RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 NKIRAS1Q9NYS0 192 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 WDHD1O75717 1129 aaPredicted RBP8.1□□□□□ -1.11
HERC2-201ENST00000261609 LUC7L3O95232 432 aaKnown RBP8.1□□□□□ -1.11
HERC2-201ENST00000261609 CCDC82Q8N4S0 544 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 TRIM47Q96LD4 638 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 RASEFQ8IZ41 740 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 RPUSD2Q8IZ73 545 aaKnown RBP8.1□□□□□ -1.11
HERC2-201ENST00000261609 MCTP2Q6DN12 878 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 GBP7Q8N8V2 638 aaPredicted RBP8.1□□□□□ -1.11
HERC2-201ENST00000261609 ACTN2P35609 894 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 ICE2Q659A1 982 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 STRN4Q9NRL3 753 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 NAIPQ13075 1403 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 DZIP1Q86YF9 867 aaKnown RBP8.1□□□□□ -1.11
HERC2-201ENST00000261609 DAPK1P53355 1430 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 STXBP4Q6ZWJ1 553 aa8.1□□□□□ -1.11
HERC2-201ENST00000261609 ERCC6LQ2NKX8 1250 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 RRP15Q9Y3B9 282 aaKnown RBP8.09□□□□□ -1.11
HERC2-201ENST00000261609 RANBP6O60518 1105 aaKnown RBP8.09□□□□□ -1.11
HERC2-201ENST00000261609 SF3A3Q12874 501 aaKnown RBP eCLIP8.09□□□□□ -1.112e-11■■□□□ 14.1
HERC2-201ENST00000261609 TSPYL2Q9H2G4 693 aaPredicted RBP8.09□□□□□ -1.11
HERC2-201ENST00000261609 CCDC26Q8TAB7 109 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 IMPACTQ9P2X3 320 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 CASQ2O14958 399 aaPredicted RBP8.09□□□□□ -1.11
HERC2-201ENST00000261609 KRT86O43790 486 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 NCOA7Q8NI08 942 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 UBA7P41226 1012 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 CUL5Q93034 780 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 FAM114A2Q9NRY5 505 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 FERMT1Q9BQL6 677 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 ESYT1Q9BSJ8 1104 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 PRC1O43663 620 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 METAP2P50579 478 aaKnown RBP eCLIP8.09□□□□□ -1.113e-6■■□□□ 14.5
HERC2-201ENST00000261609 RNASE9P60153 205 aaKnown RBP8.09□□□□□ -1.11
HERC2-201ENST00000261609 IQCA1Q86XH1 822 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 PDE11AQ9HCR9 933 aa8.09□□□□□ -1.11
HERC2-201ENST00000261609 CETN3O15182 167 aa8.09□□□□□ -1.12
HERC2-201ENST00000261609 NEDD9Q14511 834 aa8.09□□□□□ -1.12
HERC2-201ENST00000261609 MRFAP1L1Q96HT8 127 aa8.09□□□□□ -1.12
HERC2-201ENST00000261609 AFMP43652 599 aa8.09□□□□□ -1.12
HERC2-201ENST00000261609 CCT5P48643 541 aa8.09□□□□□ -1.12
HERC2-201ENST00000261609 INTS8Q75QN2 995 aaKnown RBP8.09□□□□□ -1.12
HERC2-201ENST00000261609 GAS2L3Q86XJ1 694 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 TBC1D31Q96DN5 1066 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 CCDC170Q8IYT3 715 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 GNGT1P63211 74 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 GSDMBQ8TAX9 411 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 SLC26A6Q9BXS9 759 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 TTC21AQ8NDW8 1320 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 IARSP41252 1262 aaKnown RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 ZNF131P52739 623 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 RASIP1Q5U651 963 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 ARHGAP45Q92619 1136 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 STK38LQ9Y2H1 464 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 CCDC141Q6ZP82 1450 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 TTF1Q15361 905 aaPredicted RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 TMEM67Q5HYA8 995 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 SPTY2D1Q68D10 685 aaPredicted RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 ARHGEF2Q92974 986 aaKnown RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 JAKMIP2Q96AA8 810 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 RTL1A6NKG5 1358 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 PSMA7O14818 248 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 RAB3IPQ96QF0 476 aaPredicted RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 USH1CQ9Y6N9 552 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 E7EVH7 732 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 IFIT1P09914 478 aaKnown RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 RUFY4Q6ZNE9 571 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 CLTAP09496 248 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 LRRC23Q53EV4 343 aaPredicted RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 PHLDB2Q86SQ0 1253 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 LRRC45Q96CN5 670 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 CABS1Q96KC9 395 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 VCX3BQ9H321 246 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 TSNARE1Q96NA8 513 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 TACO1Q9BSH4 297 aaKnown RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 LRRD1A4D1F6 860 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 CCDC122Q5T0U0 273 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 C16orf71Q8IYS4 520 aaPredicted RBP8.08□□□□□ -1.12
HERC2-201ENST00000261609 OPHN1O60890 802 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 IFT88Q13099 833 aa8.08□□□□□ -1.12
HERC2-201ENST00000261609 PTPN23Q9H3S7 1636 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 IGSF22Q8N9C0 903 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 CCDC8Q9H0W5 538 aaPredicted RBP8.07□□□□□ -1.12
HERC2-201ENST00000261609 CNGA4Q8IV77 575 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 A0A087WUV0 522 aaPredicted RBP8.07□□□□□ -1.12
HERC2-201ENST00000261609 ESCO1Q5FWF5 840 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 SPATS2Q86XZ4 545 aaKnown RBP8.07□□□□□ -1.12
HERC2-201ENST00000261609 CAPS2Q9BXY5 557 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 IQCGQ9H095 443 aaKnown RBP8.07□□□□□ -1.12
HERC2-201ENST00000261609 PPP4R3AQ6IN85 833 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 SLC5A1P13866 664 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 MFSD6Q6ZSS7 791 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 KIAA1524Q8TCG1 905 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 SLC52A1Q9NWF4 448 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 RAD54L2Q9Y4B4 1467 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 NSD2O96028 1365 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 GKAP1Q5VSY0 366 aaPredicted RBP8.07□□□□□ -1.12
HERC2-201ENST00000261609 MINDY4BA8MYZ0 360 aa8.07□□□□□ -1.12
HERC2-201ENST00000261609 PPP1R42Q7Z4L9 355 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms