RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 SDF4Q9BRK5 362 aa16.22■□□□□ 0.19
LIMD2-201ENST00000259006 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
LIMD2-201ENST00000259006 PPP2R5AQ15172 486 aa16.22■□□□□ 0.19
LIMD2-201ENST00000259006 TM6SF1Q9BZW5 370 aa16.22■□□□□ 0.19
LIMD2-201ENST00000259006 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.22■□□□□ 0.19
LIMD2-201ENST00000259006 NPHP4O75161 1426 aaPredicted RBP16.22■□□□□ 0.19
LIMD2-201ENST00000259006 TTC21AQ8NDW8 1320 aa16.21■□□□□ 0.19
LIMD2-201ENST00000259006 MAP3K5Q99683 1374 aa16.21■□□□□ 0.19
LIMD2-201ENST00000259006 TECPR2O15040 1411 aa16.21■□□□□ 0.19
LIMD2-201ENST00000259006 DDX46Q7L014 1031 aaKnown RBP16.21■□□□□ 0.19
LIMD2-201ENST00000259006 SRLQ86TD4 932 aa16.21■□□□□ 0.19
LIMD2-201ENST00000259006 ARHGEF10O15013 1369 aa16.21■□□□□ 0.19
LIMD2-201ENST00000259006 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
LIMD2-201ENST00000259006 A0A1B0GVL5 298 aa16.21■□□□□ 0.19
LIMD2-201ENST00000259006 ATP2B1P20020 1258 aa16.21■□□□□ 0.19
LIMD2-201ENST00000259006 PLCD4Q9BRC7 762 aa16.21■□□□□ 0.19
LIMD2-201ENST00000259006 USP6P35125 1406 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 KINO60870 393 aaKnown RBP16.2■□□□□ 0.18
LIMD2-201ENST00000259006 HSP90AA4PQ58FG1 418 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 CCDC73Q6ZRK6 1079 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 SH3BP1Q9Y3L3 701 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 PLEKHG3A1L390 1219 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 MAP2K1Q02750 393 aaPredicted RBP16.2■□□□□ 0.18
LIMD2-201ENST00000259006 APOBRQ0VD83 1088 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 USP28Q96RU2 1077 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 GOLGA8FQ08AF8 430 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 GOLGA8DPQ0D2H9 430 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 CCDC91Q7Z6B0 441 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 FSIP1Q8NA03 581 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 NEK1Q96PY6 1258 aa16.2■□□□□ 0.18
LIMD2-201ENST00000259006 CWC15Q9P013 229 aaKnown RBP16.2■□□□□ 0.18
LIMD2-201ENST00000259006 ANKRD65E5RJM6 399 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 POLR3DP05423 398 aaPredicted RBP16.19■□□□□ 0.18
LIMD2-201ENST00000259006 IQCB1Q15051 598 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
LIMD2-201ENST00000259006 ZNF530Q6P9A1 599 aaPredicted RBP16.19■□□□□ 0.18
LIMD2-201ENST00000259006 TMC6Q7Z403 805 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 ZCCHC17Q9NP64 241 aaKnown RBP16.19■□□□□ 0.18
LIMD2-201ENST00000259006 PEAK1Q9H792 1746 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 OVOS2Q6IE36 1432 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 CALR3Q96L12 384 aaKnown RBP16.19■□□□□ 0.18
LIMD2-201ENST00000259006 EPC1Q9H2F5 836 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 FAM53CQ9NYF3 392 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 ZBTB12Q9Y330 459 aaPredicted RBP16.19■□□□□ 0.18
LIMD2-201ENST00000259006 ELP1O95163 1332 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
LIMD2-201ENST00000259006 SCRN1Q12765 414 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 NBPF6Q5VWK0 638 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 TTLL5Q6EMB2 1281 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 NBPF4Q96M43 638 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 ATG3Q9NT62 314 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
LIMD2-201ENST00000259006 ADAMTSL3P82987 1691 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 RESTQ13127 1097 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 GJB4Q9NTQ9 266 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 ADCY9O60503 1353 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 BIRC2Q13490 618 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 ANKRD1Q15327 319 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 STK11IPQ8N1F8 1099 aa16.18■□□□□ 0.18
LIMD2-201ENST00000259006 SLC39A6Q13433 755 aa16.17■□□□□ 0.18
LIMD2-201ENST00000259006 SF3A1Q15459 793 aaKnown RBP16.17■□□□□ 0.18
LIMD2-201ENST00000259006 STX1AQ16623 288 aa16.17■□□□□ 0.18
LIMD2-201ENST00000259006 RIC3Q7Z5B4 369 aa16.17■□□□□ 0.18
LIMD2-201ENST00000259006 NOM1Q5C9Z4 860 aaKnown RBP16.16■□□□□ 0.18
LIMD2-201ENST00000259006 LRCH2Q5VUJ6 765 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 TICAM2Q86XR7 235 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 CCAR2Q8N163 923 aaKnown RBP16.16■□□□□ 0.18
LIMD2-201ENST00000259006 IFNKQ9P0W0 207 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 CFAP45Q9UL16 551 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 TAF5LO75529 589 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 CCZ1BP86790 482 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 CCZ1P86791 482 aaPredicted RBP16.16■□□□□ 0.18
LIMD2-201ENST00000259006 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
LIMD2-201ENST00000259006 CEP120Q8N960 986 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 CYP21A2P08686 494 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 ATF3P18847 181 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 LMOD1P29536 600 aaPredicted RBP16.16■□□□□ 0.18
LIMD2-201ENST00000259006 PLA2G4AP47712 749 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 KAZALD1Q96I82 304 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
LIMD2-201ENST00000259006 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
LIMD2-201ENST00000259006 GPS2Q13227 327 aa16.15■□□□□ 0.18
LIMD2-201ENST00000259006 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
LIMD2-201ENST00000259006 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.15■□□□□ 0.18
LIMD2-201ENST00000259006 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
LIMD2-201ENST00000259006 GRM8O00222 908 aa16.15■□□□□ 0.18
LIMD2-201ENST00000259006 SLU7O95391 586 aaKnown RBP16.15■□□□□ 0.18
LIMD2-201ENST00000259006 MAP2K2P36507 400 aa16.15■□□□□ 0.18
LIMD2-201ENST00000259006 LMAN1P49257 510 aa16.15■□□□□ 0.18
LIMD2-201ENST00000259006 NBPF20Q3BBV1 942 aa16.15■□□□□ 0.18
LIMD2-201ENST00000259006 DHX40Q8IX18 779 aaKnown RBP16.15■□□□□ 0.18
LIMD2-201ENST00000259006 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 HTATSF1O43719 755 aaKnown RBP16.14■□□□□ 0.17
LIMD2-201ENST00000259006 PNMA6AP0CW24 399 aaPredicted RBP16.14■□□□□ 0.17
LIMD2-201ENST00000259006 DPCR1Q3MIW9 517 aa16.14■□□□□ 0.17
LIMD2-201ENST00000259006 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms