RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 ATP8B2P98198 1209 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 CCDC150Q8NCX0 1101 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 SPATA31A6Q5VVP1 1343 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 ZFYP08048 801 aaPredicted RBP7.37□□□□□ -1.23
BRIP1-201ENST00000259008 IARSP41252 1262 aaKnown RBP7.37□□□□□ -1.23
BRIP1-201ENST00000259008 WDR66Q8TBY9 1149 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 PRDM15P57071 1507 aaPredicted RBP7.37□□□□□ -1.23
BRIP1-201ENST00000259008 SPDYE3A6NKU9 549 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 RNF113AO15541 343 aaKnown RBP7.37□□□□□ -1.23
BRIP1-201ENST00000259008 CCDC178Q5BJE1 867 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 SYCP3Q8IZU3 236 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 RRP36Q96EU6 259 aaKnown RBP7.37□□□□□ -1.23
BRIP1-201ENST00000259008 CEP152O94986 1710 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 EIF4A1P60842 406 aaKnown RBP7.37□□□□□ -1.23
BRIP1-201ENST00000259008 MCMDC2Q4G0Z9 681 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 PIGBQ92521 554 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 MMRN2Q9H8L6 949 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 SORBS3O60504 671 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 TNFAIP1Q13829 316 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 TTLL6Q8N841 843 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 TEKT1Q969V4 418 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 NEK1Q96PY6 1258 aa7.37□□□□□ -1.23
BRIP1-201ENST00000259008 MYCLP12524 364 aaPredicted RBP7.36□□□□□ -1.23
BRIP1-201ENST00000259008 DESP17661 470 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 GYG1P46976 350 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 NMIQ13287 307 aaPredicted RBP7.36□□□□□ -1.23
BRIP1-201ENST00000259008 CCDC93Q567U6 631 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 DEF6Q9H4E7 631 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 CDC42BPAQ5VT25 1732 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 EYA2O00167 538 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 BACH1O14867 736 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 KCNQ2O43526 872 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 PPP1R12BO60237 982 aaPredicted RBP7.36□□□□□ -1.23
BRIP1-201ENST00000259008 SERPINC1P01008 464 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 GNAT2P19087 354 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 MCM5P33992 734 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 GCKRQ14397 625 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 OTUD7BQ6GQQ9 843 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 FAM212AQ96EL1 285 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 SUCLG2Q96I99 432 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 GOPCQ9HD26 462 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 TNS3Q68CZ2 1445 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 PRR36Q9H6K5 1346 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 KLF18A0A0U1RQI7 1052 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 ATP2B4P23634 1241 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 RNF214Q8ND24 703 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 CNNM2Q9H8M5 875 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 USP6P35125 1406 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 K7ELQ4 463 aaPredicted RBP7.36□□□□□ -1.23
BRIP1-201ENST00000259008 VAMP4O75379 141 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 KRT85P78386 507 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 USH1GQ495M9 461 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 GOLGA6L1Q8N7Z2 621 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 TNNQ9UQP3 1299 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 PTPRTO14522 1441 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 MROH5Q6ZUA9 1318 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 ANKARQ7Z5J8 1434 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 KDM4FA0A1W2PPD8 638 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 RXRAP19793 462 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 TXNRD1Q16881 649 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 SPOUT1Q5T280 376 aaKnown RBP7.36□□□□□ -1.23
BRIP1-201ENST00000259008 KIFC2Q96AC6 838 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 CALML4Q96GE6 196 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 GPR101Q96P66 508 aaPredicted RBP7.36□□□□□ -1.23
BRIP1-201ENST00000259008 PODXL2Q9NZ53 605 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 GINS2Q9Y248 185 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 NDUFB9Q9Y6M9 179 aa7.36□□□□□ -1.23
BRIP1-201ENST00000259008 PARP1P09874 1014 aaKnown RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 RFX1P22670 979 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 TCEANC2Q96MN5 208 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 MAP3K15Q6ZN16 1313 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 PRAMEF22A3QJZ6 481 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 ZBED4O75132 1171 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 RTN1Q16799 776 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 SMIM5Q71RC9 77 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 FCHSD1Q86WN1 690 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 SPATA5Q8NB90 893 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 TNMDQ9H2S6 317 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 DACH1Q9UI36 760 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 BRDTQ58F21 947 aaPredicted RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 FAM47CQ5HY64 1035 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 IL17REQ8NFR9 667 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 AS3MTQ9HBK9 375 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 INSRP06213 1382 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 SETD1BQ9UPS6 1966 aaKnown RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 EZH2Q15910 746 aaKnown RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 NOM1Q5C9Z4 860 aaKnown RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 ARMC9Q7Z3E5 817 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 TSG101Q99816 390 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 PANK2Q9BZ23 570 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 TAOK3Q9H2K8 898 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 ERBB3P21860 1342 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 FAM135BQ49AJ0 1406 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 ZBTB43O43298 467 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 CSPG5O95196 566 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 NCBP1Q09161 790 aaKnown RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 KLHL10Q6JEL2 608 aa7.35□□□□□ -1.23
BRIP1-201ENST00000259008 CAVIN1Q6NZI2 390 aaKnown RBP7.35□□□□□ -1.23
BRIP1-201ENST00000259008 LPIN2Q92539 896 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms