RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 PFKFB2O60825 505 aa19.41■□□□□ 0.7
ZNF541-201ENST00000263351 NBPF14Q5TI25 921 aa19.41■□□□□ 0.7
ZNF541-201ENST00000263351 NBPF10Q6P3W6 841 aaKnown RBP19.41■□□□□ 0.7
ZNF541-201ENST00000263351 LRRC8AQ8IWT6 810 aa19.41■□□□□ 0.7
ZNF541-201ENST00000263351 NBPF15Q8N660 670 aa19.41■□□□□ 0.7
ZNF541-201ENST00000263351 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
ZNF541-201ENST00000263351 ALDH8A1Q9H2A2 487 aaPredicted RBP19.41■□□□□ 0.7
ZNF541-201ENST00000263351 PAG1Q9NWQ8 432 aa19.41■□□□□ 0.7
ZNF541-201ENST00000263351 U3KPZ7 1027 aaPredicted RBP19.41■□□□□ 0.7
ZNF541-201ENST00000263351 GOLGA6L19H0YKK7 550 aa19.4■□□□□ 0.7
ZNF541-201ENST00000263351 HSPD1P10809 573 aaKnown RBP19.4■□□□□ 0.7
ZNF541-201ENST00000263351 CASP7P55210 303 aa19.4■□□□□ 0.7
ZNF541-201ENST00000263351 ZNF330Q9Y3S2 320 aaPredicted RBP19.4■□□□□ 0.7
ZNF541-201ENST00000263351 PALLDQ8WX93 1383 aa19.4■□□□□ 0.7
ZNF541-201ENST00000263351 MAST3O60307 1309 aa19.4■□□□□ 0.7
ZNF541-201ENST00000263351 DHX32Q7L7V1 743 aaKnown RBP19.4■□□□□ 0.7
ZNF541-201ENST00000263351 CLIC4Q9Y696 253 aa19.4■□□□□ 0.7
ZNF541-201ENST00000263351 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
ZNF541-201ENST00000263351 A1BGP04217 495 aa19.39■□□□□ 0.7
ZNF541-201ENST00000263351 FOXO4P98177 505 aa19.39■□□□□ 0.7
ZNF541-201ENST00000263351 FKBP4Q02790 459 aaKnown RBP eCLIP19.39■□□□□ 0.7
ZNF541-201ENST00000263351 KRT32Q14532 448 aa19.39■□□□□ 0.7
ZNF541-201ENST00000263351 ANKLE2Q86XL3 938 aa19.39■□□□□ 0.7
ZNF541-201ENST00000263351 TTC5Q8N0Z6 440 aa19.39■□□□□ 0.7
ZNF541-201ENST00000263351 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.7
ZNF541-201ENST00000263351 PDIA3P30101 505 aaKnown RBP19.39■□□□□ 0.69
ZNF541-201ENST00000263351 ADORA1P30542 326 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 OSBP2Q969R2 916 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 PCDHA7Q9UN72 937 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 HDAC5Q9UQL6 1122 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 CCDC69A6NI79 296 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 SKILP12757 684 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 RXRAP19793 462 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 NDUFA8P51970 172 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 DPCR1Q3MIW9 517 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 RABL6Q3YEC7 729 aaPredicted RBP19.39■□□□□ 0.69
ZNF541-201ENST00000263351 LRRN4CLQ8ND94 238 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 AIFM3Q96NN9 605 aa19.39■□□□□ 0.69
ZNF541-201ENST00000263351 MRC1P22897 1456 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 BECN2A8MW95 431 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 TPM3P06753 285 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 EXOSC10Q01780 885 aaKnown RBP19.38■□□□□ 0.69
ZNF541-201ENST00000263351 SCARF1Q14162 830 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 ENGASEQ8NFI3 743 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 RCOR1Q9UKL0 485 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 AFDNP55196 1824 aaKnown RBP19.38■□□□□ 0.69
ZNF541-201ENST00000263351 FOXP2O15409 715 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 SNRPA1P09661 255 aaKnown RBP19.38■□□□□ 0.69
ZNF541-201ENST00000263351 DMTNQ08495 405 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 CFAP45Q9UL16 551 aa19.38■□□□□ 0.69
ZNF541-201ENST00000263351 ADGRL3Q9HAR2 1447 aa19.37■□□□□ 0.69
ZNF541-201ENST00000263351 UBE2Q2LH0YL09 131 aa19.37■□□□□ 0.69
ZNF541-201ENST00000263351 CCZ1BP86790 482 aa19.37■□□□□ 0.69
ZNF541-201ENST00000263351 CCZ1P86791 482 aaPredicted RBP19.37■□□□□ 0.69
ZNF541-201ENST00000263351 CEP135Q66GS9 1140 aa19.37■□□□□ 0.69
ZNF541-201ENST00000263351 ZNF215Q9UL58 517 aaPredicted RBP19.37■□□□□ 0.69
ZNF541-201ENST00000263351 KINO60870 393 aaKnown RBP19.36■□□□□ 0.69
ZNF541-201ENST00000263351 GOLGA8FQ08AF8 430 aa19.36■□□□□ 0.69
ZNF541-201ENST00000263351 GOLGA8DPQ0D2H9 430 aa19.36■□□□□ 0.69
ZNF541-201ENST00000263351 CCDC73Q6ZRK6 1079 aa19.36■□□□□ 0.69
ZNF541-201ENST00000263351 NBPF11Q86T75 865 aa19.36■□□□□ 0.69
ZNF541-201ENST00000263351 KIF28PB7ZC32 967 aa19.36■□□□□ 0.69
ZNF541-201ENST00000263351 TATP17735 454 aaPredicted RBP19.36■□□□□ 0.69
ZNF541-201ENST00000263351 STX1AQ16623 288 aa19.36■□□□□ 0.69
ZNF541-201ENST00000263351 SYNE4Q8N205 404 aa19.36■□□□□ 0.69
ZNF541-201ENST00000263351 CCDC112Q8NEF3 446 aa19.36■□□□□ 0.69
ZNF541-201ENST00000263351 ZSCAN16Q9H4T2 348 aaPredicted RBP19.36■□□□□ 0.69
ZNF541-201ENST00000263351 CARMIL3Q8ND23 1372 aa19.35■□□□□ 0.69
ZNF541-201ENST00000263351 A0A1B0GUL7 405 aa19.35■□□□□ 0.69
ZNF541-201ENST00000263351 SMTNL1A8MU46 457 aa19.35■□□□□ 0.69
ZNF541-201ENST00000263351 IFIT1P09914 478 aaKnown RBP19.35■□□□□ 0.69
ZNF541-201ENST00000263351 SALL1Q9NSC2 1324 aa19.34■□□□□ 0.69
ZNF541-201ENST00000263351 ZMYM1Q5SVZ6 1142 aa19.34■□□□□ 0.69
ZNF541-201ENST00000263351 SDF4Q9BRK5 362 aa19.34■□□□□ 0.69
ZNF541-201ENST00000263351 MARCKSP29966 332 aaPredicted RBP19.34■□□□□ 0.69
ZNF541-201ENST00000263351 ST7Q9NRC1 585 aa19.34■□□□□ 0.69
ZNF541-201ENST00000263351 CABP4P57796 275 aa19.33■□□□□ 0.69
ZNF541-201ENST00000263351 FAM160A1Q05DH4 1040 aa19.33■□□□□ 0.69
ZNF541-201ENST00000263351 WASHC4Q2M389 1173 aa19.33■□□□□ 0.69
ZNF541-201ENST00000263351 HSP90AA4PQ58FG1 418 aa19.33■□□□□ 0.69
ZNF541-201ENST00000263351 STK11IPQ8N1F8 1099 aa19.33■□□□□ 0.69
ZNF541-201ENST00000263351 NEDD4P46934 1319 aa19.33■□□□□ 0.68
ZNF541-201ENST00000263351 SH3TC1Q8TE82 1336 aa19.33■□□□□ 0.68
ZNF541-201ENST00000263351 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.33■□□□□ 0.68
ZNF541-201ENST00000263351 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
ZNF541-201ENST00000263351 FMR1NBQ8N0W7 255 aaPredicted RBP19.33■□□□□ 0.68
ZNF541-201ENST00000263351 SENP2Q9HC62 589 aa19.33■□□□□ 0.68
ZNF541-201ENST00000263351 INCENPQ9NQS7 918 aa19.33■□□□□ 0.68
ZNF541-201ENST00000263351 CTNNA3Q9UI47 895 aa19.33■□□□□ 0.68
ZNF541-201ENST00000263351 NAA16Q6N069 864 aaPredicted RBP19.32■□□□□ 0.68
ZNF541-201ENST00000263351 ELF2Q15723 593 aa19.32■□□□□ 0.68
ZNF541-201ENST00000263351 PUS7LQ9H0K6 701 aaKnown RBP19.32■□□□□ 0.68
ZNF541-201ENST00000263351 SLIT3O75094 1523 aa19.31■□□□□ 0.68
ZNF541-201ENST00000263351 SMC2O95347 1197 aa19.31■□□□□ 0.68
ZNF541-201ENST00000263351 ATP1A3P13637 1013 aa19.31■□□□□ 0.68
ZNF541-201ENST00000263351 XPO4Q9C0E2 1151 aaKnown RBP19.31■□□□□ 0.68
ZNF541-201ENST00000263351 IFNKQ9P0W0 207 aa19.31■□□□□ 0.68
ZNF541-201ENST00000263351 MYH15Q9Y2K3 1946 aa19.31■□□□□ 0.68
ZNF541-201ENST00000263351 MROH7-TTC4A0A0A0MT08 1334 aa19.31■□□□□ 0.68
ZNF541-201ENST00000263351 ARFGEF2Q9Y6D5 1785 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms