RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 USP37Q86T82 979 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 TBC1D5Q92609 795 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 EYA3Q99504 573 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 SLC8A1P32418 973 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 DAPK1P53355 1430 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 UBASH3AP57075 661 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 DZIP1Q86YF9 867 aaKnown RBP9.3□□□□□ -0.92
DSG3-201ENST00000257189 KDM2BQ8NHM5 1336 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 FERMT2Q96AC1 680 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 SEC63Q9UGP8 760 aaKnown RBP9.3□□□□□ -0.92
DSG3-201ENST00000257189 VCX3AQ9NNX9 186 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 NKIRAS1Q9NYS0 192 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 LARSQ9P2J5 1176 aaKnown RBP9.3□□□□□ -0.92
DSG3-201ENST00000257189 COMMD10Q9Y6G5 202 aa9.3□□□□□ -0.92
DSG3-201ENST00000257189 TSPOAP1O95153 1857 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 NDC80O14777 642 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 PRC1O43663 620 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 PPFIA2O75334 1257 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 MAP3K21Q5TCX8 1036 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 FYB2Q5VWT5 728 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 CALML4Q96GE6 196 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 MPHOSPH6Q99547 160 aaKnown RBP9.29□□□□□ -0.92
DSG3-201ENST00000257189 MATR3P43243 847 aaKnown RBP eCLIP9.29□□□□□ -0.92
DSG3-201ENST00000257189 ALDH1L2Q3SY69 923 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 AACSQ86V21 672 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 RNF41Q9H4P4 317 aaPredicted RBP9.29□□□□□ -0.92
DSG3-201ENST00000257189 HMG20BQ9P0W2 317 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 HFM1A2PYH4 1435 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 TMEM94Q12767 1356 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 ABCC11Q96J66 1382 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 CNGA1P29973 690 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 PRPF4BQ13523 1007 aaKnown RBP9.29□□□□□ -0.92
DSG3-201ENST00000257189 SLF2Q8IX21 1173 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 THEGQ9P2T0 379 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 FAN1Q9Y2M0 1017 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 N4BP3O15049 544 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 CLUL1Q15846 466 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 PPP1R42Q7Z4L9 355 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 UNC5CLQ8IV45 518 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 IFNL2Q8IZJ0 200 aa9.29□□□□□ -0.92
DSG3-201ENST00000257189 RAB3IPQ96QF0 476 aaPredicted RBP9.29□□□□□ -0.92
DSG3-201ENST00000257189 RASSF2P50749 326 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 KIF5AQ12840 1032 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 KCNG4Q8TDN1 519 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 CPLX3Q8WVH0 158 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 CDCA7LQ96GN5 454 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 SELENOSQ9BQE4 189 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 TCP11L1Q9NUJ3 509 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 ARAP1Q96P48 1450 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 PPFIA4O75335 1185 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 ECM2O94769 699 aaPredicted RBP9.28□□□□□ -0.92
DSG3-201ENST00000257189 XRCC6P12956 609 aaKnown RBP eCLIP9.28□□□□□ -0.92
DSG3-201ENST00000257189 CWC27Q6UX04 472 aaKnown RBP9.28□□□□□ -0.92
DSG3-201ENST00000257189 RUFY4Q6ZNE9 571 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 MIER3Q7Z3K6 550 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 WAPLQ7Z5K2 1190 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 SPATS2LQ9NUQ6 558 aaKnown RBP9.28□□□□□ -0.92
DSG3-201ENST00000257189 RBM27Q9P2N5 1060 aaKnown RBP9.28□□□□□ -0.92
DSG3-201ENST00000257189 KDM4AO75164 1064 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 CKAP2LQ8IYA6 745 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 CABLES1Q8TDN4 633 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 SEC62Q99442 399 aaKnown RBP9.28□□□□□ -0.92
DSG3-201ENST00000257189 NYXQ9GZU5 481 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 TSPYL2Q9H2G4 693 aaPredicted RBP9.28□□□□□ -0.92
DSG3-201ENST00000257189 MACROD2A1Z1Q3 448 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 NDUFAB1O14561 156 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 MGEA5O60502 916 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 DNAJC8O75937 253 aaPredicted RBP9.28□□□□□ -0.92
DSG3-201ENST00000257189 SSRP1Q08945 709 aaKnown RBP9.28□□□□□ -0.92
DSG3-201ENST00000257189 CCDC96Q2M329 555 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 GBP5Q96PP8 586 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 NUF2Q9BZD4 464 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 MTMR7Q9Y216 660 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 CFAP74Q9C0B2 1584 aa9.28□□□□□ -0.92
DSG3-201ENST00000257189 H7C1D1 291 aa9.27□□□□□ -0.92
DSG3-201ENST00000257189 GNPATO15228 680 aa9.27□□□□□ -0.92
DSG3-201ENST00000257189 CCDC186Q7Z3E2 898 aa9.27□□□□□ -0.92
DSG3-201ENST00000257189 HOOK2Q96ED9 719 aa9.27□□□□□ -0.92
DSG3-201ENST00000257189 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.92
DSG3-201ENST00000257189 WDR97A6NE52 1622 aa9.27□□□□□ -0.92
DSG3-201ENST00000257189 SLC4A2P04920 1241 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 CCDC14Q49A88 953 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 BMP2KLQ5H9B9 411 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 ZMAT2Q96NC0 199 aaKnown RBP9.27□□□□□ -0.93
DSG3-201ENST00000257189 HSP90AA5PQ58FG0 334 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 HDGFL1Q5TGJ6 251 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 SNX21Q969T3 373 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 DRC1Q96MC2 740 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 PHLDB3Q6NSJ2 640 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 FERMT3Q86UX7 667 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 MTUS1Q9ULD2 1270 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 GCKP35557 465 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 R3HDM1Q15032 1099 aaKnown RBP9.27□□□□□ -0.93
DSG3-201ENST00000257189 CEP85LQ5SZL2 805 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 RNF10Q8N5U6 811 aaKnown RBP9.27□□□□□ -0.93
DSG3-201ENST00000257189 CCDC26Q8TAB7 109 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 TBC1D32Q96NH3 1257 aa9.27□□□□□ -0.93
DSG3-201ENST00000257189 EHBP1L1Q8N3D4 1523 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms