RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 F13A1P00488 732 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 MMRN2Q9H8L6 949 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 TTC41PQ6P2S7 1318 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 CAPN2P17655 700 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 PDE1AP54750 535 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 HEATR3Q7Z4Q2 680 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 CCDC121Q6ZUS5 278 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 RBM8AQ9Y5S9 174 aaKnown RBP19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 KIF3CO14782 793 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 ZBTB3Q9H5J0 574 aa19.77■□□□□ 0.76
NOTCH3-201ENST00000263388 PTGS1P23219 599 aa19.77■□□□□ 0.75
NOTCH3-201ENST00000263388 EXOC5O00471 708 aa19.77■□□□□ 0.75
NOTCH3-201ENST00000263388 ATRIPQ8WXE1 791 aa19.77■□□□□ 0.75
NOTCH3-201ENST00000263388 CALM1P0DP23 149 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 CALM2P0DP24 149 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 CALM3P0DP25 149 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 PHF8Q9UPP1 1060 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 PLB1Q6P1J6 1458 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 CCDC14Q49A88 953 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 VAV2P52735 878 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 BRAPQ7Z569 592 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 NEK11Q8NG66 645 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 PHACTR2O75167 634 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 ATP2A2P16615 1042 aaKnown RBP19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 MRPS9P82933 396 aaKnown RBP19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 MKRN1Q9UHC7 482 aaKnown RBP19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 SPTLC2O15270 562 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 ASIC1P78348 528 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 DACT1Q9NYF0 836 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
NOTCH3-201ENST00000263388 KRT2P35908 639 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 MAP7D1Q3KQU3 841 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 OTUD6BQ8N6M0 293 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 BRF1Q92994 677 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 CCDC42Q96M95 316 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 RSPH14Q9UHP6 348 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 SKAP1Q86WV1 359 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 NECAB1Q8N987 351 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 UBXN1Q04323 297 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 DNM1Q05193 864 aaKnown RBP19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 TRIM75PA6NK02 468 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 CEP128Q6ZU80 1094 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 INTS4Q96HW7 963 aaKnown RBP19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 C6orf50Q9HD87 102 aa19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 CPSF2Q9P2I0 782 aaKnown RBP19.75■□□□□ 0.75
NOTCH3-201ENST00000263388 NUP160Q12769 1436 aa19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 SNRKQ9NRH2 765 aa19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 CHPF2Q9P2E5 772 aa19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 SPDYE3A6NKU9 549 aa19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 PSMD1Q99460 953 aa19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 MARCKSP29966 332 aaPredicted RBP19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 ZFP91Q96JP5 570 aaPredicted RBP19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 CNGA4Q8IV77 575 aa19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 MSANTD4Q8NCY6 345 aa19.74■□□□□ 0.75
NOTCH3-201ENST00000263388 CCDC186Q7Z3E2 898 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 ANKRD44Q8N8A2 993 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 ZNF830Q96NB3 372 aaPredicted RBP19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 RNF216Q9NWF9 866 aaPredicted RBP19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 SERPINA10Q9UK55 444 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 ABCC1P33527 1531 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 HDXQ7Z353 690 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 PAG1Q9NWQ8 432 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 NAPAP54920 295 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 AMOTL2Q9Y2J4 779 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 DNAJC25Q9H1X3 360 aa19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 MTRF1LQ9UGC7 380 aaKnown RBP19.73■□□□□ 0.75
NOTCH3-201ENST00000263388 TXNDC16Q9P2K2 825 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 SLC4A4Q9Y6R1 1079 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 GCC2Q8IWJ2 1684 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 RFC4P35249 363 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 RAB3GAP1Q15042 981 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 RSRC1Q96IZ7 334 aaKnown RBP19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 SWAP70Q9UH65 585 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 FOXO3O43524 673 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 MYO5CQ9NQX4 1742 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 UGGT2Q9NYU1 1516 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 CPLX4Q7Z7G2 160 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 ATP2B3Q16720 1220 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 ARFGAP2Q8N6H7 521 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 KIAA1524Q8TCG1 905 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 STIM2Q9P246 746 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 MRVI1Q9Y6F6 885 aa19.72■□□□□ 0.75
NOTCH3-201ENST00000263388 ATP5DP30049 168 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 IL15P40933 162 aaPredicted RBP19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 PRIM1P49642 420 aaKnown RBP19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 IRX3P78415 501 aaPredicted RBP19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 CLGNO14967 610 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 CYP7A1P22680 504 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 GNA11P29992 359 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 CCDC94Q9BW85 323 aaPredicted RBP19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 HSP90AA4PQ58FG1 418 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 ODF2LQ9ULJ1 636 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 NCBP1Q09161 790 aaKnown RBP19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 TTC31Q49AM3 519 aaPredicted RBP19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 SLC4A8Q2Y0W8 1093 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 NBPF6Q5VWK0 638 aa19.71■□□□□ 0.75
NOTCH3-201ENST00000263388 NBPF5PQ86XG9 351 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms