RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 NPHP1O15259 732 aa21.84■■□□□ 1.09
CNIH3-201ENST00000272133 SLC39A6Q13433 755 aa21.84■■□□□ 1.09
CNIH3-201ENST00000272133 LAMA4Q16363 1823 aa21.83■■□□□ 1.09
CNIH3-201ENST00000272133 RFX5P48382 616 aaPredicted RBP21.83■■□□□ 1.09
CNIH3-201ENST00000272133 XAGE3Q8WTP9 111 aa21.83■■□□□ 1.09
CNIH3-201ENST00000272133 ZNF396Q96N95 335 aaPredicted RBP21.83■■□□□ 1.09
CNIH3-201ENST00000272133 ORAI2Q96SN7 254 aa21.83■■□□□ 1.08
CNIH3-201ENST00000272133 SLU7O95391 586 aaKnown RBP21.82■■□□□ 1.08
CNIH3-201ENST00000272133 COPS6Q7L5N1 327 aa21.82■■□□□ 1.08
CNIH3-201ENST00000272133 SYTL4Q96C24 671 aaPredicted RBP21.82■■□□□ 1.08
CNIH3-201ENST00000272133 HAUS7Q99871 368 aa21.82■■□□□ 1.08
CNIH3-201ENST00000272133 A0A1B0GVL5 298 aa21.82■■□□□ 1.08
CNIH3-201ENST00000272133 CHST3Q7LGC8 479 aa21.82■■□□□ 1.08
CNIH3-201ENST00000272133 FMR1NBQ8N0W7 255 aaPredicted RBP21.82■■□□□ 1.08
CNIH3-201ENST00000272133 PCDHA7Q9UN72 937 aa21.82■■□□□ 1.08
CNIH3-201ENST00000272133 OVOS2A0A0G2JMS6 1433 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 RFX7Q2KHR2 1363 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 SALL1Q9NSC2 1324 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 TERF2Q15554 542 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 DPCR1Q3MIW9 517 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 E4F1Q66K89 784 aaPredicted RBP21.81■■□□□ 1.08
CNIH3-201ENST00000272133 SDF4Q9BRK5 362 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 NAT10Q9H0A0 1025 aaKnown RBP21.81■■□□□ 1.08
CNIH3-201ENST00000272133 HMGB1P09429 215 aaKnown RBP21.81■■□□□ 1.08
CNIH3-201ENST00000272133 PIP4K2AP48426 406 aaPredicted RBP21.81■■□□□ 1.08
CNIH3-201ENST00000272133 GSDMDP57764 484 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 KCNH5Q8NCM2 988 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 MRPS27Q92552 414 aaKnown RBP21.81■■□□□ 1.08
CNIH3-201ENST00000272133 OSBPL5Q9H0X9 879 aaPredicted RBP21.81■■□□□ 1.08
CNIH3-201ENST00000272133 KCND1Q9NSA2 647 aa21.81■■□□□ 1.08
CNIH3-201ENST00000272133 METTL22Q9BUU2 404 aaPredicted RBP21.8■■□□□ 1.08
CNIH3-201ENST00000272133 PSME1Q06323 249 aa21.8■■□□□ 1.08
CNIH3-201ENST00000272133 NDUFA8P51970 172 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 EXOSC10Q01780 885 aaKnown RBP21.79■■□□□ 1.08
CNIH3-201ENST00000272133 ATL3Q6DD88 541 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 UBE3BQ7Z3V4 1068 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 KBTBD3Q8NAB2 608 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 XPO4Q9C0E2 1151 aaKnown RBP21.79■■□□□ 1.08
CNIH3-201ENST00000272133 ST7Q9NRC1 585 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 ZNF446Q9NWS9 450 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 SH3TC1Q8TE82 1336 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 SIPA1L3O60292 1781 aaPredicted RBP21.79■■□□□ 1.08
CNIH3-201ENST00000272133 SMC2O95347 1197 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 ARMCX5Q6P1M9 558 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 LRRN4CLQ8ND94 238 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 AGXT2Q9BYV1 514 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 FAM53CQ9NYF3 392 aa21.79■■□□□ 1.08
CNIH3-201ENST00000272133 PDIA3P30101 505 aaKnown RBP21.78■■□□□ 1.08
CNIH3-201ENST00000272133 ANKRD24Q8TF21 1146 aa21.78■■□□□ 1.08
CNIH3-201ENST00000272133 PPP1R13BQ96KQ4 1090 aa21.78■■□□□ 1.08
CNIH3-201ENST00000272133 CARMIL3Q8ND23 1372 aa21.78■■□□□ 1.08
CNIH3-201ENST00000272133 ZNF790Q6PG37 636 aa21.78■■□□□ 1.08
CNIH3-201ENST00000272133 TMC6Q7Z403 805 aa21.78■■□□□ 1.08
CNIH3-201ENST00000272133 IFNKQ9P0W0 207 aa21.78■■□□□ 1.08
CNIH3-201ENST00000272133 E7EWF7 191 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 GOLIM4O00461 696 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 ERCC6LQ2NKX8 1250 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 OTUD7BQ6GQQ9 843 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 SYT10Q6XYQ8 523 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 C5P01031 1676 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 ABCC6O95255 1503 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 A0A0U1RQG5 324 aaPredicted RBP21.77■■□□□ 1.08
CNIH3-201ENST00000272133 KIF2AO00139 706 aaPredicted RBP21.77■■□□□ 1.08
CNIH3-201ENST00000272133 FDPSP14324 419 aaKnown RBP21.77■■□□□ 1.08
CNIH3-201ENST00000272133 ADALQ6DHV7 355 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 FMNL2Q96PY5 1086 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 PODXL2Q9NZ53 605 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 IMPACTQ9P2X3 320 aa21.77■■□□□ 1.08
CNIH3-201ENST00000272133 BIN1O00499 593 aa21.76■■□□□ 1.07
CNIH3-201ENST00000272133 KIAA1468Q9P260 1216 aa21.76■■□□□ 1.07
CNIH3-201ENST00000272133 NEDD4P46934 1319 aa21.76■■□□□ 1.07
CNIH3-201ENST00000272133 ANKRD13DQ6ZTN6 518 aa21.76■■□□□ 1.07
CNIH3-201ENST00000272133 L2HGDHQ9H9P8 463 aa21.76■■□□□ 1.07
CNIH3-201ENST00000272133 CLIC4Q9Y696 253 aa21.76■■□□□ 1.07
CNIH3-201ENST00000272133 GCP02774 474 aa21.75■■□□□ 1.07
CNIH3-201ENST00000272133 RTEL1Q9NZ71 1219 aa21.75■■□□□ 1.07
CNIH3-201ENST00000272133 ATP5J2-PTCD1G3V325 749 aa21.75■■□□□ 1.07
CNIH3-201ENST00000272133 PTCD1O75127 700 aaKnown RBP21.75■■□□□ 1.07
CNIH3-201ENST00000272133 POLR3DP05423 398 aaPredicted RBP21.75■■□□□ 1.07
CNIH3-201ENST00000272133 ZRSR1Q15695 479 aaKnown RBP21.75■■□□□ 1.07
CNIH3-201ENST00000272133 RABL6Q3YEC7 729 aaPredicted RBP21.75■■□□□ 1.07
CNIH3-201ENST00000272133 ARHGEF25Q86VW2 580 aa21.75■■□□□ 1.07
CNIH3-201ENST00000272133 PROSER2Q86WR7 435 aaPredicted RBP21.75■■□□□ 1.07
CNIH3-201ENST00000272133 LINC00301Q8NCQ3 95 aa21.75■■□□□ 1.07
CNIH3-201ENST00000272133 DSCC1Q9BVC3 393 aa21.75■■□□□ 1.07
CNIH3-201ENST00000272133 PHRF1Q9P1Y6 1649 aaKnown RBP21.74■■□□□ 1.07
CNIH3-201ENST00000272133 HSPD1P10809 573 aaKnown RBP21.74■■□□□ 1.07
CNIH3-201ENST00000272133 SFPQP23246 707 aaKnown RBP eCLIP21.74■■□□□ 1.07
CNIH3-201ENST00000272133 GPHNQ9NQX3 736 aaPredicted RBP21.74■■□□□ 1.07
CNIH3-201ENST00000272133 PAG1Q9NWQ8 432 aa21.74■■□□□ 1.07
CNIH3-201ENST00000272133 SF3A1Q15459 793 aaKnown RBP21.74■■□□□ 1.07
CNIH3-201ENST00000272133 CCDC150Q8NCX0 1101 aa21.74■■□□□ 1.07
CNIH3-201ENST00000272133 AXIN2Q9Y2T1 843 aa21.74■■□□□ 1.07
CNIH3-201ENST00000272133 STK38Q15208 465 aa21.73■■□□□ 1.07
CNIH3-201ENST00000272133 TAF3Q5VWG9 929 aa21.73■■□□□ 1.07
CNIH3-201ENST00000272133 ZNF274Q96GC6 653 aaPredicted RBP21.73■■□□□ 1.07
CNIH3-201ENST00000272133 NEUROD6Q96NK8 337 aa21.73■■□□□ 1.07
CNIH3-201ENST00000272133 PALLDQ8WX93 1383 aa21.73■■□□□ 1.07
CNIH3-201ENST00000272133 A0A1W2PQ27 194 aa21.73■■□□□ 1.07
CNIH3-201ENST00000272133 A0A1W2PQ64 194 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms