RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 CCDC191Q8NCU4 936 aa18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 IL17REQ8NFR9 667 aa18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 GOLIM4O00461 696 aa18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 HOXC9P31274 260 aa18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 SYCP1Q15431 976 aa18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 HOOK1Q9UJC3 728 aaKnown RBP18.4■□□□□ 0.54
SLC6A8-201ENST00000253122 DHX8Q14562 1220 aaKnown RBP18.39■□□□□ 0.54
SLC6A8-201ENST00000253122 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.54
SLC6A8-201ENST00000253122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.39■□□□□ 0.541e-12■■■□□ 16.1
SLC6A8-201ENST00000253122 FMN2Q9NZ56 1722 aa18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 TXLNBQ8N3L3 684 aa18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 TSPYL1Q9H0U9 437 aa18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 MORC2Q9Y6X9 1032 aaPredicted RBP18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 PTPN21Q16825 1174 aa18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 CCDC12Q8WUD4 166 aaPredicted RBP18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 MYD88Q99836 296 aa18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 ORC3Q9UBD5 711 aaPredicted RBP18.39■□□□□ 0.53
SLC6A8-201ENST00000253122 GRM8O00222 908 aa18.38■□□□□ 0.53
SLC6A8-201ENST00000253122 JMYQ8N9B5 988 aa18.38■□□□□ 0.53
SLC6A8-201ENST00000253122 RGPD8O14715 1765 aaPredicted RBP18.38■□□□□ 0.53
SLC6A8-201ENST00000253122 NECTIN1Q15223 517 aa18.38■□□□□ 0.53
SLC6A8-201ENST00000253122 MAP4K1Q92918 833 aa18.38■□□□□ 0.53
SLC6A8-201ENST00000253122 BICC1Q9H694 974 aaKnown RBP18.38■□□□□ 0.53
SLC6A8-201ENST00000253122 KARSQ15046 597 aaKnown RBP18.37■□□□□ 0.53
SLC6A8-201ENST00000253122 TTC5Q8N0Z6 440 aa18.37■□□□□ 0.53
SLC6A8-201ENST00000253122 SEC31AO94979 1220 aaKnown RBP18.37■□□□□ 0.53
SLC6A8-201ENST00000253122 SLFN14P0C7P3 912 aa18.37■□□□□ 0.53
SLC6A8-201ENST00000253122 KIF4BQ2VIQ3 1234 aa18.37■□□□□ 0.53
SLC6A8-201ENST00000253122 JAKMIP3Q5VZ66 844 aa18.37■□□□□ 0.53
SLC6A8-201ENST00000253122 LGR6Q9HBX8 967 aa18.37■□□□□ 0.53
SLC6A8-201ENST00000253122 KCNQ3O43525 872 aa18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 PHACTR2O75167 634 aa18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 HMGB1P09429 215 aaKnown RBP18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 KLHL10Q6JEL2 608 aa18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 SEC62Q99442 399 aaKnown RBP18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 ARHGEF10O15013 1369 aa18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 GOLGA8BA8MQT2 603 aa18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 CLCN6P51797 869 aa18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 PPFIBP1Q86W92 1011 aa18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 SPTLC2O15270 562 aa18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 HNRNPH2P55795 449 aaKnown RBP18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 DHX37Q8IY37 1157 aaKnown RBP18.36■□□□□ 0.53
SLC6A8-201ENST00000253122 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 ZNF589Q86UQ0 364 aaPredicted RBP18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 TLR7Q9NYK1 1049 aaKnown RBP18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 ERLIN1O75477 346 aa18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 SYKP43405 635 aa18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 OAS2P29728 719 aaKnown RBP18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 FANCCQ00597 558 aa18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 MCMDC2Q4G0Z9 681 aa18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 KSR2Q6VAB6 950 aa18.35■□□□□ 0.53
SLC6A8-201ENST00000253122 GCP02774 474 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 UBE3BQ7Z3V4 1068 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 CNNM3Q8NE01 707 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 PPP1R13BQ96KQ4 1090 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 PUF60Q9UHX1 559 aaKnown RBP18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 ATP5J2-PTCD1G3V325 749 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 PTCD1O75127 700 aaKnown RBP18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 ETF1P62495 437 aaKnown RBP18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 GOLGA8FQ08AF8 430 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 GOLGA8DPQ0D2H9 430 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 SAFBQ15424 915 aaKnown RBP eCLIP18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 DHX32Q7L7V1 743 aaKnown RBP18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 IP6K1Q92551 441 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 ACBD3Q9H3P7 528 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 FAM193AP78312 1265 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 BEND3Q5T5X7 828 aa18.34■□□□□ 0.53
SLC6A8-201ENST00000253122 IRX5P78411 483 aaPredicted RBP18.33■□□□□ 0.53
SLC6A8-201ENST00000253122 LRRFIP1Q32MZ4 808 aaKnown RBP18.33■□□□□ 0.53
SLC6A8-201ENST00000253122 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.53
SLC6A8-201ENST00000253122 CCDC85AQ96PX6 553 aaPredicted RBP18.33■□□□□ 0.53
SLC6A8-201ENST00000253122 NRKQ7Z2Y5 1582 aa18.33■□□□□ 0.53
SLC6A8-201ENST00000253122 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.52
SLC6A8-201ENST00000253122 CAPN2P17655 700 aa18.33■□□□□ 0.52
SLC6A8-201ENST00000253122 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
SLC6A8-201ENST00000253122 DPCR1Q3MIW9 517 aa18.33■□□□□ 0.52
SLC6A8-201ENST00000253122 TSR1Q2NL82 804 aaKnown RBP18.33■□□□□ 0.52
SLC6A8-201ENST00000253122 KCNG4Q8TDN1 519 aa18.33■□□□□ 0.52
SLC6A8-201ENST00000253122 SUCLG2Q96I99 432 aa18.33■□□□□ 0.52
SLC6A8-201ENST00000253122 VPS18Q9P253 973 aa18.33■□□□□ 0.52
SLC6A8-201ENST00000253122 CCDC82Q8N4S0 544 aa18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 SRRTQ9BXP5 876 aaKnown RBP18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 ZCCHC17Q9NP64 241 aaKnown RBP18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 LZTFL1Q9NQ48 299 aa18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 MAP3K5Q99683 1374 aa18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 PNMA6AP0CW24 399 aaPredicted RBP18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 CDC25BP30305 580 aa18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 RASSF4Q9H2L5 321 aa18.32■□□□□ 0.52
SLC6A8-201ENST00000253122 SMC1AQ14683 1233 aaKnown RBP18.31■□□□□ 0.52
SLC6A8-201ENST00000253122 AXDND1Q5T1B0 1012 aaPredicted RBP18.31■□□□□ 0.52
SLC6A8-201ENST00000253122 EPC1Q9H2F5 836 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms