RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ARID4AP29374 1257 aaPredicted RBP11.45□□□□□ -0.58
TRIM55-201ENST00000276573 IGHMBP2P38935 993 aaKnown RBP11.45□□□□□ -0.58
TRIM55-201ENST00000276573 ANKRD1Q15327 319 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 TBC1D9BQ66K14 1250 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 CCDC102BQ68D86 513 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 PI16Q6UXB8 463 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 SEPT12Q8IYM1 358 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 NEK1Q96PY6 1258 aa11.45□□□□□ -0.58
TRIM55-201ENST00000276573 ATRNO75882 1429 aa11.44□□□□□ -0.58
TRIM55-201ENST00000276573 BCORQ6W2J9 1755 aa11.44□□□□□ -0.58
TRIM55-201ENST00000276573 NHSQ6T4R5 1651 aa11.44□□□□□ -0.58
TRIM55-201ENST00000276573 SLC5A1P13866 664 aa11.44□□□□□ -0.58
TRIM55-201ENST00000276573 PHKA1P46020 1223 aa11.44□□□□□ -0.58
TRIM55-201ENST00000276573 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
TRIM55-201ENST00000276573 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
TRIM55-201ENST00000276573 ME3Q16798 604 aa11.44□□□□□ -0.58
TRIM55-201ENST00000276573 MCTP1Q6DN14 999 aa11.44□□□□□ -0.58
TRIM55-201ENST00000276573 LRP5O75197 1615 aa11.44□□□□□ -0.58
TRIM55-201ENST00000276573 GNPATO15228 680 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 BICDL1Q6ZP65 573 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 APPBP2Q92624 585 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 SRP68Q9UHB9 627 aaKnown RBP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 TPCN1Q9ULQ1 816 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 SMC3Q9UQE7 1217 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 RTCBQ9Y3I0 505 aaKnown RBP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 SNAP23O00161 211 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 ZPR1O75312 459 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 TOB2Q14106 344 aaPredicted RBP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 WASHC4Q2M389 1173 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 FOXD4L5Q5VV16 416 aaPredicted RBP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 ZSCAN25Q6NSZ9 544 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 FOXD4L4Q8WXT5 416 aaPredicted RBP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 SETDB2Q96T68 719 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 CDC5LQ99459 802 aaKnown RBP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM55-201ENST00000276573 LMBRD1Q9NUN5 540 aa11.43□□□□□ -0.58
TRIM55-201ENST00000276573 GTF2E1P29083 439 aaPredicted RBP11.42□□□□□ -0.58
TRIM55-201ENST00000276573 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
TRIM55-201ENST00000276573 TCEANC2Q96MN5 208 aa11.42□□□□□ -0.58
TRIM55-201ENST00000276573 BCL11BQ9C0K0 894 aaPredicted RBP11.42□□□□□ -0.58
TRIM55-201ENST00000276573 NYXQ9GZU5 481 aa11.42□□□□□ -0.58
TRIM55-201ENST00000276573 PUS7LQ9H0K6 701 aaKnown RBP11.42□□□□□ -0.58
TRIM55-201ENST00000276573 GZF1Q9H116 711 aaPredicted RBP11.42□□□□□ -0.58
TRIM55-201ENST00000276573 WDR33Q9C0J8 1336 aaKnown RBP11.42□□□□□ -0.58
TRIM55-201ENST00000276573 AKAP11Q9UKA4 1901 aa11.42□□□□□ -0.58
TRIM55-201ENST00000276573 ADD2P35612 726 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 CHRNDQ07001 517 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 ST3GAL1Q11201 340 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 STOX1Q6ZVD7 989 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 NECAB1Q8N987 351 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 PIH1D3Q9NQM4 214 aaKnown RBP11.41□□□□□ -0.58
TRIM55-201ENST00000276573 CTNNA3Q9UI47 895 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 LAMB2P55268 1798 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 HMGB1P09429 215 aaKnown RBP11.41□□□□□ -0.58
TRIM55-201ENST00000276573 SLC9C2Q5TAH2 1124 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 AMIGO3Q86WK7 504 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 ANKRD18AQ8IVF6 992 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 SPATA5Q8NB90 893 aa11.41□□□□□ -0.58
TRIM55-201ENST00000276573 A0A0G2JLW4 131 aa11.4□□□□□ -0.58
TRIM55-201ENST00000276573 E7EWF7 191 aa11.4□□□□□ -0.58
TRIM55-201ENST00000276573 FOXP2O15409 715 aa11.4□□□□□ -0.58
TRIM55-201ENST00000276573 SYT1P21579 422 aa11.4□□□□□ -0.58
TRIM55-201ENST00000276573 GJB2P29033 226 aa11.4□□□□□ -0.58
TRIM55-201ENST00000276573 UBE3CQ15386 1083 aa11.4□□□□□ -0.58
TRIM55-201ENST00000276573 TRAPPC3LQ5T215 181 aa11.4□□□□□ -0.58
TRIM55-201ENST00000276573 Q6ZUG5 572 aa11.4□□□□□ -0.58
TRIM55-201ENST00000276573 DHX32Q7L7V1 743 aaKnown RBP11.4□□□□□ -0.58
TRIM55-201ENST00000276573 BSDC1Q9NW68 430 aaPredicted RBP11.4□□□□□ -0.58
TRIM55-201ENST00000276573 STX6O43752 255 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 PRPF40AO75400 957 aaKnown RBP11.39□□□□□ -0.59
TRIM55-201ENST00000276573 FGAP02671 866 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 BCAMP50895 628 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 EXOSC10Q01780 885 aaKnown RBP11.39□□□□□ -0.59
TRIM55-201ENST00000276573 KLHL40Q2TBA0 621 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 TTLL5Q6EMB2 1281 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 TPTE2Q6XPS3 522 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 NBPF5PQ86XG9 351 aaPredicted RBP11.39□□□□□ -0.59
TRIM55-201ENST00000276573 NLRP3Q96P20 1036 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 DDX49Q9Y6V7 483 aaKnown RBP11.39□□□□□ -0.59
TRIM55-201ENST00000276573 SBF2Q86WG5 1849 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 LY75O60449 1722 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 ARAP2Q8WZ64 1704 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 GPAA1O43292 621 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 IDH1O75874 414 aaKnown RBP11.39□□□□□ -0.59
TRIM55-201ENST00000276573 ZSCAN22P10073 491 aaPredicted RBP11.39□□□□□ -0.59
TRIM55-201ENST00000276573 PDE6AP16499 860 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 RFC4P35249 363 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 RASGRF1Q13972 1273 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 FAM196AQ6ZSG2 479 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 CHAMP1Q96JM3 812 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 LRRC4BQ9NT99 713 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 SCN7AQ01118 1682 aa11.39□□□□□ -0.59
TRIM55-201ENST00000276573 TCRBV5S4A2TA0A5A2 114 aa11.38□□□□□ -0.59
TRIM55-201ENST00000276573 UBE4AQ14139 1066 aa11.38□□□□□ -0.59
TRIM55-201ENST00000276573 IMMTQ16891 758 aaKnown RBP11.38□□□□□ -0.59
TRIM55-201ENST00000276573 MINPP1Q9UNW1 487 aa11.38□□□□□ -0.59
TRIM55-201ENST00000276573 ZNF532Q9HCE3 1301 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms