RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 PYM1Q9BRP8 204 aaKnown RBP13.53□□□□□ -0.24
SHPRH-201ENST00000275233 ESYT1Q9BSJ8 1104 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 ZFYP08048 801 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-201ENST00000275233 EEF2P13639 858 aaKnown RBP13.53□□□□□ -0.24
SHPRH-201ENST00000275233 POLD1P28340 1107 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 KIAA0753Q2KHM9 967 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 FERMT1Q9BQL6 677 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 IKBKGQ9Y6K9 419 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 GNPATO15228 680 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 IL15P40933 162 aaPredicted RBP13.53□□□□□ -0.24
SHPRH-201ENST00000275233 RAB3GAP1Q15042 981 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 TPTE2Q6XPS3 522 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 AOPEPQ8N6M6 819 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 KDM5BQ9UGL1 1544 aa13.53□□□□□ -0.24
SHPRH-201ENST00000275233 WDR7Q9Y4E6 1490 aa13.52□□□□□ -0.24
SHPRH-201ENST00000275233 SMARCC1Q92922 1105 aaPredicted RBP13.52□□□□□ -0.24
SHPRH-201ENST00000275233 HMGXB3Q12766 1538 aa13.52□□□□□ -0.24
SHPRH-201ENST00000275233 DNM1Q05193 864 aaKnown RBP13.52□□□□□ -0.24
SHPRH-201ENST00000275233 JDP2Q8WYK2 163 aa13.52□□□□□ -0.24
SHPRH-201ENST00000275233 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
SHPRH-201ENST00000275233 CCDC175P0C221 793 aa13.52□□□□□ -0.25
SHPRH-201ENST00000275233 EIF6P56537 245 aaKnown RBP13.52□□□□□ -0.25
SHPRH-201ENST00000275233 C6orf50Q9HD87 102 aa13.52□□□□□ -0.25
SHPRH-201ENST00000275233 SSX2IPQ9Y2D8 614 aa13.52□□□□□ -0.25
SHPRH-201ENST00000275233 STX17P56962 302 aa13.52□□□□□ -0.25
SHPRH-201ENST00000275233 GRIPAP1Q4V328 841 aa13.52□□□□□ -0.25
SHPRH-201ENST00000275233 BIN2Q9UBW5 565 aaPredicted RBP13.52□□□□□ -0.25
SHPRH-201ENST00000275233 FAM13AO94988 1023 aa13.52□□□□□ -0.25
SHPRH-201ENST00000275233 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
SHPRH-201ENST00000275233 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.52□□□□□ -0.25
SHPRH-201ENST00000275233 PCDHB15Q9Y5E8 787 aa13.52□□□□□ -0.25
SHPRH-201ENST00000275233 CCDC24Q8N4L8 307 aa13.51□□□□□ -0.25
SHPRH-201ENST00000275233 SRRTQ9BXP5 876 aaKnown RBP13.51□□□□□ -0.25
SHPRH-201ENST00000275233 LDHBP07195 334 aaKnown RBP13.51□□□□□ -0.25
SHPRH-201ENST00000275233 KRT2P35908 639 aa13.51□□□□□ -0.25
SHPRH-201ENST00000275233 TMTC2Q8N394 836 aa13.51□□□□□ -0.25
SHPRH-201ENST00000275233 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
SHPRH-201ENST00000275233 ATP8B2P98198 1209 aa13.51□□□□□ -0.25
SHPRH-201ENST00000275233 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
SHPRH-201ENST00000275233 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
SHPRH-201ENST00000275233 ABCA10Q8WWZ4 1543 aa13.51□□□□□ -0.25
SHPRH-201ENST00000275233 CCDC50Q8IVM0 306 aa13.5□□□□□ -0.25
SHPRH-201ENST00000275233 TSPYL6Q8N831 410 aa13.5□□□□□ -0.25
SHPRH-201ENST00000275233 UIMC1Q96RL1 719 aa13.5□□□□□ -0.25
SHPRH-201ENST00000275233 DNAJC25Q9H1X3 360 aa13.5□□□□□ -0.25
SHPRH-201ENST00000275233 GTF2F1P35269 517 aaKnown RBP eCLIP13.5□□□□□ -0.25
SHPRH-201ENST00000275233 ZYXQ15942 572 aaKnown RBP13.5□□□□□ -0.25
SHPRH-201ENST00000275233 GPCPD1Q9NPB8 672 aa13.5□□□□□ -0.25
SHPRH-201ENST00000275233 HARSP12081 509 aaKnown RBP13.5□□□□□ -0.25
SHPRH-201ENST00000275233 THOC2Q8NI27 1593 aaKnown RBP13.5□□□□□ -0.25
SHPRH-201ENST00000275233 FERP16591 822 aa13.5□□□□□ -0.25
SHPRH-201ENST00000275233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.49□□□□□ -0.25
SHPRH-201ENST00000275233 TBC1D32Q96NH3 1257 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 RNF113AO15541 343 aaKnown RBP13.49□□□□□ -0.25
SHPRH-201ENST00000275233 KCNG4Q8TDN1 519 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 BACH1O14867 736 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 CCDC172P0C7W6 258 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 PRKG1Q13976 671 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 IFI16Q16666 785 aaKnown RBP13.49□□□□□ -0.25
SHPRH-201ENST00000275233 GIMAP7Q8NHV1 300 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.257e-8■■□□□ 14.4
SHPRH-201ENST00000275233 RIMS2Q9UQ26 1411 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 IL16Q14005 1332 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 GNAQP50148 359 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 MRPS27Q92552 414 aaKnown RBP13.49□□□□□ -0.25
SHPRH-201ENST00000275233 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
SHPRH-201ENST00000275233 CAPZA3Q96KX2 299 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 NEMFO60524 1076 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 HSF2BPO75031 334 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 IMPG2Q9BZV3 1241 aa13.49□□□□□ -0.25
SHPRH-201ENST00000275233 CHMP2AO43633 222 aa13.48□□□□□ -0.25
SHPRH-201ENST00000275233 LMOD1P29536 600 aaPredicted RBP13.48□□□□□ -0.25
SHPRH-201ENST00000275233 PPP4R3BQ5MIZ7 849 aa13.48□□□□□ -0.25
SHPRH-201ENST00000275233 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
SHPRH-201ENST00000275233 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
SHPRH-201ENST00000275233 PROCA1Q8NCQ7 364 aaPredicted RBP13.48□□□□□ -0.25
SHPRH-201ENST00000275233 RTL1A6NKG5 1358 aa13.48□□□□□ -0.25
SHPRH-201ENST00000275233 ANKRD44Q8N8A2 993 aa13.48□□□□□ -0.25
SHPRH-201ENST00000275233 FAM89AQ96GI7 184 aa13.48□□□□□ -0.25
SHPRH-201ENST00000275233 SMIM23A6NLE4 172 aa13.48□□□□□ -0.25
SHPRH-201ENST00000275233 CCDC129Q6ZRS4 1044 aa13.48□□□□□ -0.25
SHPRH-201ENST00000275233 RBM17Q96I25 401 aaKnown RBP13.48□□□□□ -0.25
SHPRH-201ENST00000275233 PSMA7O14818 248 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 ALDH1L1O75891 902 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 APBB1IPQ7Z5R6 666 aaPredicted RBP13.47□□□□□ -0.25
SHPRH-201ENST00000275233 CYLC1P35663 651 aaPredicted RBP13.47□□□□□ -0.25
SHPRH-201ENST00000275233 PLCB3Q01970 1234 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 DCAF17Q5H9S7 520 aaPredicted RBP13.47□□□□□ -0.25
SHPRH-201ENST00000275233 KRT79Q5XKE5 535 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 TRIM75PA6NK02 468 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 USP37Q86T82 979 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 CEP112Q8N8E3 955 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 CCDC63Q8NA47 563 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 UFL1O94874 794 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 UBXN1Q04323 297 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 TAF12Q16514 161 aa13.47□□□□□ -0.25
SHPRH-201ENST00000275233 NBPF14Q5TI25 921 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms