RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CNNM2Q9H8M5 875 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL8A1-201ENST00000261037 NBPF7P0C2Y1 421 aaPredicted RBP13.79□□□□□ -0.2
COL8A1-201ENST00000261037 KIAA0753Q2KHM9 967 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 ZNF804AQ7Z570 1209 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 SIRT1Q96EB6 747 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 SPAG5Q96R06 1193 aa13.79□□□□□ -0.2
COL8A1-201ENST00000261037 MRPS27Q92552 414 aaKnown RBP13.78□□□□□ -0.2
COL8A1-201ENST00000261037 TFCP2Q12800 502 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 EIF4A2Q14240 407 aaKnown RBP13.78□□□□□ -0.2
COL8A1-201ENST00000261037 MTHFSDQ2M296 383 aaKnown RBP13.78□□□□□ -0.2
COL8A1-201ENST00000261037 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
COL8A1-201ENST00000261037 MPHOSPH6Q99547 160 aaKnown RBP13.78□□□□□ -0.2
COL8A1-201ENST00000261037 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 DZIP3Q86Y13 1208 aaKnown RBP13.78□□□□□ -0.2
COL8A1-201ENST00000261037 PLCD3Q8N3E9 789 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 PPP1R14CQ8TAE6 165 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 A0A1W2PRG0 241 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 GOLGA6L9A6NEM1 432 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 KRT13P13646 458 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 MCM7P33993 719 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 ATP8B2P98198 1209 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 HDAC1Q13547 482 aaPredicted RBP13.78□□□□□ -0.2
COL8A1-201ENST00000261037 CEP112Q8N8E3 955 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 TSNARE1Q96NA8 513 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 HDAC9Q9UKV0 1011 aa13.78□□□□□ -0.2
COL8A1-201ENST00000261037 KRT24Q2M2I5 525 aa13.77□□□□□ -0.2
COL8A1-201ENST00000261037 UVSSAQ2YD98 709 aa13.77□□□□□ -0.2
COL8A1-201ENST00000261037 DACT1Q9NYF0 836 aa13.77□□□□□ -0.2
COL8A1-201ENST00000261037 IKBKGQ9Y6K9 419 aa13.77□□□□□ -0.2
COL8A1-201ENST00000261037 MSH6P52701 1360 aa13.77□□□□□ -0.2
COL8A1-201ENST00000261037 KSR2Q6VAB6 950 aa13.77□□□□□ -0.2
COL8A1-201ENST00000261037 TRAPPC8Q9Y2L5 1435 aa13.77□□□□□ -0.2
COL8A1-201ENST00000261037 F13A1P00488 732 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 ZFYP08048 801 aaPredicted RBP13.77□□□□□ -0.21
COL8A1-201ENST00000261037 AKAP4Q5JQC9 854 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 KCNG4Q8TDN1 519 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 NLRP3Q96P20 1036 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 ACTN2P35609 894 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 STX17P56962 302 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.21
COL8A1-201ENST00000261037 ZGPATQ8N5A5 531 aaKnown RBP13.77□□□□□ -0.21
COL8A1-201ENST00000261037 NFATC2IPQ8NCF5 419 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 DNAI1Q9UI46 699 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 NUP160Q12769 1436 aa13.77□□□□□ -0.21
COL8A1-201ENST00000261037 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 CAPZA3Q96KX2 299 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 ABCC10Q5T3U5 1492 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 SKILP12757 684 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 TNNI2P48788 182 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 CCDC186Q7Z3E2 898 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 KRT2P35908 639 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 GIGYF2Q6Y7W6 1299 aaKnown RBP13.76□□□□□ -0.21
COL8A1-201ENST00000261037 PABPN1LA6NDY0 278 aaKnown RBP13.76□□□□□ -0.21
COL8A1-201ENST00000261037 IL15P40933 162 aaPredicted RBP13.76□□□□□ -0.21
COL8A1-201ENST00000261037 ANKRD44Q8N8A2 993 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 MCM9Q9NXL9 1143 aa13.76□□□□□ -0.21
COL8A1-201ENST00000261037 EEF2P13639 858 aaKnown RBP13.75□□□□□ -0.21
COL8A1-201ENST00000261037 SP4Q02446 784 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
COL8A1-201ENST00000261037 CTAGE1Q96RT6 745 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 SAP30BPQ9UHR5 308 aaKnown RBP13.75□□□□□ -0.21
COL8A1-201ENST00000261037 CYLC1P35663 651 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-201ENST00000261037 OTUD6BQ8N6M0 293 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 EHBP1Q8NDI1 1231 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
COL8A1-201ENST00000261037 FERMT1Q9BQL6 677 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL8A1-201ENST00000261037 V9GYY5 206 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-201ENST00000261037 SYT1P21579 422 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 ARL1P40616 181 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-201ENST00000261037 CADPS2Q86UW7 1296 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 TSPYL6Q8N831 410 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 PKD2L1Q9P0L9 805 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 ABCC2Q92887 1545 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 CCDC172P0C7W6 258 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 AK2P54819 239 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 GSTA5Q7RTV2 222 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 CCDC50Q8IVM0 306 aa13.75□□□□□ -0.21
COL8A1-201ENST00000261037 FERP16591 822 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 MRPS9P82933 396 aaKnown RBP13.74□□□□□ -0.21
COL8A1-201ENST00000261037 CCDC171Q6TFL3 1326 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 TMTC2Q8N394 836 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 UHRF1BP1LA0JNW5 1464 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 IRS4O14654 1257 aaPredicted RBP13.74□□□□□ -0.21
COL8A1-201ENST00000261037 C6orf50Q9HD87 102 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 KARSQ15046 597 aaKnown RBP13.74□□□□□ -0.21
COL8A1-201ENST00000261037 RTL9Q8NET4 1388 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 FAM13AO94988 1023 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 LMOD1P29536 600 aaPredicted RBP13.74□□□□□ -0.21
COL8A1-201ENST00000261037 CKAP4Q07065 602 aaKnown RBP13.74□□□□□ -0.21
COL8A1-201ENST00000261037 DDB1Q16531 1140 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 OGFOD1Q8N543 542 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
COL8A1-201ENST00000261037 CTAGE15A4D2H0 777 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms