RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 SCAND2PQ9GZW5 306 aaPredicted RBP11.55□□□□□ -0.56
PKD1-201ENST00000262304 BICDL2A1A5D9 508 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 NEMFO60524 1076 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 CETN1Q12798 172 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 GBP1P32455 592 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.55□□□□□ -0.563e-6■■■■■ 58.9
PKD1-201ENST00000262304 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 PDIA4P13667 645 aaKnown RBP11.55□□□□□ -0.56
PKD1-201ENST00000262304 TRIM31Q9BZY9 425 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 PEX19P40855 299 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 SYKP43405 635 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 MX1P20591 662 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 SYT10Q6XYQ8 523 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 NAIPQ13075 1403 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 STARD3NLO95772 234 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 TTF1Q15361 905 aaPredicted RBP11.55□□□□□ -0.56
PKD1-201ENST00000262304 USP48Q86UV5 1035 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.56
PKD1-201ENST00000262304 GEN1Q17RS7 908 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 TMEM67Q5HYA8 995 aa11.55□□□□□ -0.56
PKD1-201ENST00000262304 CUL5Q93034 780 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 CEP128Q6ZU80 1094 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 CTCFLQ8NI51 663 aaPredicted RBP11.54□□□□□ -0.56
PKD1-201ENST00000262304 F6X3S4 739 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 CALML4Q96GE6 196 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 HMGB2P26583 209 aaKnown RBP11.54□□□□□ -0.56
PKD1-201ENST00000262304 SETDB1Q15047 1291 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 FBXO31Q5XUX0 539 aaPredicted RBP11.54□□□□□ -0.56
PKD1-201ENST00000262304 GBP5Q96PP8 586 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 A0A087WZG4 1122 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 GMNNO75496 209 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 UIMC1Q96RL1 719 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 GCKP35557 465 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 SH2D4BQ5SQS7 431 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 TSC1Q92574 1164 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 CATIPQ7Z7H3 387 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 LIMCH1Q9UPQ0 1083 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 FANCAO15360 1455 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 CCT6AP40227 531 aaKnown RBP11.54□□□□□ -0.56
PKD1-201ENST00000262304 PPP2R3AQ06190 1150 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 MCM10Q7L590 875 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 GDAP1L1Q96MZ0 367 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 CCT6BQ92526 530 aa11.54□□□□□ -0.56
PKD1-201ENST00000262304 MCM7P33993 719 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 PRIMPOLQ96LW4 560 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 XRCC6P12956 609 aaKnown RBP eCLIP11.53□□□□□ -0.56
PKD1-201ENST00000262304 STAT6P42226 847 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 PPP1R21Q6ZMI0 780 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 AFAP1L1Q8TED9 768 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
PKD1-201ENST00000262304 MYH11P35749 1972 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 LRCH2Q5VUJ6 765 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 KIF22Q14807 665 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 INPP5BP32019 993 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 TTC21AQ8NDW8 1320 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 OPHN1O60890 802 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
PKD1-201ENST00000262304 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
PKD1-201ENST00000262304 AMOTL2Q9Y2J4 779 aa11.53□□□□□ -0.56
PKD1-201ENST00000262304 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
PKD1-201ENST00000262304 DENND4BO75064 1496 aaPredicted RBP11.53□□□□□ -0.56
PKD1-201ENST00000262304 URB2Q14146 1524 aaKnown RBP11.52□□□□□ -0.56
PKD1-201ENST00000262304 UTP14CQ5TAP6 766 aaKnown RBP11.52□□□□□ -0.56
PKD1-201ENST00000262304 MYD88Q99836 296 aa11.52□□□□□ -0.56
PKD1-201ENST00000262304 BAG1Q99933 345 aaPredicted RBP11.52□□□□□ -0.56
PKD1-201ENST00000262304 ADAMTS2O95450 1211 aa11.52□□□□□ -0.56
PKD1-201ENST00000262304 LMNTD2Q8IXW0 634 aa11.52□□□□□ -0.56
PKD1-201ENST00000262304 TRIM6Q9C030 488 aaPredicted RBP11.52□□□□□ -0.56
PKD1-201ENST00000262304 ORC3Q9UBD5 711 aaPredicted RBP11.52□□□□□ -0.56
PKD1-201ENST00000262304 CTAGE5O15320 804 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 DTNBO60941 627 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 CEBPAP49715 358 aaPredicted RBP11.52□□□□□ -0.57
PKD1-201ENST00000262304 NFE2L2Q16236 605 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 MRPL46Q9H2W6 279 aaKnown RBP11.52□□□□□ -0.57
PKD1-201ENST00000262304 IFNKQ9P0W0 207 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 SETSIPP0DME0 302 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 TBC1D9Q6ZT07 1266 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 ABCC5O15440 1437 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 IGHMBP2P38935 993 aaKnown RBP11.52□□□□□ -0.57
PKD1-201ENST00000262304 VPS52Q8N1B4 723 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.57
PKD1-201ENST00000262304 UBA7P41226 1012 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 PHAXQ9H814 394 aaKnown RBP11.52□□□□□ -0.57
PKD1-201ENST00000262304 EHMT1Q9H9B1 1298 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 SH2B1Q9NRF2 756 aaPredicted RBP11.52□□□□□ -0.57
PKD1-201ENST00000262304 COG7P83436 770 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 NKIRAS1Q9NYS0 192 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 BAG2O95816 211 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 RUFY3Q7L099 469 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 RAB34Q9BZG1 259 aa11.52□□□□□ -0.57
PKD1-201ENST00000262304 LUC7L2Q9Y383 392 aaKnown RBP11.51□□□□□ -0.57
PKD1-201ENST00000262304 TMPOP42166 694 aaKnown RBP11.51□□□□□ -0.57
PKD1-201ENST00000262304 ZPR1O75312 459 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 HAUS7Q99871 368 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 UBXN1Q04323 297 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 PSMB7Q99436 277 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 PHF8Q9UPP1 1060 aa11.51□□□□□ -0.57
PKD1-201ENST00000262304 ASIC1P78348 528 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms