RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PUM3Q15397 648 aaKnown RBP11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 TTC22Q5TAA0 569 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 STYK1Q6J9G0 422 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 ECHDC1Q9NTX5 307 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 KIAA1551Q9HCM1 1747 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 SLC5A1P13866 664 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 GORABQ5T7V8 394 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 PRPF40BQ6NWY9 871 aaKnown RBP11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 LPIN2Q92539 896 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 BOLA2Q9H3K6 86 aa11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 NSFL1CQ9UNZ2 370 aaKnown RBP11.92□□□□□ -0.5
SNRNP40-201ENST00000263694 BCAMP50895 628 aa11.91□□□□□ -0.5
SNRNP40-201ENST00000263694 TXNRD3Q86VQ6 643 aa11.91□□□□□ -0.5
SNRNP40-201ENST00000263694 SP8Q8IXZ3 490 aa11.91□□□□□ -0.5
SNRNP40-201ENST00000263694 EDC3Q96F86 508 aaKnown RBP11.91□□□□□ -0.5
SNRNP40-201ENST00000263694 ANKRD2Q9GZV1 360 aa11.91□□□□□ -0.5
SNRNP40-201ENST00000263694 ATP6V0A2Q9Y487 856 aa11.91□□□□□ -0.5
SNRNP40-201ENST00000263694 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 TTC41PQ6P2S7 1318 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 C19orf67A6NJJ6 358 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 IFIT1P09914 478 aaKnown RBP11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 SDSP20132 328 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 PHKA1P46020 1223 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 GYG1P46976 350 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 KCNJ4P48050 445 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 SCARF1Q14162 830 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 PI16Q6UXB8 463 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 NLGN2Q8NFZ4 835 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 CNKSR1Q969H4 720 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 GPATCH3Q96I76 525 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 POLLQ9UGP5 575 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 IQSEC3Q9UPP2 1182 aaPredicted RBP11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
SNRNP40-201ENST00000263694 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.51
SNRNP40-201ENST00000263694 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.51
SNRNP40-201ENST00000263694 ZNF804BA4D1E1 1349 aa11.9□□□□□ -0.51
SNRNP40-201ENST00000263694 XDHP47989 1333 aa11.9□□□□□ -0.51
SNRNP40-201ENST00000263694 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
SNRNP40-201ENST00000263694 ATP5JP18859 108 aa11.89□□□□□ -0.51
SNRNP40-201ENST00000263694 UBE4AQ14139 1066 aa11.89□□□□□ -0.51
SNRNP40-201ENST00000263694 TTC39AQ5SRH9 613 aa11.89□□□□□ -0.51
SNRNP40-201ENST00000263694 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
SNRNP40-201ENST00000263694 RILPL2Q969X0 211 aa11.89□□□□□ -0.51
SNRNP40-201ENST00000263694 AOX1Q06278 1338 aa11.89□□□□□ -0.51
SNRNP40-201ENST00000263694 ERC2O15083 957 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 C21orf2O43822 256 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 GLRX3O76003 335 aaKnown RBP11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 UFL1O94874 794 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 TGFB2P61812 414 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 BMP2KLQ5H9B9 411 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 CCDC158Q5M9N0 1113 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 TTLL6Q8N841 843 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 C7orf43Q8WVR3 580 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 FAM84BQ96KN1 310 aaPredicted RBP11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 DNAJC2Q99543 621 aaKnown RBP11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 AK9Q5TCS8 1911 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 IRS2Q9Y4H2 1338 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 AKAP11Q9UKA4 1901 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 SOCS7O14512 581 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 MCAMP43121 646 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 MPNDQ8N594 471 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 TBC1D16Q8TBP0 767 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 PIM2Q9P1W9 311 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 GGA1Q9UJY5 639 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 LEMD3Q9Y2U8 911 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 CD2APQ9Y5K6 639 aa11.88□□□□□ -0.51
SNRNP40-201ENST00000263694 RIMBP2O15034 1052 aa11.87□□□□□ -0.51
SNRNP40-201ENST00000263694 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
SNRNP40-201ENST00000263694 C8orf34Q49A92 452 aa11.87□□□□□ -0.51
SNRNP40-201ENST00000263694 ANTXR1Q9H6X2 564 aa11.87□□□□□ -0.51
SNRNP40-201ENST00000263694 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
SNRNP40-201ENST00000263694 BRCA1P38398 1863 aaKnown RBP11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 ZAP70P43403 619 aa11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 FKBP4Q02790 459 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 DPP8Q6V1X1 898 aaPredicted RBP11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 FBXO33Q7Z6M2 555 aa11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 HAUS7Q99871 368 aa11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 FHDC1Q9C0D6 1143 aaPredicted RBP11.86□□□□□ -0.51
SNRNP40-201ENST00000263694 GOLIM4O00461 696 aa11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 ZBTB22O15209 634 aa11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 CHGBP05060 677 aa11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 ARID4AP29374 1257 aaPredicted RBP11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 HIBADHP31937 336 aaKnown RBP11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 RASGRF1Q13972 1273 aa11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 CAVIN4Q5BKX8 364 aa11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 VPS37DQ86XT2 251 aa11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 TMX4Q9H1E5 349 aaPredicted RBP11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 HMG20BQ9P0W2 317 aa11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 JAG2Q9Y219 1238 aa11.85□□□□□ -0.51
SNRNP40-201ENST00000263694 GOLGB1Q14789 3259 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms