q8WVC0 666 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-201ENST00000291842 GOLGA6L4A6NEF3 574 aa21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 CTDNEP1O95476 244 aa21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 PLCB2Q00722 1185 aa21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 ATP2B3Q16720 1220 aa21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 NSUN7Q8NE18 718 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 GPHNQ9NQX3 736 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 ZKSCAN5Q9Y2L8 839 aa21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 ITGB4P16144 1822 aa21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 FOXP2O15409 715 aa21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 CEBPZQ03701 1054 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 SCAND2PQ9GZW5 306 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 PUS7LQ9H0K6 701 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 TRMT112Q9UI30 125 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-201ENST00000291842 RESTQ13127 1097 aa21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 RIPOR2Q9Y4F9 1068 aa21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 ELP1O95163 1332 aa21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 NHSL1Q5SYE7 1610 aa21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 IRS4O14654 1257 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 UVSSAQ2YD98 709 aa21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 CNNM1Q9NRU3 951 aa21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 DACT1Q9NYF0 836 aa21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 FBXO3Q9UK99 471 aa21.66■■□□□ 1.06
SHKBP1-201ENST00000291842 PTPDC1A2A3K4 754 aa21.65■■□□□ 1.06
SHKBP1-201ENST00000291842 SMARCC2Q8TAQ2 1214 aa21.65■■□□□ 1.06
SHKBP1-201ENST00000291842 BCL9O00512 1426 aa21.65■■□□□ 1.06
SHKBP1-201ENST00000291842 EXOC5O00471 708 aa21.65■■□□□ 1.06
SHKBP1-201ENST00000291842 ADCY5O95622 1261 aa21.65■■□□□ 1.06
SHKBP1-201ENST00000291842 CTSWP56202 376 aa21.65■■□□□ 1.06
SHKBP1-201ENST00000291842 CKAP2LQ8IYA6 745 aa21.65■■□□□ 1.06
SHKBP1-201ENST00000291842 RIC1Q4ADV7 1423 aa21.64■■□□□ 1.06
SHKBP1-201ENST00000291842 MCAMP43121 646 aa21.64■■□□□ 1.05
SHKBP1-201ENST00000291842 NUP62CLQ9H1M0 184 aa21.64■■□□□ 1.05
SHKBP1-201ENST00000291842 ANKRD18BA2A2Z9 1011 aa21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 FGAP02671 866 aa21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 GUCY1B3Q02153 619 aa21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 PGBD1Q96JS3 809 aa21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 FAM177BA6PVY3 158 aa21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 PDIA3P30101 505 aaKnown RBP21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 ZNF830Q96NB3 372 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 CDHR2Q9BYE9 1310 aa21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 AGXT2Q9BYV1 514 aa21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 FTOQ9C0B1 505 aaKnown RBP eCLIP21.63■■□□□ 1.05
SHKBP1-201ENST00000291842 DZIP3Q86Y13 1208 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-201ENST00000291842 LLPHQ9BRT6 129 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-201ENST00000291842 LRRFIP1Q32MZ4 808 aaKnown RBP21.62■■□□□ 1.05
SHKBP1-201ENST00000291842 HELBQ8NG08 1087 aaPredicted RBP21.62■■□□□ 1.05
SHKBP1-201ENST00000291842 BICD2Q8TD16 824 aa21.62■■□□□ 1.05
SHKBP1-201ENST00000291842 ZFYP08048 801 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 CCDC192P0DO97 292 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 MAP3K11Q16584 847 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 TICAM2Q86XR7 235 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 RAB11FIP4Q86YS3 637 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 APPBP2Q92624 585 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 SPEF2Q9C093 1822 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 DISP2A7MBM2 1401 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 UBN2Q6ZU65 1347 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 ZNF500O60304 480 aaPredicted RBP21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 KDM4AO75164 1064 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 NR1I2O75469 434 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 IMMTQ16891 758 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 TNMDQ9H2S6 317 aa21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.61■■□□□ 1.05
SHKBP1-201ENST00000291842 GPAA1O43292 621 aa21.6■■□□□ 1.05
SHKBP1-201ENST00000291842 AP5Z1O43299 807 aa21.6■■□□□ 1.05
SHKBP1-201ENST00000291842 OFD1O75665 1012 aa21.6■■□□□ 1.05
SHKBP1-201ENST00000291842 ZSCAN16Q9H4T2 348 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-201ENST00000291842 CTNNA3Q9UI47 895 aa21.6■■□□□ 1.05
SHKBP1-201ENST00000291842 SLC9C2Q5TAH2 1124 aa21.59■■□□□ 1.05
SHKBP1-201ENST00000291842 VGLL2Q8N8G2 317 aa21.59■■□□□ 1.05
SHKBP1-201ENST00000291842 NWD2Q9ULI1 1742 aa21.59■■□□□ 1.05
SHKBP1-201ENST00000291842 SNAP23O00161 211 aa21.58■■□□□ 1.05
SHKBP1-201ENST00000291842 IDH1O75874 414 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-201ENST00000291842 PHKA1P46020 1223 aa21.58■■□□□ 1.05
SHKBP1-201ENST00000291842 HMGN5P82970 282 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-201ENST00000291842 ZNF274Q96GC6 653 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-201ENST00000291842 ACSBG1Q96GR2 724 aa21.58■■□□□ 1.05
SHKBP1-201ENST00000291842 PIH1D3Q9NQM4 214 aaKnown RBP21.58■■□□□ 1.05
SHKBP1-201ENST00000291842 LRP6O75581 1613 aa21.58■■□□□ 1.04
SHKBP1-201ENST00000291842 PRC1O43663 620 aa21.58■■□□□ 1.04
SHKBP1-201ENST00000291842 PDE8AO60658 829 aa21.58■■□□□ 1.04
SHKBP1-201ENST00000291842 PDE8BO95263 885 aa21.58■■□□□ 1.04
SHKBP1-201ENST00000291842 ADD1P35611 737 aaKnown RBP21.58■■□□□ 1.04
SHKBP1-201ENST00000291842 TYRO3Q06418 890 aa21.58■■□□□ 1.04
SHKBP1-201ENST00000291842 DENND2AQ9ULE3 1009 aa21.58■■□□□ 1.04
SHKBP1-201ENST00000291842 MRVI1Q9Y6F6 885 aa21.58■■□□□ 1.04
SHKBP1-201ENST00000291842 CFAP45Q9UL16 551 aa21.57■■□□□ 1.04
SHKBP1-201ENST00000291842 ADAMTS2O95450 1211 aa21.56■■□□□ 1.04
SHKBP1-201ENST00000291842 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
SHKBP1-201ENST00000291842 SALL1Q9NSC2 1324 aa21.56■■□□□ 1.04
SHKBP1-201ENST00000291842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.56■■□□□ 1.04
SHKBP1-201ENST00000291842 ZNF213O14771 459 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms