RNA–Protein interactions for RNA: ENST00000256062.9

TMTC1-201, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene TMTC1, Length 8,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-201ENST00000256062 FCHSD1Q86WN1 690 aa9.9□□□□□ -0.83
TMTC1-201ENST00000256062 RSPH14Q9UHP6 348 aa9.9□□□□□ -0.83
TMTC1-201ENST00000256062 APOBRQ0VD83 1088 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 TIGD1Q96MW7 591 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 RMND1Q9NWS8 449 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 CCDC186Q7Z3E2 898 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 IFT81Q8WYA0 676 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 KIF21BO75037 1637 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 LMOD1P29536 600 aaPredicted RBP9.89□□□□□ -0.83
TMTC1-201ENST00000256062 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 KRT9P35527 623 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 HMGB2P26583 209 aaKnown RBP9.89□□□□□ -0.83
TMTC1-201ENST00000256062 BIRC3Q13489 604 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 SPATA24Q86W54 205 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
TMTC1-201ENST00000256062 RNF34Q969K3 372 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 GUCA1BQ9UMX6 200 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 PIK3R4Q99570 1358 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 ZBTB16Q05516 673 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 CCDC114Q96M63 670 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 CTAGE15A4D2H0 777 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 DDX39AO00148 427 aaKnown RBP9.89□□□□□ -0.83
TMTC1-201ENST00000256062 CTAGE8P0CG41 777 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 TPD52P55327 224 aaPredicted RBP9.89□□□□□ -0.83
TMTC1-201ENST00000256062 KRT79Q5XKE5 535 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 CTAGE6Q86UF2 777 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 CTAGE4Q8IX94 777 aa9.89□□□□□ -0.83
TMTC1-201ENST00000256062 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.89□□□□□ -0.83
TMTC1-201ENST00000256062 KIF4AO95239 1232 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 SDSP20132 328 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 NCBP1Q09161 790 aaKnown RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 PPP2R5CQ13362 524 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 RRP36Q96EU6 259 aaKnown RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 LZTFL1Q9NQ48 299 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 KIF21AQ7Z4S6 1674 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 CCDC172P0C7W6 258 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 SKILP12757 684 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 KRT5P13647 590 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 ERCC5P28715 1186 aaPredicted RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 DNM1Q05193 864 aaKnown RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 KANK3Q6NY19 840 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 KCNK9Q9NPC2 374 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 ZSCAN22P10073 491 aaPredicted RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 ZSCAN23Q3MJ62 389 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 USP37Q86T82 979 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 DACT1Q9NYF0 836 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 FAM169AQ9Y6X4 670 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 CYLC1P35663 651 aaPredicted RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 MRPS27Q92552 414 aaKnown RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 LRRC45Q96CN5 670 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 ATP6V0A2Q9Y487 856 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 RFX1P22670 979 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 HSPA2P54652 639 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 RNASE9P60153 205 aaKnown RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 IFI16Q16666 785 aaKnown RBP9.88□□□□□ -0.83
TMTC1-201ENST00000256062 HAUS7Q99871 368 aa9.88□□□□□ -0.83
TMTC1-201ENST00000256062 KRT24Q2M2I5 525 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 SREK1Q8WXA9 508 aaKnown RBP9.87□□□□□ -0.83
TMTC1-201ENST00000256062 PSMA7O14818 248 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 SORBS3O60504 671 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 UBXN1Q04323 297 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 FAM160A1Q05DH4 1040 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 USP48Q86UV5 1035 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 PFDN4Q9NQP4 134 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 NCAPD3P42695 1498 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 IRS4O14654 1257 aaPredicted RBP9.87□□□□□ -0.83
TMTC1-201ENST00000256062 HGSO14964 777 aaPredicted RBP9.87□□□□□ -0.83
TMTC1-201ENST00000256062 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.87□□□□□ -0.83
TMTC1-201ENST00000256062 PTPRCP08575 1304 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 POTEB2H3BUK9 544 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 RHOXF2BP0C7M4 288 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 RHOXF2Q9BQY4 288 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 GNPATO15228 680 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 TFCP2Q12800 502 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 ZNF174Q15697 407 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 TMCO4Q5TGY1 634 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 CCDC65Q8IXS2 484 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 RASAL2Q9UJF2 1139 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 TNNQ9UQP3 1299 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 PLEKHH1Q9ULM0 1364 aa9.87□□□□□ -0.83
TMTC1-201ENST00000256062 SF3A3Q12874 501 aaKnown RBP eCLIP9.86□□□□□ -0.83
TMTC1-201ENST00000256062 PAG1Q9NWQ8 432 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 SYT1P21579 422 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 NFATC2IPQ8NCF5 419 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 CCDC169A6NNP5 214 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 MAP7D1Q3KQU3 841 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 MCMDC2Q4G0Z9 681 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 TRIM75PA6NK02 468 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 CPA1P15085 419 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 GEN1Q17RS7 908 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 LETM2Q2VYF4 491 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 CCDC117Q8IWD4 279 aaPredicted RBP9.86□□□□□ -0.83
TMTC1-201ENST00000256062 PLVAPQ9BX97 442 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 HMG20BQ9P0W2 317 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 GRIN2BQ13224 1484 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 UBE2HP62256 183 aa9.86□□□□□ -0.83
TMTC1-201ENST00000256062 SMC1BQ8NDV3 1235 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms