RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 GJB4Q9NTQ9 266 aa14.21□□□□□ -0.13
USP30-201ENST00000257548 NEO1Q92859 1461 aa14.21□□□□□ -0.13
USP30-201ENST00000257548 NDUFA8P51970 172 aa14.21□□□□□ -0.13
USP30-201ENST00000257548 RUFY1Q96T51 708 aa14.21□□□□□ -0.13
USP30-201ENST00000257548 MYO1CO00159 1063 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 WDHD1O75717 1129 aaPredicted RBP14.2□□□□□ -0.14
USP30-201ENST00000257548 IPO7O95373 1038 aaKnown RBP14.2□□□□□ -0.14
USP30-201ENST00000257548 CHGBP05060 677 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 DNA2P51530 1060 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 DHX8Q14562 1220 aaKnown RBP14.2□□□□□ -0.14
USP30-201ENST00000257548 TRMT44Q8IYL2 757 aaKnown RBP14.2□□□□□ -0.14
USP30-201ENST00000257548 SMARCC1Q92922 1105 aaPredicted RBP14.2□□□□□ -0.14
USP30-201ENST00000257548 PUS7Q96PZ0 661 aaKnown RBP14.2□□□□□ -0.14
USP30-201ENST00000257548 FAM135BQ49AJ0 1406 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 ZNF569Q5MCW4 686 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 GOLGA1Q92805 767 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 PDE11AQ9HCR9 933 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 MICU3Q86XE3 530 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 MYD88Q99836 296 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 BAG1Q99933 345 aaPredicted RBP14.2□□□□□ -0.14
USP30-201ENST00000257548 CFAP74Q9C0B2 1584 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 FAM107BQ9H098 131 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 ATP10DQ9P241 1426 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 KIAA1210Q9ULL0 1709 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 IFT172Q9UG01 1749 aa14.2□□□□□ -0.14
USP30-201ENST00000257548 KCNQ3O43525 872 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 DHX16O60231 1041 aaKnown RBP14.19□□□□□ -0.14
USP30-201ENST00000257548 MATR3P43243 847 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP30-201ENST00000257548 NAP1L1P55209 391 aaKnown RBP14.19□□□□□ -0.14
USP30-201ENST00000257548 COL9A3Q14050 684 aaPredicted RBP14.19□□□□□ -0.14
USP30-201ENST00000257548 SLFNL1Q499Z3 407 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 CRACR2AQ9BSW2 395 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 SETBP1Q9Y6X0 1596 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 KLF18A0A0U1RQI7 1052 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 ZNF202O95125 648 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
USP30-201ENST00000257548 JMYQ8N9B5 988 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 LRRFIP1Q32MZ4 808 aaKnown RBP14.19□□□□□ -0.14
USP30-201ENST00000257548 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 TTC41PQ6P2S7 1318 aa14.19□□□□□ -0.14
USP30-201ENST00000257548 SAFBQ15424 915 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP30-201ENST00000257548 ZNF827Q17R98 1081 aa14.18□□□□□ -0.14
USP30-201ENST00000257548 BICC1Q9H694 974 aaKnown RBP14.18□□□□□ -0.14
USP30-201ENST00000257548 PCDHA7Q9UN72 937 aa14.18□□□□□ -0.14
USP30-201ENST00000257548 U3KPZ7 1027 aaPredicted RBP14.18□□□□□ -0.14
USP30-201ENST00000257548 TTC21BQ7Z4L5 1316 aa14.18□□□□□ -0.14
USP30-201ENST00000257548 SYCP1Q15431 976 aa14.18□□□□□ -0.14
USP30-201ENST00000257548 E4F1Q66K89 784 aaPredicted RBP14.18□□□□□ -0.14
USP30-201ENST00000257548 AEBP2Q6ZN18 517 aaPredicted RBP14.18□□□□□ -0.14
USP30-201ENST00000257548 KIAA1468Q9P260 1216 aa14.18□□□□□ -0.14
USP30-201ENST00000257548 CAPZA3Q96KX2 299 aa14.18□□□□□ -0.14
USP30-201ENST00000257548 GOLPH3LQ9H4A5 285 aa14.18□□□□□ -0.14
USP30-201ENST00000257548 RRP15Q9Y3B9 282 aaKnown RBP14.18□□□□□ -0.14
USP30-201ENST00000257548 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
USP30-201ENST00000257548 SCRN1Q12765 414 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 SART3Q15020 963 aaKnown RBP14.17□□□□□ -0.14
USP30-201ENST00000257548 TM6SF1Q9BZW5 370 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 ROBO2Q9HCK4 1378 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 FILIP1LQ4L180 1135 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 LGR6Q9HBX8 967 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 HMG20BQ9P0W2 317 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 FEZ2Q9UHY8 353 aaPredicted RBP14.17□□□□□ -0.14
USP30-201ENST00000257548 ALKQ9UM73 1620 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 SSH2Q76I76 1423 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 CYP2C19P33261 490 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 AFMP43652 599 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 CHMP4BP1P59074 171 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 CCZ1BP86790 482 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 CCZ1P86791 482 aaPredicted RBP14.17□□□□□ -0.14
USP30-201ENST00000257548 NECTIN1Q15223 517 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 PARD6BQ9BYG5 372 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 DBF4Q9UBU7 674 aaPredicted RBP14.17□□□□□ -0.14
USP30-201ENST00000257548 ADAM21Q9UKJ8 722 aa14.17□□□□□ -0.14
USP30-201ENST00000257548 PNOCQ13519 176 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 GPIHBP1Q8IV16 184 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 NUP133Q8WUM0 1156 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 FANCLQ9NW38 375 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 ELP1O95163 1332 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 MYL5Q02045 173 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 CCDC102BQ68D86 513 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 CTR9Q6PD62 1173 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 IRX2Q9BZI1 471 aaPredicted RBP14.16□□□□□ -0.14
USP30-201ENST00000257548 MTMR7Q9Y216 660 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 ZFYVE9O95405 1425 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 SLC39A6Q13433 755 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 CCDC70Q6NSX1 233 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 MAP4K1Q92918 833 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 CLIC4Q9Y696 253 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 KIF24Q5T7B8 1368 aa14.16□□□□□ -0.14
USP30-201ENST00000257548 GRM8O00222 908 aa14.15□□□□□ -0.14
USP30-201ENST00000257548 IQCB1Q15051 598 aa14.15□□□□□ -0.14
USP30-201ENST00000257548 IL17REQ8NFR9 667 aa14.15□□□□□ -0.14
USP30-201ENST00000257548 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
USP30-201ENST00000257548 A2ML1A8K2U0 1454 aa14.15□□□□□ -0.14
USP30-201ENST00000257548 ARHGEF40Q8TER5 1519 aa14.15□□□□□ -0.14
USP30-201ENST00000257548 LONRF2Q1L5Z9 754 aa14.15□□□□□ -0.14
USP30-201ENST00000257548 ARMCX5Q6P1M9 558 aa14.15□□□□□ -0.14
USP30-201ENST00000257548 DHX32Q7L7V1 743 aaKnown RBP14.15□□□□□ -0.14
USP30-201ENST00000257548 TTC5Q8N0Z6 440 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms