RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ST3GAL1Q11201 340 aa21.38■■□□□ 1.01
CAPN1-201ENST00000279247 NSFL1CQ9UNZ2 370 aaKnown RBP21.38■■□□□ 1.01
CAPN1-201ENST00000279247 STOX1Q6ZVD7 989 aa21.37■■□□□ 1.01
CAPN1-201ENST00000279247 GAS2L3Q86XJ1 694 aa21.37■■□□□ 1.01
CAPN1-201ENST00000279247 SRP68Q9UHB9 627 aaKnown RBP21.37■■□□□ 1.01
CAPN1-201ENST00000279247 RPAP1Q9BWH6 1393 aaPredicted RBP21.37■■□□□ 1.01
CAPN1-201ENST00000279247 TRIM37O94972 964 aa21.37■■□□□ 1.01
CAPN1-201ENST00000279247 PUS7LQ9H0K6 701 aaKnown RBP21.37■■□□□ 1.01
CAPN1-201ENST00000279247 HMG20BQ9P0W2 317 aa21.37■■□□□ 1.01
CAPN1-201ENST00000279247 TOB2Q14106 344 aaPredicted RBP21.37■■□□□ 1.01
CAPN1-201ENST00000279247 CLEC17AQ6ZS10 378 aa21.37■■□□□ 1.01
CAPN1-201ENST00000279247 Q6ZUG5 572 aa21.37■■□□□ 1.01
CAPN1-201ENST00000279247 WDR33Q9C0J8 1336 aaKnown RBP21.36■■□□□ 1.01
CAPN1-201ENST00000279247 STX6O43752 255 aa21.36■■□□□ 1.01
CAPN1-201ENST00000279247 CCDC102BQ68D86 513 aa21.36■■□□□ 1.01
CAPN1-201ENST00000279247 FERMT3Q86UX7 667 aa21.36■■□□□ 1.01
CAPN1-201ENST00000279247 HELLSQ9NRZ9 838 aa21.36■■□□□ 1.01
CAPN1-201ENST00000279247 PHF14O94880 888 aa21.36■■□□□ 1.01
CAPN1-201ENST00000279247 XRCC6P12956 609 aaKnown RBP eCLIP21.36■■□□□ 1.01
CAPN1-201ENST00000279247 FOSBP53539 338 aa21.36■■□□□ 1.01
CAPN1-201ENST00000279247 BRF1Q92994 677 aa21.36■■□□□ 1.01
CAPN1-201ENST00000279247 GPT2Q8TD30 523 aa21.35■■□□□ 1.01
CAPN1-201ENST00000279247 FBXO3Q9UK99 471 aa21.35■■□□□ 1.01
CAPN1-201ENST00000279247 GNPATO15228 680 aa21.35■■□□□ 1.01
CAPN1-201ENST00000279247 KLHL40Q2TBA0 621 aa21.35■■□□□ 1.01
CAPN1-201ENST00000279247 SLC9C2Q5TAH2 1124 aa21.35■■□□□ 1.01
CAPN1-201ENST00000279247 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
CAPN1-201ENST00000279247 ATRNO75882 1429 aa21.35■■□□□ 1.01
CAPN1-201ENST00000279247 WTIPA6NIX2 430 aaPredicted RBP21.34■■□□□ 1.01
CAPN1-201ENST00000279247 ERFEQ4G0M1 354 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 USPL1Q5W0Q7 1092 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 C3orf67Q6ZVT6 689 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 VGLL2Q8N8G2 317 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 ZSCAN31Q96LW9 406 aaPredicted RBP21.34■■□□□ 1.01
CAPN1-201ENST00000279247 NTSR2O95665 410 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 SH2B1Q9NRF2 756 aaPredicted RBP21.34■■□□□ 1.01
CAPN1-201ENST00000279247 TAOK2Q9UL54 1235 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 TCHHQ07283 1943 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 APPP05067 770 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 PTMSP20962 102 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 CCDC152Q4G0S7 254 aa21.34■■□□□ 1.01
CAPN1-201ENST00000279247 L1TD1Q5T7N2 865 aaKnown RBP21.34■■□□□ 1.01
CAPN1-201ENST00000279247 NPHP1O15259 732 aa21.33■■□□□ 1.01
CAPN1-201ENST00000279247 DDX11Q96FC9 970 aa21.33■■□□□ 1.01
CAPN1-201ENST00000279247 PIH1D3Q9NQM4 214 aaKnown RBP21.33■■□□□ 1.01
CAPN1-201ENST00000279247 CNPY2Q9Y2B0 182 aa21.33■■□□□ 1.01
CAPN1-201ENST00000279247 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1.01
CAPN1-201ENST00000279247 IGHMBP2P38935 993 aaKnown RBP21.33■■□□□ 1
CAPN1-201ENST00000279247 KRT32Q14532 448 aa21.33■■□□□ 1
CAPN1-201ENST00000279247 MYH3P11055 1940 aa21.33■■□□□ 1
CAPN1-201ENST00000279247 FIBPO43427 364 aa21.32■■□□□ 1
CAPN1-201ENST00000279247 PUM3Q15397 648 aaKnown RBP21.32■■□□□ 1
CAPN1-201ENST00000279247 PARP10Q53GL7 1025 aa21.32■■□□□ 1
CAPN1-201ENST00000279247 GADD45BO75293 160 aaPredicted RBP21.31■■□□□ 1
CAPN1-201ENST00000279247 ZSCAN22P10073 491 aaPredicted RBP21.31■■□□□ 1
CAPN1-201ENST00000279247 BCAMP50895 628 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 FAM173BQ6P4H8 233 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 ONECUT3O60422 494 aaPredicted RBP21.31■■□□□ 1
CAPN1-201ENST00000279247 JAK2O60674 1132 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 LARP1BQ659C4 914 aaKnown RBP21.31■■□□□ 1
CAPN1-201ENST00000279247 TBC1D9BQ66K14 1250 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 KRT27Q7Z3Y8 459 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 GPAA1O43292 621 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 CCT2P78371 535 aaKnown RBP21.31■■□□□ 1
CAPN1-201ENST00000279247 RAB11FIP4Q86YS3 637 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 LRRC4BQ9NT99 713 aa21.31■■□□□ 1
CAPN1-201ENST00000279247 APOBRQ0VD83 1088 aa21.3■■□□□ 1
CAPN1-201ENST00000279247 WWC3Q9ULE0 1092 aa21.3■■□□□ 1
CAPN1-201ENST00000279247 RFX7Q2KHR2 1363 aa21.3■■□□□ 1
CAPN1-201ENST00000279247 E7EWF7 191 aa21.3■■□□□ 1
CAPN1-201ENST00000279247 ANKRD1Q15327 319 aa21.3■■□□□ 1
CAPN1-201ENST00000279247 LPIN2Q92539 896 aa21.3■■□□□ 1
CAPN1-201ENST00000279247 DSCC1Q9BVC3 393 aa21.3■■□□□ 1
CAPN1-201ENST00000279247 GRPEL1Q9HAV7 217 aa21.3■■□□□ 1
CAPN1-201ENST00000279247 GPHNQ9NQX3 736 aaPredicted RBP21.3■■□□□ 1
CAPN1-201ENST00000279247 FSD2A1L4K1 749 aa21.29■■□□□ 1
CAPN1-201ENST00000279247 SLC5A1P13866 664 aa21.29■■□□□ 1
CAPN1-201ENST00000279247 USP48Q86UV5 1035 aa21.29■■□□□ 1
CAPN1-201ENST00000279247 STK11IPQ8N1F8 1099 aa21.29■■□□□ 1
CAPN1-201ENST00000279247 APPBP2Q92624 585 aa21.29■■□□□ 1
CAPN1-201ENST00000279247 FGAP02671 866 aa21.29■■□□□ 1
CAPN1-201ENST00000279247 LRRFIP1Q32MZ4 808 aaKnown RBP21.29■■□□□ 1
CAPN1-201ENST00000279247 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.29■■□□□ 1
CAPN1-201ENST00000279247 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.29■■□□□ 17e-7■■■■□ 19.9
CAPN1-201ENST00000279247 MROH5Q6ZUA9 1318 aa21.29■■□□□ 1
CAPN1-201ENST00000279247 F13A1P00488 732 aa21.28■■□□□ 1
CAPN1-201ENST00000279247 CHRNDQ07001 517 aa21.28■■□□□ 1
CAPN1-201ENST00000279247 TSGA10IPQ3SY00 556 aa21.28■■□□□ 1
CAPN1-201ENST00000279247 ZNF532Q9HCE3 1301 aa21.28■■□□□ 1
CAPN1-201ENST00000279247 RASGRF1Q13972 1273 aa21.28■■□□□ 1
CAPN1-201ENST00000279247 ZSCAN23Q3MJ62 389 aa21.28■■□□□ 1
CAPN1-201ENST00000279247 NCOA5Q9HCD5 579 aaKnown RBP21.28■■□□□ 1
CAPN1-201ENST00000279247 ZPR1O75312 459 aa21.27■■□□□ 1
CAPN1-201ENST00000279247 DNM1Q05193 864 aaKnown RBP21.27■■□□□ 1
CAPN1-201ENST00000279247 CDC37L1Q7L3B6 337 aa21.27■■□□□ 1
CAPN1-201ENST00000279247 TMEM63CQ9P1W3 806 aa21.27■■□□□ 1
CAPN1-201ENST00000279247 MTMR6Q9Y217 621 aa21.27■■□□□ 1
CAPN1-201ENST00000279247 THSD7AQ9UPZ6 1657 aa21.27■■□□□ 1
CAPN1-201ENST00000279247 FOXP2O15409 715 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms