RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 ABCC2Q92887 1545 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 TNNC1P63316 161 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 DZIP1Q86YF9 867 aaKnown RBP14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 IFT81Q8WYA0 676 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 UTP14AQ9BVJ6 771 aaKnown RBP14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 CNNM1Q9NRU3 951 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 PEX19P40855 299 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 SEPT14Q6ZU15 432 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 CEP128Q6ZU80 1094 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 SPATS2Q86XZ4 545 aaKnown RBP14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 TESK2Q96S53 571 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 RMND1Q9NWS8 449 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 CIB2O75838 187 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 GRIPAP1Q4V328 841 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 TBC1D31Q96DN5 1066 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 CAPZA3Q96KX2 299 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 TRIM47Q96LD4 638 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 LARP6Q9BRS8 491 aaKnown RBP14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 IFNKQ9P0W0 207 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 ACTN2P35609 894 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 TTC22Q5TAA0 569 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 RAB11FIP4Q86YS3 637 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 GBP5Q96PP8 586 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 GUCA1BQ9UMX6 200 aa14.92□□□□□ -0.02
PCDHGA3-201ENST00000253812 FAM160A1Q05DH4 1040 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 UHRF1BP1LA0JNW5 1464 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 ZBTB17Q13105 803 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 CERS3Q8IU89 383 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 LRRC45Q96CN5 670 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 MTRF1LQ9UGC7 380 aaKnown RBP14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 CAPN7Q9Y6W3 813 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 ABCC11Q96J66 1382 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 ATP2A1O14983 1001 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 DNM1Q05193 864 aaKnown RBP14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 HDAC1Q13547 482 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 LMBR1Q8WVP7 490 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 CCDC42Q96M95 316 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 MPHOSPH8Q99549 860 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 ORC3Q9UBD5 711 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 TEX14Q8IWB6 1497 aa14.91□□□□□ -0.02
PCDHGA3-201ENST00000253812 AKAP2Q9Y2D5 859 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 GOLGA8BA8MQT2 603 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 PTCD1O75127 700 aaKnown RBP14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 ZBTB9Q96C00 473 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 NKIRAS1Q9NYS0 192 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 CCT2P78371 535 aaKnown RBP14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 TAF7Q15545 349 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 MPRIPQ6WCQ1 1025 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 TSNARE1Q96NA8 513 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 SPAG5Q96R06 1193 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 USH1CQ9Y6N9 552 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 NSD2O96028 1365 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 GOLGA6BA6NDN3 693 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 POLR3DP05423 398 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 HPDP32754 393 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 DBN1Q16643 649 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 PUS7Q96PZ0 661 aaKnown RBP14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 BAG1Q99933 345 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 HMG20BQ9P0W2 317 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 RABGAP1Q9Y3P9 1069 aa14.9□□□□□ -0.02
PCDHGA3-201ENST00000253812 RUFY4Q6ZNE9 571 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 INTS4Q96HW7 963 aaKnown RBP14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 CETN3O15182 167 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 PPP2R5AQ15172 486 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 JRKLQ9Y4A0 524 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 TRIM27P14373 513 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 KRT28Q7Z3Y7 464 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 CNGA4Q8IV77 575 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 RNF10Q8N5U6 811 aaKnown RBP14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 KCNK9Q9NPC2 374 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 UBA7P41226 1012 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 SSRP1Q08945 709 aaKnown RBP14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 TMEM266Q2M3C6 531 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 TCP11L1Q9NUJ3 509 aa14.89□□□□□ -0.03
PCDHGA3-201ENST00000253812 FAM83GA6ND36 823 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 PPFIA3O75145 1194 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 USP16Q9Y5T5 823 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 LUC7L3O95232 432 aaKnown RBP14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 ARHGAP24Q8N264 748 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 NEK11Q8NG66 645 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 PPFIA4O75335 1185 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 ATP5DP30049 168 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 TCERG1LQ5VWI1 586 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 VSIG1Q86XK7 387 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 AIDAQ96BJ3 306 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 NAPGQ99747 312 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 IARSP41252 1262 aaKnown RBP14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 NUCB1Q02818 461 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 HSP90AA4PQ58FG1 418 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 APBB1IPQ7Z5R6 666 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 PPP1R9BQ96SB3 815 aa14.88□□□□□ -0.03
PCDHGA3-201ENST00000253812 F6X3S4 739 aa14.87□□□□□ -0.03
PCDHGA3-201ENST00000253812 BRD3Q15059 726 aa14.87□□□□□ -0.03
PCDHGA3-201ENST00000253812 CROCCP2Q86T23 111 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms