RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
MRPS28-201ENST00000276585 SPRYD7Q5W111 196 aa15.93■□□□□ 0.14
MRPS28-201ENST00000276585 COPS6Q7L5N1 327 aa15.93■□□□□ 0.14
MRPS28-201ENST00000276585 ARMC9Q7Z3E5 817 aa15.93■□□□□ 0.14
MRPS28-201ENST00000276585 IFNL1Q8IU54 200 aa15.93■□□□□ 0.14
MRPS28-201ENST00000276585 MANSC4A6NHS7 340 aaPredicted RBP15.92■□□□□ 0.14
MRPS28-201ENST00000276585 GNAI1P63096 354 aa15.92■□□□□ 0.14
MRPS28-201ENST00000276585 CACNB1Q02641 598 aaPredicted RBP15.92■□□□□ 0.14
MRPS28-201ENST00000276585 CCDC27Q2M243 656 aa15.92■□□□□ 0.14
MRPS28-201ENST00000276585 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
MRPS28-201ENST00000276585 MYOZ2Q9NPC6 264 aa15.92■□□□□ 0.14
MRPS28-201ENST00000276585 POLLQ9UGP5 575 aa15.92■□□□□ 0.14
MRPS28-201ENST00000276585 INHBEP58166 350 aa15.91■□□□□ 0.14
MRPS28-201ENST00000276585 C8orf58Q8NAV2 365 aa15.91■□□□□ 0.14
MRPS28-201ENST00000276585 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
MRPS28-201ENST00000276585 CALD1Q05682 793 aaKnown RBP15.9■□□□□ 0.14
MRPS28-201ENST00000276585 AIMP1Q12904 312 aaKnown RBP15.9■□□□□ 0.14
MRPS28-201ENST00000276585 RSBN1LQ6PCB5 846 aaPredicted RBP15.9■□□□□ 0.14
MRPS28-201ENST00000276585 WWC1Q8IX03 1113 aa15.9■□□□□ 0.14
MRPS28-201ENST00000276585 AGBL3Q8NEM8 1001 aa15.9■□□□□ 0.14
MRPS28-201ENST00000276585 COL25A1Q9BXS0 654 aaPredicted RBP15.9■□□□□ 0.14
MRPS28-201ENST00000276585 COL4A1P02462 1669 aa15.89■□□□□ 0.13
MRPS28-201ENST00000276585 IGF2BP3O00425 579 aaKnown RBP eCLIP15.89■□□□□ 0.13
MRPS28-201ENST00000276585 USP17L8P0C7I0 530 aa15.89■□□□□ 0.13
MRPS28-201ENST00000276585 GPSM2P81274 684 aa15.89■□□□□ 0.13
MRPS28-201ENST00000276585 SP3Q02447 781 aa15.89■□□□□ 0.13
MRPS28-201ENST00000276585 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
MRPS28-201ENST00000276585 TSR2Q969E8 191 aaKnown RBP15.89■□□□□ 0.13
MRPS28-201ENST00000276585 LRCH3Q96II8 777 aa15.89■□□□□ 0.13
MRPS28-201ENST00000276585 ZC3H12CQ9C0D7 883 aaKnown RBP15.89■□□□□ 0.13
MRPS28-201ENST00000276585 DBF4Q9UBU7 674 aaPredicted RBP15.89■□□□□ 0.13
MRPS28-201ENST00000276585 PTCH2Q9Y6C5 1203 aa15.89■□□□□ 0.13
MRPS28-201ENST00000276585 LRRC37AA6NMS7 1700 aa15.88■□□□□ 0.13
MRPS28-201ENST00000276585 WTIPA6NIX2 430 aaPredicted RBP15.88■□□□□ 0.13
MRPS28-201ENST00000276585 SOX1O00570 391 aaPredicted RBP15.88■□□□□ 0.13
MRPS28-201ENST00000276585 CRHR2Q13324 411 aa15.88■□□□□ 0.13
MRPS28-201ENST00000276585 NLRP10Q86W26 655 aa15.88■□□□□ 0.13
MRPS28-201ENST00000276585 TSPYL6Q8N831 410 aa15.88■□□□□ 0.13
MRPS28-201ENST00000276585 ANGEL1Q9UNK9 670 aaKnown RBP15.88■□□□□ 0.13
MRPS28-201ENST00000276585 ELL2O00472 640 aaPredicted RBP15.87■□□□□ 0.13
MRPS28-201ENST00000276585 NBPF9Q3BBW0 867 aa15.87■□□□□ 0.13
MRPS28-201ENST00000276585 OTUD7BQ6GQQ9 843 aa15.87■□□□□ 0.13
MRPS28-201ENST00000276585 SLC10A4Q96EP9 437 aa15.87■□□□□ 0.13
MRPS28-201ENST00000276585 PRO3102Q9H379 93 aa15.87■□□□□ 0.13
MRPS28-201ENST00000276585 TRMT112Q9UI30 125 aaKnown RBP15.87■□□□□ 0.13
MRPS28-201ENST00000276585 SCN9AQ15858 1988 aa15.86■□□□□ 0.13
MRPS28-201ENST00000276585 ARHGEF6Q15052 776 aa15.86■□□□□ 0.13
MRPS28-201ENST00000276585 PLBD2Q8NHP8 589 aa15.86■□□□□ 0.13
MRPS28-201ENST00000276585 TBC1D16Q8TBP0 767 aa15.86■□□□□ 0.13
MRPS28-201ENST00000276585 CELF1Q92879 486 aaKnown RBP15.86■□□□□ 0.13
MRPS28-201ENST00000276585 ISCA1Q9BUE6 129 aa15.86■□□□□ 0.13
MRPS28-201ENST00000276585 IL16Q14005 1332 aa15.86■□□□□ 0.13
MRPS28-201ENST00000276585 LAMA3Q16787 3333 aa15.85■□□□□ 0.13
MRPS28-201ENST00000276585 CAP1Q01518 475 aa15.85■□□□□ 0.13
MRPS28-201ENST00000276585 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
MRPS28-201ENST00000276585 LDLRAD1Q5T700 205 aa15.85■□□□□ 0.13
MRPS28-201ENST00000276585 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
MRPS28-201ENST00000276585 HYPKQ9NX55 129 aa15.85■□□□□ 0.13
MRPS28-201ENST00000276585 NR2E3Q9Y5X4 410 aa15.85■□□□□ 0.13
MRPS28-201ENST00000276585 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
MRPS28-201ENST00000276585 UNC80Q8N2C7 3258 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 A0A1W2PPC1 479 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 ZBTB48P10074 688 aaPredicted RBP15.84■□□□□ 0.13
MRPS28-201ENST00000276585 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 SH3TC2Q8TF17 1288 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 ZNF428Q96B54 188 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 WNK4Q96J92 1243 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 HTATIP2Q9BUP3 242 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 MYH3P11055 1940 aa15.84■□□□□ 0.13
MRPS28-201ENST00000276585 UFL1O94874 794 aa15.83■□□□□ 0.12
MRPS28-201ENST00000276585 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
MRPS28-201ENST00000276585 FANCIQ9NVI1 1328 aa15.83■□□□□ 0.12
MRPS28-201ENST00000276585 DEFB123Q8N688 67 aa15.82■□□□□ 0.12
MRPS28-201ENST00000276585 GMLQ99445 158 aa15.82■□□□□ 0.12
MRPS28-201ENST00000276585 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
MRPS28-201ENST00000276585 ATP5J2-PTCD1G3V325 749 aa15.81■□□□□ 0.12
MRPS28-201ENST00000276585 OGFOD1Q8N543 542 aa15.81■□□□□ 0.12
MRPS28-201ENST00000276585 ANKIB1Q9P2G1 1089 aa15.81■□□□□ 0.12
MRPS28-201ENST00000276585 STXBP5LQ9Y2K9 1186 aa15.81■□□□□ 0.12
MRPS28-201ENST00000276585 ZNF521Q96K83 1311 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 USP17L3A6NCW0 530 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 USP17L4A6NCW7 530 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 WNT10BO00744 389 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 ZBTB7BO15156 539 aaPredicted RBP15.8■□□□□ 0.12
MRPS28-201ENST00000276585 TRIM28Q13263 835 aaKnown RBP15.8■□□□□ 0.12
MRPS28-201ENST00000276585 USP17L1Q7RTZ2 530 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 APOBEC3FQ8IUX4 373 aaKnown RBP15.8■□□□□ 0.12
MRPS28-201ENST00000276585 WDR63Q8IWG1 891 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 SHISA4Q96DD7 197 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 GGA1Q9UJY5 639 aa15.8■□□□□ 0.12
MRPS28-201ENST00000276585 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
MRPS28-201ENST00000276585 SASH1O94885 1247 aa15.79■□□□□ 0.12
MRPS28-201ENST00000276585 TWISTNBQ3B726 338 aaPredicted RBP15.79■□□□□ 0.12
MRPS28-201ENST00000276585 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
MRPS28-201ENST00000276585 SPEF2Q9C093 1822 aa15.78■□□□□ 0.12
MRPS28-201ENST00000276585 GOLGA2Q08379 1002 aa15.78■□□□□ 0.12
MRPS28-201ENST00000276585 Q7L0L9 218 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms