RNA–Protein interactions for RNA: ENST00000273482.10

TRPC1-201, Transcript of transient receptor potential cation channel subfamily C member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPC1, Length 4,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1-201ENST00000273482 IKQ13123 557 aaPredicted RBP19.76■□□□□ 0.75
TRPC1-201ENST00000273482 NMIQ13287 307 aaPredicted RBP19.76■□□□□ 0.75
TRPC1-201ENST00000273482 CCDC24Q8N4L8 307 aa19.76■□□□□ 0.75
TRPC1-201ENST00000273482 FRMPD1Q5SYB0 1578 aa19.76■□□□□ 0.75
TRPC1-201ENST00000273482 HMGB1P09429 215 aaKnown RBP19.76■□□□□ 0.75
TRPC1-201ENST00000273482 SLC4A8Q2Y0W8 1093 aa19.76■□□□□ 0.75
TRPC1-201ENST00000273482 DBNDD2Q9BQY9 259 aa19.76■□□□□ 0.75
TRPC1-201ENST00000273482 UTP14AQ9BVJ6 771 aaKnown RBP19.76■□□□□ 0.75
TRPC1-201ENST00000273482 TSPYL1Q9H0U9 437 aa19.76■□□□□ 0.75
TRPC1-201ENST00000273482 ARHGAP29Q52LW3 1261 aa19.75■□□□□ 0.75
TRPC1-201ENST00000273482 CCDC150Q8NCX0 1101 aa19.75■□□□□ 0.75
TRPC1-201ENST00000273482 SGSM2O43147 1006 aa19.75■□□□□ 0.75
TRPC1-201ENST00000273482 CASQ1P31415 396 aa19.75■□□□□ 0.75
TRPC1-201ENST00000273482 XBP1P17861 261 aa19.75■□□□□ 0.75
TRPC1-201ENST00000273482 POLR3DP05423 398 aaPredicted RBP19.74■□□□□ 0.75
TRPC1-201ENST00000273482 NLRP3Q96P20 1036 aa19.74■□□□□ 0.75
TRPC1-201ENST00000273482 GNPATO15228 680 aa19.74■□□□□ 0.75
TRPC1-201ENST00000273482 CREB3L3Q68CJ9 461 aa19.74■□□□□ 0.75
TRPC1-201ENST00000273482 DZIP1Q86YF9 867 aaKnown RBP19.74■□□□□ 0.75
TRPC1-201ENST00000273482 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
TRPC1-201ENST00000273482 BEND3Q5T5X7 828 aa19.74■□□□□ 0.75
TRPC1-201ENST00000273482 ANKRD18AQ8IVF6 992 aa19.74■□□□□ 0.75
TRPC1-201ENST00000273482 TRIM22Q8IYM9 498 aa19.74■□□□□ 0.75
TRPC1-201ENST00000273482 CCDC47Q96A33 483 aaKnown RBP19.74■□□□□ 0.75
TRPC1-201ENST00000273482 CBX8Q9HC52 389 aa19.74■□□□□ 0.75
TRPC1-201ENST00000273482 ERVV-2B6SEH9 535 aa19.73■□□□□ 0.75
TRPC1-201ENST00000273482 ANKARQ7Z5J8 1434 aa19.73■□□□□ 0.75
TRPC1-201ENST00000273482 ADGRL3Q9HAR2 1447 aa19.73■□□□□ 0.75
TRPC1-201ENST00000273482 HSPA4P34932 840 aa19.73■□□□□ 0.75
TRPC1-201ENST00000273482 RUFY3Q7L099 469 aa19.73■□□□□ 0.75
TRPC1-201ENST00000273482 ZSCAN29Q8IWY8 852 aaPredicted RBP19.73■□□□□ 0.75
TRPC1-201ENST00000273482 RAD50Q92878 1312 aa19.73■□□□□ 0.75
TRPC1-201ENST00000273482 FAM182BQ5T319 152 aa19.73■□□□□ 0.75
TRPC1-201ENST00000273482 GNG11P61952 73 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 RTCBQ9Y3I0 505 aaKnown RBP19.72■□□□□ 0.75
TRPC1-201ENST00000273482 CPSF1Q10570 1443 aaKnown RBP19.72■□□□□ 0.75
TRPC1-201ENST00000273482 NAP1L1P55209 391 aaKnown RBP19.72■□□□□ 0.75
TRPC1-201ENST00000273482 SLC9C2Q5TAH2 1124 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 CCDC191Q8NCU4 936 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 SPATA31A3Q5VYP0 1347 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 TTC41PQ6P2S7 1318 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 WDR17Q8IZU2 1322 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 PNPLA6Q8IY17 1366 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 KIF4BQ2VIQ3 1234 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 JAKMIP3Q5VZ66 844 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 ZSWIM4Q9H7M6 989 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 PAG1Q9NWQ8 432 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 RANBP6O60518 1105 aaKnown RBP19.72■□□□□ 0.75
TRPC1-201ENST00000273482 CARD10Q9BWT7 1032 aa19.72■□□□□ 0.75
TRPC1-201ENST00000273482 EPB41L2O43491 1005 aaKnown RBP19.71■□□□□ 0.75
TRPC1-201ENST00000273482 CDKL5O76039 1030 aa19.71■□□□□ 0.75
TRPC1-201ENST00000273482 USP5P45974 858 aa19.71■□□□□ 0.75
TRPC1-201ENST00000273482 ZNF75DP51815 510 aa19.71■□□□□ 0.75
TRPC1-201ENST00000273482 EDC3Q96F86 508 aaKnown RBP19.71■□□□□ 0.75
TRPC1-201ENST00000273482 PDLIM2Q96JY6 352 aa19.71■□□□□ 0.75
TRPC1-201ENST00000273482 A0A1B0GUL7 405 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 CYP27B1O15528 508 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 LMAN1P49257 510 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 EYA2O00167 538 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 SYT10Q6XYQ8 523 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 CCDC144CPQ8IYA2 1237 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 BRMS1Q9HCU9 246 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 USP21Q9UK80 565 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 LRMPQ12912 555 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.7■□□□□ 0.748e-7■■■□□ 18.2
TRPC1-201ENST00000273482 JAG2Q9Y219 1238 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 ITGA6P23229 1130 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 MRPS27Q92552 414 aaKnown RBP19.7■□□□□ 0.74
TRPC1-201ENST00000273482 KIF2CQ99661 725 aa19.7■□□□□ 0.74
TRPC1-201ENST00000273482 LMOD1P29536 600 aaPredicted RBP19.69■□□□□ 0.74
TRPC1-201ENST00000273482 KCNQ4P56696 695 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 Q6ZUG5 572 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.69■□□□□ 0.74
TRPC1-201ENST00000273482 ERO1AQ96HE7 468 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 CDCA7Q9BWT1 371 aaPredicted RBP19.69■□□□□ 0.74
TRPC1-201ENST00000273482 WWC3Q9ULE0 1092 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 PYCARDQ9ULZ3 195 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 ADGRB1O14514 1584 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 MCMDC2Q4G0Z9 681 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 CCNL1Q9UK58 526 aaPredicted RBP19.69■□□□□ 0.74
TRPC1-201ENST00000273482 KIF24Q5T7B8 1368 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 SH3TC1Q8TE82 1336 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 KIF5CO60282 957 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 GABPB1Q06547 395 aaPredicted RBP19.69■□□□□ 0.74
TRPC1-201ENST00000273482 SSH3Q8TE77 659 aa19.69■□□□□ 0.74
TRPC1-201ENST00000273482 TNNI3KQ59H18 835 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 KLHL10Q6JEL2 608 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 GTF3C6Q969F1 213 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 ORC3Q9UBD5 711 aaPredicted RBP19.68■□□□□ 0.74
TRPC1-201ENST00000273482 FPGT-TNNI3KV9GXZ4 949 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 UBASH3AP57075 661 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 CHST3Q7LGC8 479 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 FAM193AP78312 1265 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 TPTE2Q6XPS3 522 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 CNNM3Q8NE01 707 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 ARFGAP3Q9NP61 516 aa19.68■□□□□ 0.74
TRPC1-201ENST00000273482 GOLGA8BA8MQT2 603 aa19.67■□□□□ 0.74
TRPC1-201ENST00000273482 TTF1Q15361 905 aaPredicted RBP19.67■□□□□ 0.74
TRPC1-201ENST00000273482 CPLX3Q8WVH0 158 aa19.67■□□□□ 0.74
TRPC1-201ENST00000273482 GBP3Q9H0R5 595 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms