RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MARF1Q9Y4F3 1742 aaKnown RBP19.68■□□□□ 0.74
SQLE-201ENST00000265896 SMC2O95347 1197 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 IFIT1P09914 478 aaKnown RBP19.68■□□□□ 0.74
SQLE-201ENST00000265896 KRT32Q14532 448 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 GORABQ5T7V8 394 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 KBTBD3Q8NAB2 608 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 NKX2-3Q8TAU0 364 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 UTYO14607 1347 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 SNRPA1P09661 255 aaKnown RBP19.68■□□□□ 0.74
SQLE-201ENST00000265896 NDUFA8P51970 172 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 DPCR1Q3MIW9 517 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 USPL1Q5W0Q7 1092 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 LRRC8AQ8IWT6 810 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 ANKARQ7Z5J8 1434 aa19.68■□□□□ 0.74
SQLE-201ENST00000265896 UBE2Q2LH0YL09 131 aa19.67■□□□□ 0.74
SQLE-201ENST00000265896 OSBP2Q969R2 916 aa19.67■□□□□ 0.74
SQLE-201ENST00000265896 TMX1Q9H3N1 280 aa19.67■□□□□ 0.74
SQLE-201ENST00000265896 PCDHA7Q9UN72 937 aa19.67■□□□□ 0.74
SQLE-201ENST00000265896 NBPF26B4DH59 902 aa19.67■□□□□ 0.74
SQLE-201ENST00000265896 PDIA3P30101 505 aaKnown RBP19.67■□□□□ 0.74
SQLE-201ENST00000265896 NBPF14Q5TI25 921 aa19.67■□□□□ 0.74
SQLE-201ENST00000265896 CEP135Q66GS9 1140 aa19.67■□□□□ 0.74
SQLE-201ENST00000265896 NBPF10Q6P3W6 841 aaKnown RBP19.67■□□□□ 0.74
SQLE-201ENST00000265896 PROSER2Q86WR7 435 aaPredicted RBP19.67■□□□□ 0.74
SQLE-201ENST00000265896 NBPF15Q8N660 670 aa19.67■□□□□ 0.74
SQLE-201ENST00000265896 MAST3O60307 1309 aa19.66■□□□□ 0.74
SQLE-201ENST00000265896 SCARF1Q14162 830 aa19.66■□□□□ 0.74
SQLE-201ENST00000265896 INCENPQ9NQS7 918 aa19.66■□□□□ 0.74
SQLE-201ENST00000265896 ZNF215Q9UL58 517 aaPredicted RBP19.66■□□□□ 0.74
SQLE-201ENST00000265896 NFAT5O94916 1531 aa19.66■□□□□ 0.74
SQLE-201ENST00000265896 HEG1Q9ULI3 1381 aa19.66■□□□□ 0.74
SQLE-201ENST00000265896 A0A1B0GUL7 405 aa19.66■□□□□ 0.74
SQLE-201ENST00000265896 DHX40Q8IX18 779 aaKnown RBP19.66■□□□□ 0.74
SQLE-201ENST00000265896 FDPSP14324 419 aaKnown RBP19.65■□□□□ 0.74
SQLE-201ENST00000265896 ATG9AQ7Z3C6 839 aa19.65■□□□□ 0.74
SQLE-201ENST00000265896 KDM6AO15550 1401 aaPredicted RBP19.65■□□□□ 0.74
SQLE-201ENST00000265896 PFKFB2O60825 505 aa19.65■□□□□ 0.74
SQLE-201ENST00000265896 SMAP1Q8IYB5 467 aaPredicted RBP19.65■□□□□ 0.74
SQLE-201ENST00000265896 LRP10Q7Z4F1 713 aa19.65■□□□□ 0.74
SQLE-201ENST00000265896 LRRN4CLQ8ND94 238 aa19.65■□□□□ 0.74
SQLE-201ENST00000265896 STK38Q15208 465 aa19.64■□□□□ 0.73
SQLE-201ENST00000265896 TPM3P06753 285 aa19.64■□□□□ 0.73
SQLE-201ENST00000265896 LMOD1P29536 600 aaPredicted RBP19.64■□□□□ 0.73
SQLE-201ENST00000265896 STX1AQ16623 288 aa19.64■□□□□ 0.73
SQLE-201ENST00000265896 FAM177A1Q8N128 213 aaPredicted RBP19.63■□□□□ 0.73
SQLE-201ENST00000265896 MYL10Q9BUA6 226 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 KLF18A0A0U1RQI7 1052 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 FOXO4P98177 505 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 SPECC1Q5M775 1068 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 RBM43Q6ZSC3 357 aaKnown RBP19.63■□□□□ 0.73
SQLE-201ENST00000265896 IFNL2Q8IZJ0 200 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 CCDC82Q8N4S0 544 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 FAM89AQ96GI7 184 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 ZSCAN16Q9H4T2 348 aaPredicted RBP19.63■□□□□ 0.73
SQLE-201ENST00000265896 ST7Q9NRC1 585 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 ARHGAP23Q9P227 1491 aa19.63■□□□□ 0.73
SQLE-201ENST00000265896 GOLGA8BA8MQT2 603 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 ZRSR1Q15695 479 aaKnown RBP19.62■□□□□ 0.73
SQLE-201ENST00000265896 TSGA10IPQ3SY00 556 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 TMC6Q7Z403 805 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 SMARCC2Q8TAQ2 1214 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 IFNKQ9P0W0 207 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 PTPN14Q15678 1187 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 RCOR1Q9UKL0 485 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 MED1Q15648 1581 aaPredicted RBP19.62■□□□□ 0.73
SQLE-201ENST00000265896 KIF28PB7ZC32 967 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 ELF2Q15723 593 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 ANKRD7Q92527 254 aa19.62■□□□□ 0.73
SQLE-201ENST00000265896 KDM3BQ7LBC6 1761 aa19.61■□□□□ 0.73
SQLE-201ENST00000265896 APPP05067 770 aa19.61■□□□□ 0.73
SQLE-201ENST00000265896 ATP1A3P13637 1013 aa19.61■□□□□ 0.73
SQLE-201ENST00000265896 PUS7LQ9H0K6 701 aaKnown RBP19.61■□□□□ 0.73
SQLE-201ENST00000265896 FAM160A1Q05DH4 1040 aa19.61■□□□□ 0.73
SQLE-201ENST00000265896 PHKBQ93100 1093 aa19.61■□□□□ 0.73
SQLE-201ENST00000265896 XPO4Q9C0E2 1151 aaKnown RBP19.61■□□□□ 0.73
SQLE-201ENST00000265896 SENP2Q9HC62 589 aa19.61■□□□□ 0.73
SQLE-201ENST00000265896 ORC3Q9UBD5 711 aaPredicted RBP19.61■□□□□ 0.73
SQLE-201ENST00000265896 GOLGB1Q14789 3259 aaKnown RBP19.61■□□□□ 0.73
SQLE-201ENST00000265896 CPLX1O14810 134 aa19.6■□□□□ 0.73
SQLE-201ENST00000265896 C8orf76Q96K31 380 aa19.6■□□□□ 0.73
SQLE-201ENST00000265896 CARMIL3Q8ND23 1372 aa19.6■□□□□ 0.73
SQLE-201ENST00000265896 SLIT1O75093 1534 aa19.6■□□□□ 0.73
SQLE-201ENST00000265896 SMTNL1A8MU46 457 aa19.6■□□□□ 0.73
SQLE-201ENST00000265896 CTIFO43310 598 aaKnown RBP19.6■□□□□ 0.73
SQLE-201ENST00000265896 GPTP24298 496 aa19.6■□□□□ 0.73
SQLE-201ENST00000265896 EXOSC10Q01780 885 aaKnown RBP19.6■□□□□ 0.73
SQLE-201ENST00000265896 SNAP23O00161 211 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 FGAP02671 866 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 DMTNQ08495 405 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 PRC1O43663 620 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 ZAP70P43403 619 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 CEP57L1Q8IYX8 460 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 ENGASEQ8NFI3 743 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 CRYBG1Q9Y4K1 1723 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 ATP2B1P20020 1258 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 CASP7P55210 303 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 CCZ1BP86790 482 aa19.59■□□□□ 0.73
SQLE-201ENST00000265896 CCZ1P86791 482 aaPredicted RBP19.59■□□□□ 0.73
SQLE-201ENST00000265896 MRPS27Q92552 414 aaKnown RBP19.59■□□□□ 0.73
SQLE-201ENST00000265896 MEGF6O75095 1541 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms