RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 SRP68Q9UHB9 627 aaKnown RBP28.69■■■□□ 2.18
TSPAN13-201ENST00000262067 BRD1O95696 1058 aa28.68■■■□□ 2.18
TSPAN13-201ENST00000262067 IGHMBP2P38935 993 aaKnown RBP28.68■■■□□ 2.18
TSPAN13-201ENST00000262067 ZFYP08048 801 aaPredicted RBP28.68■■■□□ 2.18
TSPAN13-201ENST00000262067 HSPD1P10809 573 aaKnown RBP28.68■■■□□ 2.18
TSPAN13-201ENST00000262067 TCEANC2Q96MN5 208 aa28.68■■■□□ 2.18
TSPAN13-201ENST00000262067 LAMB2P55268 1798 aa28.67■■■□□ 2.18
TSPAN13-201ENST00000262067 GOLGA6L22H0YM25 854 aa28.67■■■□□ 2.18
TSPAN13-201ENST00000262067 SNAP23O00161 211 aa28.67■■■□□ 2.18
TSPAN13-201ENST00000262067 PTMSP20962 102 aa28.67■■■□□ 2.18
TSPAN13-201ENST00000262067 FOXD4L5Q5VV16 416 aaPredicted RBP28.67■■■□□ 2.18
TSPAN13-201ENST00000262067 C3orf67Q6ZVT6 689 aa28.67■■■□□ 2.18
TSPAN13-201ENST00000262067 FOXD4L4Q8WXT5 416 aaPredicted RBP28.67■■■□□ 2.18
TSPAN13-201ENST00000262067 ALDH8A1Q9H2A2 487 aaPredicted RBP28.66■■■□□ 2.18
TSPAN13-201ENST00000262067 SH2B1Q9NRF2 756 aaPredicted RBP28.66■■■□□ 2.18
TSPAN13-201ENST00000262067 TPCN1Q9ULQ1 816 aa28.66■■■□□ 2.18
TSPAN13-201ENST00000262067 ARID4AP29374 1257 aaPredicted RBP28.66■■■□□ 2.18
TSPAN13-201ENST00000262067 ME3Q16798 604 aa28.66■■■□□ 2.18
TSPAN13-201ENST00000262067 WASHC4Q2M389 1173 aa28.66■■■□□ 2.18
TSPAN13-201ENST00000262067 AMIGO3Q86WK7 504 aa28.66■■■□□ 2.18
TSPAN13-201ENST00000262067 GZF1Q9H116 711 aaPredicted RBP28.66■■■□□ 2.18
TSPAN13-201ENST00000262067 SLC5A1P13866 664 aa28.65■■■□□ 2.18
TSPAN13-201ENST00000262067 MCTP1Q6DN14 999 aa28.65■■■□□ 2.18
TSPAN13-201ENST00000262067 NEK1Q96PY6 1258 aa28.65■■■□□ 2.18
TSPAN13-201ENST00000262067 RTCBQ9Y3I0 505 aaKnown RBP28.65■■■□□ 2.18
TSPAN13-201ENST00000262067 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.65■■■□□ 2.18
TSPAN13-201ENST00000262067 UQCRFS1P1P0C7P4 283 aa28.65■■■□□ 2.18
TSPAN13-201ENST00000262067 CCDC83Q8IWF9 413 aa28.65■■■□□ 2.18
TSPAN13-201ENST00000262067 SCN7AQ01118 1682 aa28.64■■■□□ 2.18
TSPAN13-201ENST00000262067 ZPR1O75312 459 aa28.64■■■□□ 2.18
TSPAN13-201ENST00000262067 QTRT2Q9H974 415 aaKnown RBP28.64■■■□□ 2.18
TSPAN13-201ENST00000262067 AKAP11Q9UKA4 1901 aa28.64■■■□□ 2.18
TSPAN13-201ENST00000262067 SF3B3Q15393 1217 aaKnown RBP28.63■■■□□ 2.17
TSPAN13-201ENST00000262067 APPBP2Q92624 585 aa28.63■■■□□ 2.17
TSPAN13-201ENST00000262067 ST3GAL1Q11201 340 aa28.63■■■□□ 2.17
TSPAN13-201ENST00000262067 TOB2Q14106 344 aaPredicted RBP28.63■■■□□ 2.17
TSPAN13-201ENST00000262067 ANKRD1Q15327 319 aa28.63■■■□□ 2.17
TSPAN13-201ENST00000262067 PIH1D3Q9NQM4 214 aaKnown RBP28.63■■■□□ 2.17
TSPAN13-201ENST00000262067 SKOR2Q2VWA4 1001 aaPredicted RBP28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 STOX1Q6ZVD7 989 aa28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 ARHGEF1Q92888 912 aaKnown RBP28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 CDC5LQ99459 802 aaKnown RBP28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 PUS7LQ9H0K6 701 aaKnown RBP28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 GTF2E1P29083 439 aaPredicted RBP28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 CHRNDQ07001 517 aa28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 TTF1Q15361 905 aaPredicted RBP28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 SLC10A5Q5PT55 438 aa28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 CHAMP1Q96JM3 812 aa28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 SETDB2Q96T68 719 aa28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 SMC3Q9UQE7 1217 aa28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 COL4A1P02462 1669 aa28.62■■■□□ 2.17
TSPAN13-201ENST00000262067 SBF2Q86WG5 1849 aa28.61■■■□□ 2.17
TSPAN13-201ENST00000262067 A0A0G2JLW4 131 aa28.61■■■□□ 2.17
TSPAN13-201ENST00000262067 NECAB1Q8N987 351 aa28.61■■■□□ 2.17
TSPAN13-201ENST00000262067 LY75O60449 1722 aa28.6■■■□□ 2.17
TSPAN13-201ENST00000262067 BCL11BQ9C0K0 894 aaPredicted RBP28.6■■■□□ 2.17
TSPAN13-201ENST00000262067 ARAP2Q8WZ64 1704 aa28.59■■■□□ 2.17
TSPAN13-201ENST00000262067 FOXP2O15409 715 aa28.59■■■□□ 2.17
TSPAN13-201ENST00000262067 ADD2P35612 726 aa28.59■■■□□ 2.17
TSPAN13-201ENST00000262067 NYXQ9GZU5 481 aa28.59■■■□□ 2.17
TSPAN13-201ENST00000262067 SLC9C2Q5TAH2 1124 aa28.58■■■□□ 2.17
TSPAN13-201ENST00000262067 ZSCAN25Q6NSZ9 544 aa28.58■■■□□ 2.17
TSPAN13-201ENST00000262067 ANKRD18AQ8IVF6 992 aa28.58■■■□□ 2.17
TSPAN13-201ENST00000262067 TTLL5Q6EMB2 1281 aa28.58■■■□□ 2.17
TSPAN13-201ENST00000262067 SPATA5Q8NB90 893 aa28.58■■■□□ 2.17
TSPAN13-201ENST00000262067 LMBRD1Q9NUN5 540 aa28.58■■■□□ 2.17
TSPAN13-201ENST00000262067 WDR33Q9C0J8 1336 aaKnown RBP28.58■■■□□ 2.17
TSPAN13-201ENST00000262067 DTNBO60941 627 aa28.57■■■□□ 2.16
TSPAN13-201ENST00000262067 IDH1O75874 414 aaKnown RBP28.57■■■□□ 2.16
TSPAN13-201ENST00000262067 NBPF5PQ86XG9 351 aaPredicted RBP28.57■■■□□ 2.16
TSPAN13-201ENST00000262067 RASGRF1Q13972 1273 aa28.57■■■□□ 2.16
TSPAN13-201ENST00000262067 LRRC4BQ9NT99 713 aa28.57■■■□□ 2.16
TSPAN13-201ENST00000262067 TAF1LQ8IZX4 1826 aa28.56■■■□□ 2.16
TSPAN13-201ENST00000262067 GJB2P29033 226 aa28.56■■■□□ 2.16
TSPAN13-201ENST00000262067 BCAMP50895 628 aa28.56■■■□□ 2.16
TSPAN13-201ENST00000262067 GPAA1O43292 621 aa28.55■■■□□ 2.16
TSPAN13-201ENST00000262067 PHF14O94880 888 aa28.55■■■□□ 2.16
TSPAN13-201ENST00000262067 FAM196AQ6ZSG2 479 aa28.55■■■□□ 2.16
TSPAN13-201ENST00000262067 Q6ZUG5 572 aa28.55■■■□□ 2.16
TSPAN13-201ENST00000262067 E7EWF7 191 aa28.55■■■□□ 2.16
TSPAN13-201ENST00000262067 SYT1P21579 422 aa28.55■■■□□ 2.16
TSPAN13-201ENST00000262067 TRAPPC3LQ5T215 181 aa28.55■■■□□ 2.16
TSPAN13-201ENST00000262067 HMGB1P09429 215 aaKnown RBP28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 UBE3CQ15386 1083 aa28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 BSDC1Q9NW68 430 aaPredicted RBP28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 WWC3Q9ULE0 1092 aa28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 C4BP0C0L5 1744 aa28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 PRPF40AO75400 957 aaKnown RBP28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 PDE6AP16499 860 aa28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 RFC4P35249 363 aa28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 CCDC24Q8N4L8 307 aa28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 CTNNA3Q9UI47 895 aa28.54■■■□□ 2.16
TSPAN13-201ENST00000262067 STX6O43752 255 aa28.53■■■□□ 2.16
TSPAN13-201ENST00000262067 FGAP02671 866 aa28.53■■■□□ 2.16
TSPAN13-201ENST00000262067 TPTE2Q6XPS3 522 aa28.53■■■□□ 2.16
TSPAN13-201ENST00000262067 DHX32Q7L7V1 743 aaKnown RBP28.53■■■□□ 2.16
TSPAN13-201ENST00000262067 CELF1Q92879 486 aaKnown RBP28.53■■■□□ 2.16
TSPAN13-201ENST00000262067 DDX49Q9Y6V7 483 aaKnown RBP28.53■■■□□ 2.16
TSPAN13-201ENST00000262067 MYH7P12883 1935 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms