RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 ANO8Q9HCE9 1232 aaPredicted RBP9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 PIM2Q9P1W9 311 aa9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 MARCH6O60337 910 aa9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 CCDC93Q567U6 631 aa9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 SYNE4Q8N205 404 aa9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 MAGEB6Q8N7X4 407 aa9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 EAF2Q96CJ1 260 aaPredicted RBP9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 CWC22Q9HCG8 908 aaKnown RBP9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 IBTKQ9P2D0 1353 aaPredicted RBP9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 ATP5JP18859 108 aa9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 PTPN12Q05209 780 aaKnown RBP9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 BSDC1Q9NW68 430 aaPredicted RBP9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 SLC4A4Q9Y6R1 1079 aa9.82□□□□□ -0.84
GTF3C3-201ENST00000263956 GNAT2P19087 354 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 OTUD7AQ8TE49 926 aaPredicted RBP9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 ATP6V1DQ9Y5K8 247 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 MPHOSPH10O00566 681 aaKnown RBP9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 MTX1Q13505 466 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 SAFBQ15424 915 aaKnown RBP eCLIP9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 EPHA10Q5JZY3 1008 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 RBM26Q5T8P6 1007 aaKnown RBP9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 MCTP1Q6DN14 999 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 SPATA5Q8NB90 893 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 BCL9LQ86UU0 1499 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 XBP1P17861 261 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 PDE4BQ07343 736 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 PDRG1Q9NUG6 133 aa9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.81□□□□□ -0.84
GTF3C3-201ENST00000263956 HMGB1P09429 215 aaKnown RBP9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 GYG1P46976 350 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 VPS53Q5VIR6 699 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 IQCA1Q86XH1 822 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 COL23A1Q86Y22 540 aaPredicted RBP9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 RANBP6O60518 1105 aaKnown RBP9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 GTF2IP78347 998 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 NMIQ13287 307 aaPredicted RBP9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 POLA2Q14181 598 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 CSPP1Q1MSJ5 1256 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 CCDC102BQ68D86 513 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 PRR5LQ6MZQ0 368 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 RTKN2Q8IZC4 609 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 CLEC11AQ9Y240 323 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 ESYT1Q9BSJ8 1104 aa9.8□□□□□ -0.84
GTF3C3-201ENST00000263956 ZAP70P43403 619 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 BCAMP50895 628 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 SF3A1Q15459 793 aaKnown RBP9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 KBTBD3Q8NAB2 608 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 CERS3Q8IU89 383 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 MIGA1Q8NAN2 632 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 NUP133Q8WUM0 1156 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 PLA2G12BQ9BX93 195 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 VEZTQ9HBM0 779 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 HMG20BQ9P0W2 317 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 KDM2BQ8NHM5 1336 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 ONECUT3O60422 494 aaPredicted RBP9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 CASTP20810 708 aaKnown RBP9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 DOK7Q18PE1 504 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 GRIPAP1Q4V328 841 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 CABP5Q9NP86 173 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 ATRNO75882 1429 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 RAD50Q92878 1312 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 GYS1P13807 737 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 MFSD6Q6ZSS7 791 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 FOXD4L4Q8WXT5 416 aaPredicted RBP9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 ZSCAN31Q96LW9 406 aaPredicted RBP9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 HELLSQ9NRZ9 838 aa9.79□□□□□ -0.84
GTF3C3-201ENST00000263956 SEMA3EO15041 775 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 RGL2O15211 777 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 SLC4A3P48751 1232 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 TNNI2P48788 182 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 PICALMQ13492 652 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 SF3B3Q15393 1217 aaKnown RBP9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 MFSD14BQ5SR56 506 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 TRIM22Q8IYM9 498 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 APPBP2Q92624 585 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 CCDC34Q96HJ3 373 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 NTSR2O95665 410 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 PTMSP20962 102 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 HAND2P61296 217 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 TTLL5Q6EMB2 1281 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 PTF1AQ7RTS3 328 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 BRMS1Q9HCU9 246 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 C21orf2O43822 256 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 CHMLP26374 656 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 DPY19L2Q6NUT2 758 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 CCAR1Q8IX12 1150 aaKnown RBP9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 TEX11Q8IYF3 940 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 CELF1Q92879 486 aaKnown RBP9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 SLC4A9Q96Q91 983 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 LTN1O94822 1766 aa9.78□□□□□ -0.84
GTF3C3-201ENST00000263956 VPS37CA5D8V6 355 aaPredicted RBP9.77□□□□□ -0.84
GTF3C3-201ENST00000263956 MBD4O95243 580 aa9.77□□□□□ -0.84
GTF3C3-201ENST00000263956 FOXO4P98177 505 aa9.77□□□□□ -0.84
GTF3C3-201ENST00000263956 CRAMP1Q96RY5 1269 aa9.77□□□□□ -0.84
GTF3C3-201ENST00000263956 NF2P35240 595 aa9.77□□□□□ -0.85
GTF3C3-201ENST00000263956 PHKA1P46020 1223 aa9.77□□□□□ -0.85
GTF3C3-201ENST00000263956 SIRT2Q8IXJ6 389 aa9.77□□□□□ -0.85
GTF3C3-201ENST00000263956 TSPY2A6NKD2 308 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms