RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 ELP3Q9H9T3 547 aa3.61□□□□□ -1.83
ATF1-201ENST00000262053 POLR3DP05423 398 aaPredicted RBP3.61□□□□□ -1.83
ATF1-201ENST00000262053 JAG1P78504 1218 aa3.61□□□□□ -1.83
ATF1-201ENST00000262053 PLAURQ03405 335 aa3.61□□□□□ -1.83
ATF1-201ENST00000262053 ADAMTSL4Q6UY14 1074 aa3.61□□□□□ -1.83
ATF1-201ENST00000262053 DHX32Q7L7V1 743 aaKnown RBP3.61□□□□□ -1.83
ATF1-201ENST00000262053 RBCK1Q9BYM8 510 aa3.61□□□□□ -1.83
ATF1-201ENST00000262053 UBE2OQ9C0C9 1292 aaKnown RBP3.61□□□□□ -1.83
ATF1-201ENST00000262053 NIF3L1Q9GZT8 377 aa3.61□□□□□ -1.83
ATF1-201ENST00000262053 EREGO14944 169 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 NDUFB5O43674 189 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 TNFRSF21O75509 655 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 CPB1P15086 417 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 TAGLNQ01995 201 aaKnown RBP3.6□□□□□ -1.83
ATF1-201ENST00000262053 ALKBH2Q6NS38 261 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 ZSCAN29Q8IWY8 852 aaPredicted RBP3.6□□□□□ -1.83
ATF1-201ENST00000262053 TP53INP1Q96A56 240 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 MRRFQ96E11 262 aaKnown RBP3.6□□□□□ -1.83
ATF1-201ENST00000262053 CITED4Q96RK1 184 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 LATS2Q9NRM7 1088 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 RNF19AQ9NV58 838 aa3.6□□□□□ -1.83
ATF1-201ENST00000262053 DNAJB12Q9NXW2 375 aaKnown RBP3.6□□□□□ -1.83
ATF1-201ENST00000262053 ABI2Q9NYB9 513 aaPredicted RBP3.6□□□□□ -1.83
ATF1-201ENST00000262053 EGFRP00533 1210 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 ADH7P40394 386 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 RAC1P63000 192 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 MBTPS1Q14703 1052 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 ZNF326Q5BKZ1 582 aaKnown RBP3.59□□□□□ -1.83
ATF1-201ENST00000262053 PI16Q6UXB8 463 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 NLRP13Q86W25 1043 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 GIPC2Q8TF65 315 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 NUDT8Q8WV74 236 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 LENG1Q96BZ8 264 aaPredicted RBP3.59□□□□□ -1.83
ATF1-201ENST00000262053 CHRDQ9H2X0 955 aa3.59□□□□□ -1.83
ATF1-201ENST00000262053 FAM35AQ86V20 835 aa3.59□□□□□ -1.84
ATF1-201ENST00000262053 HHIPQ96QV1 700 aa3.59□□□□□ -1.84
ATF1-201ENST00000262053 FAM129BQ96TA1 746 aa3.59□□□□□ -1.84
ATF1-201ENST00000262053 WWC3Q9ULE0 1092 aa3.59□□□□□ -1.84
ATF1-201ENST00000262053 ALBP02768 609 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 MAPK8P45983 427 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 ATP11AP98196 1134 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 PDE12Q6L8Q7 609 aaKnown RBP3.58□□□□□ -1.84
ATF1-201ENST00000262053 TTC16Q8NEE8 873 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 MDFIQ99750 246 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 SLC6A14Q9UN76 642 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 TREHO43280 583 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 SIN3BO75182 1162 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 PCSK2P16519 638 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 EIF2AK2P19525 551 aaKnown RBP3.58□□□□□ -1.84
ATF1-201ENST00000262053 PERM1Q5SV97 790 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 FAM13BQ9NYF5 915 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 TLR7Q9NYK1 1049 aaKnown RBP3.58□□□□□ -1.84
ATF1-201ENST00000262053 FNDC3AQ9Y2H6 1198 aaKnown RBP3.58□□□□□ -1.84
ATF1-201ENST00000262053 STARD13Q9Y3M8 1113 aa3.58□□□□□ -1.84
ATF1-201ENST00000262053 ADARB2-AS1A8MUL3 147 aa3.57□□□□□ -1.84
ATF1-201ENST00000262053 P4HBP07237 508 aaKnown RBP3.57□□□□□ -1.84
ATF1-201ENST00000262053 CES1P23141 567 aa3.57□□□□□ -1.84
ATF1-201ENST00000262053 FGD1P98174 961 aa3.57□□□□□ -1.84
ATF1-201ENST00000262053 FMR1Q06787 632 aaKnown RBP eCLIP3.57□□□□□ -1.841e-6■■■■■ 42.9
ATF1-201ENST00000262053 EHHADHQ08426 723 aa3.57□□□□□ -1.84
ATF1-201ENST00000262053 TTC39BQ5VTQ0 682 aaPredicted RBP3.57□□□□□ -1.84
ATF1-201ENST00000262053 PSAPL1Q6NUJ1 521 aa3.57□□□□□ -1.84
ATF1-201ENST00000262053 OR13H1Q8NG92 308 aa3.57□□□□□ -1.84
ATF1-201ENST00000262053 TNFRSF25Q93038 417 aa3.57□□□□□ -1.84
ATF1-201ENST00000262053 ALKBH8Q96BT7 664 aaKnown RBP3.57□□□□□ -1.84
ATF1-201ENST00000262053 NPHS2Q9NP85 383 aa3.57□□□□□ -1.84
ATF1-201ENST00000262053 METTL12A8MUP2 240 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 M0R082 166 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 EIF1AYO14602 144 aaKnown RBP3.56□□□□□ -1.84
ATF1-201ENST00000262053 GSC2O15499 205 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 PHACTR2O75167 634 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 PSAPP07602 524 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 CDC25BP30305 580 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 USP5P45974 858 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 NEUROD1Q13562 356 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 DSC3Q14574 896 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 PEAR1Q5VY43 1037 aaPredicted RBP3.56□□□□□ -1.84
ATF1-201ENST00000262053 NCAPG2Q86XI2 1143 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 ZNF417Q8TAU3 575 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 TRPM4Q8TD43 1214 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 EPS8L3Q8TE67 593 aaKnown RBP3.56□□□□□ -1.84
ATF1-201ENST00000262053 DMRTB1Q96MA1 342 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 ZNF587Q96SQ5 575 aaPredicted RBP3.56□□□□□ -1.84
ATF1-201ENST00000262053 LPIN3Q9BQK8 851 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 PNMA6FA0A0J9YX94 578 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 TCF3P15923 654 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 EAPPQ56P03 285 aaPredicted RBP3.56□□□□□ -1.84
ATF1-201ENST00000262053 GDF6Q6KF10 455 aaPredicted RBP3.56□□□□□ -1.84
ATF1-201ENST00000262053 XKR5Q6UX68 686 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 SNX29Q8TEQ0 813 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 FAM161BQ96MY7 647 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 LACRTQ9GZZ8 138 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 SMG9Q9H0W8 520 aaKnown RBP3.56□□□□□ -1.84
ATF1-201ENST00000262053 BCL11AQ9H165 835 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 RASSF4Q9H2L5 321 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 JPH1Q9HDC5 661 aaPredicted RBP3.56□□□□□ -1.84
ATF1-201ENST00000262053 TRIM33Q9UPN9 1127 aa3.56□□□□□ -1.84
ATF1-201ENST00000262053 LOC102724428A0A0B4J2F2 783 aa3.55□□□□□ -1.84
ATF1-201ENST00000262053 MAP3K6O95382 1288 aa3.55□□□□□ -1.84
ATF1-201ENST00000262053 GP2P55259 537 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms