RNA–Protein interactions for RNA: ENST00000275227.8

SLC18B1-201, Transcript of solute carrier family 18 member B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC18B1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC18B1-201ENST00000275227 MCAMP43121 646 aa20.33■□□□□ 0.85
SLC18B1-201ENST00000275227 AKAP11Q9UKA4 1901 aa20.33■□□□□ 0.84
SLC18B1-201ENST00000275227 LAMA4Q16363 1823 aa20.33■□□□□ 0.84
SLC18B1-201ENST00000275227 TOM1O60784 492 aa20.32■□□□□ 0.84
SLC18B1-201ENST00000275227 STK3Q13188 491 aa20.32■□□□□ 0.84
SLC18B1-201ENST00000275227 LRRC2Q9BYS8 371 aa20.32■□□□□ 0.84
SLC18B1-201ENST00000275227 FAM98CQ17RN3 349 aaKnown RBP20.32■□□□□ 0.84
SLC18B1-201ENST00000275227 Q6ZUG5 572 aa20.32■□□□□ 0.84
SLC18B1-201ENST00000275227 MBD3O95983 291 aa20.31■□□□□ 0.84
SLC18B1-201ENST00000275227 TTLL5Q6EMB2 1281 aa20.31■□□□□ 0.84
SLC18B1-201ENST00000275227 ABCC12Q96J65 1359 aa20.31■□□□□ 0.84
SLC18B1-201ENST00000275227 PDE8BO95263 885 aa20.31■□□□□ 0.84
SLC18B1-201ENST00000275227 TMEM87AQ8NBN3 555 aa20.31■□□□□ 0.84
SLC18B1-201ENST00000275227 HELBQ8NG08 1087 aaPredicted RBP20.3■□□□□ 0.84
SLC18B1-201ENST00000275227 BCL9LQ86UU0 1499 aa20.3■□□□□ 0.84
SLC18B1-201ENST00000275227 VPS37CA5D8V6 355 aaPredicted RBP20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 UTP14AQ9BVJ6 771 aaKnown RBP20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 SEC31BQ9NQW1 1179 aa20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 DDX60Q8IY21 1712 aaKnown RBP20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 COL5A3P25940 1745 aaPredicted RBP20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 PHKA1P46020 1223 aa20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 WASHC4Q2M389 1173 aa20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 GTF3C6Q969F1 213 aa20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 PUS7LQ9H0K6 701 aaKnown RBP20.29■□□□□ 0.84
SLC18B1-201ENST00000275227 E7EWF7 191 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 NTSR2O95665 410 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 CDC37L1Q7L3B6 337 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 PTF1AQ7RTS3 328 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 BRF1Q92994 677 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 AK7Q96M32 723 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 C8orf37Q96NL8 207 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 SNAP23O00161 211 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 ZFYP08048 801 aaPredicted RBP20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 FGFR2P21802 821 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 KCNQ4P56696 695 aa20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 LARP1BQ659C4 914 aaKnown RBP20.28■□□□□ 0.84
SLC18B1-201ENST00000275227 MYH7P12883 1935 aa20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 SYCE3A1L190 88 aa20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 JAK2O60674 1132 aa20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 EXOSC10Q01780 885 aaKnown RBP20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 DHX32Q7L7V1 743 aaKnown RBP20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 APPBP2Q92624 585 aa20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 ZNF512BQ96KM6 892 aaPredicted RBP20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 PIH1D3Q9NQM4 214 aaKnown RBP20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 NIP7Q9Y221 180 aaKnown RBP eCLIP20.27■□□□□ 0.84
SLC18B1-201ENST00000275227 DNM1Q05193 864 aaKnown RBP20.27■□□□□ 0.83
SLC18B1-201ENST00000275227 CCDC102BQ68D86 513 aa20.27■□□□□ 0.83
SLC18B1-201ENST00000275227 LINC00116Q8NCU8 138 aa20.27■□□□□ 0.83
SLC18B1-201ENST00000275227 COL4A1P02462 1669 aa20.26■□□□□ 0.83
SLC18B1-201ENST00000275227 PARP10Q53GL7 1025 aa20.26■□□□□ 0.83
SLC18B1-201ENST00000275227 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
SLC18B1-201ENST00000275227 RBSNQ9H1K0 784 aa20.26■□□□□ 0.83
SLC18B1-201ENST00000275227 MYO5AQ9Y4I1 1855 aaKnown RBP20.26■□□□□ 0.83
SLC18B1-201ENST00000275227 FIBPO43427 364 aa20.26■□□□□ 0.83
SLC18B1-201ENST00000275227 CLCN1P35523 988 aa20.26■□□□□ 0.83
SLC18B1-201ENST00000275227 PUM3Q15397 648 aaKnown RBP20.26■□□□□ 0.83
SLC18B1-201ENST00000275227 ARAP2Q8WZ64 1704 aa20.25■□□□□ 0.83
SLC18B1-201ENST00000275227 MROH5Q6ZUA9 1318 aa20.25■□□□□ 0.83
SLC18B1-201ENST00000275227 HMGB1P09429 215 aaKnown RBP20.25■□□□□ 0.83
SLC18B1-201ENST00000275227 VPS72Q15906 364 aa20.25■□□□□ 0.83
SLC18B1-201ENST00000275227 LRRFIP1Q32MZ4 808 aaKnown RBP20.25■□□□□ 0.83
SLC18B1-201ENST00000275227 NGLY1Q96IV0 654 aa20.25■□□□□ 0.83
SLC18B1-201ENST00000275227 UBAP1LF5GYI3 381 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 ARID4AP29374 1257 aaPredicted RBP20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 FERMT3Q86UX7 667 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 AGXT2Q9BYV1 514 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 ATP6V1DQ9Y5K8 247 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 BCORQ6W2J9 1755 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 ESPNB1AK53 854 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 HAND2P61296 217 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 SCRN1Q12765 414 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 SMIM5Q71RC9 77 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 CHST3Q7LGC8 479 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 LPIN2Q92539 896 aa20.24■□□□□ 0.83
SLC18B1-201ENST00000275227 GPAA1O43292 621 aa20.23■□□□□ 0.83
SLC18B1-201ENST00000275227 FGAP02671 866 aa20.23■□□□□ 0.83
SLC18B1-201ENST00000275227 ADD2P35612 726 aa20.23■□□□□ 0.83
SLC18B1-201ENST00000275227 APOBRQ0VD83 1088 aa20.23■□□□□ 0.83
SLC18B1-201ENST00000275227 LRSAM1Q6UWE0 723 aa20.23■□□□□ 0.83
SLC18B1-201ENST00000275227 LAMB2P55268 1798 aa20.23■□□□□ 0.83
SLC18B1-201ENST00000275227 FAM173BQ6P4H8 233 aa20.23■□□□□ 0.83
SLC18B1-201ENST00000275227 PDCP20941 246 aa20.22■□□□□ 0.83
SLC18B1-201ENST00000275227 SLC9C2Q5TAH2 1124 aa20.22■□□□□ 0.83
SLC18B1-201ENST00000275227 TRIM44Q96DX7 344 aaPredicted RBP20.22■□□□□ 0.83
SLC18B1-201ENST00000275227 PFKFB2O60825 505 aa20.22■□□□□ 0.83
SLC18B1-201ENST00000275227 FGD1P98174 961 aa20.22■□□□□ 0.83
SLC18B1-201ENST00000275227 TPRNQ4KMQ1 711 aa20.22■□□□□ 0.83
SLC18B1-201ENST00000275227 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
SLC18B1-201ENST00000275227 ATRNO75882 1429 aa20.21■□□□□ 0.83
SLC18B1-201ENST00000275227 CCDC152Q4G0S7 254 aa20.21■□□□□ 0.83
SLC18B1-201ENST00000275227 MPHOSPH8Q99549 860 aa20.21■□□□□ 0.83
SLC18B1-201ENST00000275227 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.21■□□□□ 0.834e-6■■□□□ 12.4
SLC18B1-201ENST00000275227 GPHNQ9NQX3 736 aaPredicted RBP20.21■□□□□ 0.83
SLC18B1-201ENST00000275227 WWC3Q9ULE0 1092 aa20.21■□□□□ 0.83
SLC18B1-201ENST00000275227 RTL9Q8NET4 1388 aa20.21■□□□□ 0.83
SLC18B1-201ENST00000275227 IDH1O75874 414 aaKnown RBP20.21■□□□□ 0.83
SLC18B1-201ENST00000275227 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
SLC18B1-201ENST00000275227 C3orf67Q6ZVT6 689 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms