RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ZSCAN22P10073 491 aaPredicted RBP17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 STOX1Q6ZVD7 989 aa17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 ABCF2Q9UG63 623 aa17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 SIPA1L3O60292 1781 aaPredicted RBP17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 FAM184AQ8NB25 1140 aa17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 AFDNP55196 1824 aaKnown RBP17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 MAST3O60307 1309 aa17.33■□□□□ 0.37
TRAFD1-201ENST00000257604 H3BQV1 296 aa17.33■□□□□ 0.37
TRAFD1-201ENST00000257604 IFFO2Q5TF58 517 aa17.33■□□□□ 0.37
TRAFD1-201ENST00000257604 CDC37L1Q7L3B6 337 aa17.33■□□□□ 0.37
TRAFD1-201ENST00000257604 RXRAP19793 462 aa17.33■□□□□ 0.36
TRAFD1-201ENST00000257604 ST3GAL1Q11201 340 aa17.33■□□□□ 0.36
TRAFD1-201ENST00000257604 INCENPQ9NQS7 918 aa17.33■□□□□ 0.36
TRAFD1-201ENST00000257604 MCAMP43121 646 aa17.32■□□□□ 0.36
TRAFD1-201ENST00000257604 CCDC144CPQ8IYA2 1237 aa17.32■□□□□ 0.36
TRAFD1-201ENST00000257604 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
TRAFD1-201ENST00000257604 TOB2Q14106 344 aaPredicted RBP17.32■□□□□ 0.36
TRAFD1-201ENST00000257604 SLC4A8Q2Y0W8 1093 aa17.32■□□□□ 0.36
TRAFD1-201ENST00000257604 DENND2AQ9ULE3 1009 aa17.32■□□□□ 0.36
TRAFD1-201ENST00000257604 RRP12Q5JTH9 1297 aaKnown RBP17.32■□□□□ 0.36
TRAFD1-201ENST00000257604 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
TRAFD1-201ENST00000257604 BCL9O00512 1426 aa17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 PDE8AO60658 829 aa17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 UTP14AQ9BVJ6 771 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 F13A1P00488 732 aa17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 INTS5Q6P9B9 1019 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 MIGA1Q8NAN2 632 aa17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 NOL7Q9UMY1 257 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 SH3TC1Q8TE82 1336 aa17.31■□□□□ 0.36
TRAFD1-201ENST00000257604 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
TRAFD1-201ENST00000257604 BCAMP50895 628 aa17.3■□□□□ 0.36
TRAFD1-201ENST00000257604 CAMK4Q16566 473 aa17.3■□□□□ 0.36
TRAFD1-201ENST00000257604 MRC1P22897 1456 aa17.3■□□□□ 0.36
TRAFD1-201ENST00000257604 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
TRAFD1-201ENST00000257604 CCDC102BQ68D86 513 aa17.3■□□□□ 0.36
TRAFD1-201ENST00000257604 ZSCAN31Q96LW9 406 aaPredicted RBP17.3■□□□□ 0.36
TRAFD1-201ENST00000257604 PALLDQ8WX93 1383 aa17.29■□□□□ 0.36
TRAFD1-201ENST00000257604 OTUD7BQ6GQQ9 843 aa17.29■□□□□ 0.36
TRAFD1-201ENST00000257604 RPAP1Q9BWH6 1393 aaPredicted RBP17.29■□□□□ 0.36
TRAFD1-201ENST00000257604 MED23Q9ULK4 1368 aa17.29■□□□□ 0.36
TRAFD1-201ENST00000257604 GPAA1O43292 621 aa17.29■□□□□ 0.36
TRAFD1-201ENST00000257604 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
TRAFD1-201ENST00000257604 E7EWF7 191 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 CCDC82Q8N4S0 544 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 WWC3Q9ULE0 1092 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 MTMR6Q9Y217 621 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 PDE8BO95263 885 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 FGAP02671 866 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 ZMYM1Q5SVZ6 1142 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 FBXW7Q969H0 707 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 GNPATO15228 680 aa17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 EIF5P55010 431 aaKnown RBP17.28■□□□□ 0.36
TRAFD1-201ENST00000257604 IGHMBP2P38935 993 aaKnown RBP17.27■□□□□ 0.36
TRAFD1-201ENST00000257604 LRSAM1Q6UWE0 723 aa17.27■□□□□ 0.36
TRAFD1-201ENST00000257604 RALYLQ86SE5 291 aaKnown RBP17.27■□□□□ 0.36
TRAFD1-201ENST00000257604 USP21Q9UK80 565 aa17.27■□□□□ 0.36
TRAFD1-201ENST00000257604 ARFGEF2Q9Y6D5 1785 aa17.27■□□□□ 0.36
TRAFD1-201ENST00000257604 CSF1RP07333 972 aa17.27■□□□□ 0.35
TRAFD1-201ENST00000257604 ERFEQ4G0M1 354 aa17.27■□□□□ 0.35
TRAFD1-201ENST00000257604 MAGEB6Q8N7X4 407 aa17.27■□□□□ 0.35
TRAFD1-201ENST00000257604 TM6SF1Q9BZW5 370 aa17.27■□□□□ 0.35
TRAFD1-201ENST00000257604 HMG20BQ9P0W2 317 aa17.27■□□□□ 0.35
TRAFD1-201ENST00000257604 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.35
TRAFD1-201ENST00000257604 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 CIAO1O76071 339 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 KRT32Q14532 448 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 GIMAP6Q6P9H5 292 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 PDLIM2Q96JY6 352 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 GJB4Q9NTQ9 266 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 LRP2BPQ9P2M1 347 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 GYG1P46976 350 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 TRIM28Q13263 835 aaKnown RBP17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 ANKRD1Q15327 319 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 C3orf67Q6ZVT6 689 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 AIDAQ96BJ3 306 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 ZNF532Q9HCE3 1301 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 USPL1Q5W0Q7 1092 aa17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 FTOQ9C0B1 505 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRAFD1-201ENST00000257604 PKD1L3Q7Z443 1732 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 ZNF213O14771 459 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 SCRN1Q12765 414 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 IMMTQ16891 758 aaKnown RBP17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 LINC00116Q8NCU8 138 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 SPATA31A5Q5VU36 1347 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 SPATA31A7Q8IWB4 1347 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 PARP4Q9UKK3 1724 aaKnown RBP17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 ZKSCAN3Q9BRR0 538 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 MYL10Q9BUA6 226 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 ARMT1Q9H993 441 aa17.25■□□□□ 0.35
TRAFD1-201ENST00000257604 HELLSQ9NRZ9 838 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms