RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 SNAP23O00161 211 aa23.87■■□□□ 1.41
RAB5A-201ENST00000273047 IRS4O14654 1257 aaPredicted RBP23.87■■□□□ 1.41
RAB5A-201ENST00000273047 HCLS1P14317 486 aaPredicted RBP23.87■■□□□ 1.41
RAB5A-201ENST00000273047 HS1BP3Q53T59 392 aa23.87■■□□□ 1.41
RAB5A-201ENST00000273047 PUS7LQ9H0K6 701 aaKnown RBP23.87■■□□□ 1.41
RAB5A-201ENST00000273047 FOXP2O15409 715 aa23.86■■□□□ 1.41
RAB5A-201ENST00000273047 PDLIM2Q96JY6 352 aa23.86■■□□□ 1.41
RAB5A-201ENST00000273047 RBM10P98175 930 aaKnown RBP23.86■■□□□ 1.41
RAB5A-201ENST00000273047 DSCC1Q9BVC3 393 aa23.86■■□□□ 1.41
RAB5A-201ENST00000273047 CNNM1Q9NRU3 951 aa23.86■■□□□ 1.41
RAB5A-201ENST00000273047 RIPOR2Q9Y4F9 1068 aa23.86■■□□□ 1.41
RAB5A-201ENST00000273047 UBN2Q6ZU65 1347 aa23.86■■□□□ 1.41
RAB5A-201ENST00000273047 ATP2B3Q16720 1220 aa23.85■■□□□ 1.41
RAB5A-201ENST00000273047 DHX32Q7L7V1 743 aaKnown RBP23.85■■□□□ 1.41
RAB5A-201ENST00000273047 DZIP3Q86Y13 1208 aaKnown RBP23.85■■□□□ 1.41
RAB5A-201ENST00000273047 DISP2A7MBM2 1401 aa23.85■■□□□ 1.41
RAB5A-201ENST00000273047 CTSWP56202 376 aa23.85■■□□□ 1.41
RAB5A-201ENST00000273047 AKAP2Q9Y2D5 859 aa23.85■■□□□ 1.41
RAB5A-201ENST00000273047 MCAMP43121 646 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 CAMK4Q16566 473 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 NOL7Q9UMY1 257 aaKnown RBP23.84■■□□□ 1.41
RAB5A-201ENST00000273047 R3HCC1Q9Y3T6 440 aaKnown RBP23.84■■□□□ 1.41
RAB5A-201ENST00000273047 RIC1Q4ADV7 1423 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 PHF14O94880 888 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 LIG1P18858 919 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 PDCP20941 246 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 KRT85P78386 507 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 CEBPZQ03701 1054 aaKnown RBP23.84■■□□□ 1.41
RAB5A-201ENST00000273047 RAB11FIP4Q86YS3 637 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 PLA2G12BQ9BX93 195 aa23.84■■□□□ 1.41
RAB5A-201ENST00000273047 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.83■■□□□ 1.41
RAB5A-201ENST00000273047 CTDNEP1O95476 244 aa23.83■■□□□ 1.41
RAB5A-201ENST00000273047 ZNF500O60304 480 aaPredicted RBP23.82■■□□□ 1.4
RAB5A-201ENST00000273047 EXOSC10Q01780 885 aaKnown RBP23.82■■□□□ 1.4
RAB5A-201ENST00000273047 ANKRD18BA2A2Z9 1011 aa23.81■■□□□ 1.4
RAB5A-201ENST00000273047 GUCY1B3Q02153 619 aa23.81■■□□□ 1.4
RAB5A-201ENST00000273047 DENND2AQ9ULE3 1009 aa23.81■■□□□ 1.4
RAB5A-201ENST00000273047 FGAP02671 866 aa23.81■■□□□ 1.4
RAB5A-201ENST00000273047 FTOQ9C0B1 505 aaKnown RBP eCLIP23.81■■□□□ 1.42e-23■□□□□ 10.5
RAB5A-201ENST00000273047 USP25Q9UHP3 1055 aa23.81■■□□□ 1.4
RAB5A-201ENST00000273047 MYO5AQ9Y4I1 1855 aaKnown RBP23.81■■□□□ 1.4
RAB5A-201ENST00000273047 NUP98P52948 1817 aa23.81■■□□□ 1.4
RAB5A-201ENST00000273047 NUTM2BA6NNL0 878 aaPredicted RBP23.8■■□□□ 1.4
RAB5A-201ENST00000273047 NUTM2EB1AL46 878 aaPredicted RBP23.8■■□□□ 1.4
RAB5A-201ENST00000273047 H3BQV1 296 aa23.8■■□□□ 1.4
RAB5A-201ENST00000273047 IFFO2Q5TF58 517 aa23.8■■□□□ 1.4
RAB5A-201ENST00000273047 NUTM2AQ8IVF1 878 aaPredicted RBP23.8■■□□□ 1.4
RAB5A-201ENST00000273047 FAM184AQ8NB25 1140 aa23.8■■□□□ 1.4
RAB5A-201ENST00000273047 ROBO1Q9Y6N7 1651 aa23.8■■□□□ 1.4
RAB5A-201ENST00000273047 NSUN7Q8NE18 718 aaKnown RBP23.8■■□□□ 1.4
RAB5A-201ENST00000273047 SPATA32Q96LK8 384 aa23.8■■□□□ 1.4
RAB5A-201ENST00000273047 NKX2-3Q8TAU0 364 aa23.79■■□□□ 1.4
RAB5A-201ENST00000273047 PHKA1P46020 1223 aa23.79■■□□□ 1.4
RAB5A-201ENST00000273047 PLCB2Q00722 1185 aa23.79■■□□□ 1.4
RAB5A-201ENST00000273047 LRP6O75581 1613 aa23.79■■□□□ 1.4
RAB5A-201ENST00000273047 PTPDC1A2A3K4 754 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 PFKFB2O60825 505 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 SLIT2O94813 1529 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 CDHR2Q9BYE9 1310 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 COL16A1Q07092 1604 aaPredicted RBP23.78■■□□□ 1.4
RAB5A-201ENST00000273047 CSPP1Q1MSJ5 1256 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 VGLL2Q8N8G2 317 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.78■■□□□ 1.4
RAB5A-201ENST00000273047 LEO1Q8WVC0 666 aaPredicted RBP23.78■■□□□ 1.4
RAB5A-201ENST00000273047 FAM13BQ9NYF5 915 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 TAOK2Q9UL54 1235 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 NWD2Q9ULI1 1742 aa23.78■■□□□ 1.4
RAB5A-201ENST00000273047 GPAA1O43292 621 aa23.77■■□□□ 1.4
RAB5A-201ENST00000273047 IDH1O75874 414 aaKnown RBP23.77■■□□□ 1.4
RAB5A-201ENST00000273047 HMGB1P09429 215 aaKnown RBP23.77■■□□□ 1.4
RAB5A-201ENST00000273047 SUSD4Q5VX71 490 aa23.77■■□□□ 1.4
RAB5A-201ENST00000273047 SEC31BQ9NQW1 1179 aa23.77■■□□□ 1.4
RAB5A-201ENST00000273047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.77■■□□□ 1.4
RAB5A-201ENST00000273047 PDIA3P30101 505 aaKnown RBP23.77■■□□□ 1.4
RAB5A-201ENST00000273047 ATP6V1AP38606 617 aa23.77■■□□□ 1.4
RAB5A-201ENST00000273047 RESTQ13127 1097 aa23.77■■□□□ 1.4
RAB5A-201ENST00000273047 SLC9C2Q5TAH2 1124 aa23.77■■□□□ 1.4
RAB5A-201ENST00000273047 CKAP2LQ8IYA6 745 aa23.77■■□□□ 1.4
RAB5A-201ENST00000273047 PIH1D3Q9NQM4 214 aaKnown RBP23.77■■□□□ 1.4
RAB5A-201ENST00000273047 COL14A1Q05707 1796 aaKnown RBP23.76■■□□□ 1.39
RAB5A-201ENST00000273047 KCNQ4P56696 695 aa23.76■■□□□ 1.39
RAB5A-201ENST00000273047 AKAP11Q9UKA4 1901 aa23.76■■□□□ 1.39
RAB5A-201ENST00000273047 PDE8AO60658 829 aa23.76■■□□□ 1.39
RAB5A-201ENST00000273047 PDE8BO95263 885 aa23.76■■□□□ 1.39
RAB5A-201ENST00000273047 INTS5Q6P9B9 1019 aaKnown RBP23.76■■□□□ 1.39
RAB5A-201ENST00000273047 PGBD1Q96JS3 809 aa23.76■■□□□ 1.39
RAB5A-201ENST00000273047 FUCA2Q9BTY2 467 aa23.76■■□□□ 1.39
RAB5A-201ENST00000273047 DACT1Q9NYF0 836 aa23.76■■□□□ 1.39
RAB5A-201ENST00000273047 FBXO3Q9UK99 471 aa23.76■■□□□ 1.39
RAB5A-201ENST00000273047 DDB1Q16531 1140 aa23.75■■□□□ 1.39
RAB5A-201ENST00000273047 SMARCC2Q8TAQ2 1214 aa23.75■■□□□ 1.39
RAB5A-201ENST00000273047 APPBP2Q92624 585 aa23.75■■□□□ 1.39
RAB5A-201ENST00000273047 MYH3P11055 1940 aa23.75■■□□□ 1.39
RAB5A-201ENST00000273047 DOT1LQ8TEK3 1739 aa23.75■■□□□ 1.39
RAB5A-201ENST00000273047 IL6STP40189 918 aaPredicted RBP23.75■■□□□ 1.39
RAB5A-201ENST00000273047 CCDC102BQ68D86 513 aa23.75■■□□□ 1.39
RAB5A-201ENST00000273047 SMIM5Q71RC9 77 aa23.75■■□□□ 1.39
RAB5A-201ENST00000273047 ZKSCAN5Q9Y2L8 839 aa23.75■■□□□ 1.39
RAB5A-201ENST00000273047 GOLGA6L4A6NEF3 574 aa23.74■■□□□ 1.39
RAB5A-201ENST00000273047 CRKLP46109 303 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms