RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 CNNM3Q8NE01 707 aa19.73■□□□□ 0.75
ACTN4-201ENST00000252699 OGFOD1Q8N543 542 aa19.73■□□□□ 0.75
ACTN4-201ENST00000252699 ADGRL3Q9HAR2 1447 aa19.73■□□□□ 0.75
ACTN4-201ENST00000252699 APPBP2Q92624 585 aa19.73■□□□□ 0.75
ACTN4-201ENST00000252699 WWC3Q9ULE0 1092 aa19.73■□□□□ 0.75
ACTN4-201ENST00000252699 HIBADHP31937 336 aaKnown RBP19.72■□□□□ 0.75
ACTN4-201ENST00000252699 CT47A1Q5JQC4 288 aaPredicted RBP19.72■□□□□ 0.75
ACTN4-201ENST00000252699 KLHL10Q6JEL2 608 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 RAB34Q9BZG1 259 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 RBM27Q9P2N5 1060 aaKnown RBP19.72■□□□□ 0.75
ACTN4-201ENST00000252699 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 CFAP100Q494V2 611 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 RBM17Q96I25 401 aaKnown RBP19.72■□□□□ 0.75
ACTN4-201ENST00000252699 PANK2Q9BZ23 570 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 LOC102724428A0A0B4J2F2 783 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 SIK1P57059 783 aa19.72■□□□□ 0.75
ACTN4-201ENST00000252699 EAF2Q96CJ1 260 aaPredicted RBP19.72■□□□□ 0.75
ACTN4-201ENST00000252699 CCDC178Q5BJE1 867 aa19.71■□□□□ 0.75
ACTN4-201ENST00000252699 INTS4Q96HW7 963 aaKnown RBP19.71■□□□□ 0.75
ACTN4-201ENST00000252699 CNPY2Q9Y2B0 182 aa19.71■□□□□ 0.75
ACTN4-201ENST00000252699 PLCG2P16885 1265 aa19.71■□□□□ 0.75
ACTN4-201ENST00000252699 MYO1BO43795 1136 aa19.71■□□□□ 0.75
ACTN4-201ENST00000252699 F13A1P00488 732 aa19.71■□□□□ 0.75
ACTN4-201ENST00000252699 UFL1O94874 794 aa19.71■□□□□ 0.75
ACTN4-201ENST00000252699 CUL5Q93034 780 aa19.71■□□□□ 0.75
ACTN4-201ENST00000252699 EYA3Q99504 573 aa19.7■□□□□ 0.74
ACTN4-201ENST00000252699 CAMSAP1Q5T5Y3 1602 aa19.7■□□□□ 0.74
ACTN4-201ENST00000252699 CCP110O43303 1012 aa19.7■□□□□ 0.74
ACTN4-201ENST00000252699 ATP5JP18859 108 aa19.7■□□□□ 0.74
ACTN4-201ENST00000252699 TMEM266Q2M3C6 531 aa19.7■□□□□ 0.74
ACTN4-201ENST00000252699 AXIN2Q9Y2T1 843 aa19.7■□□□□ 0.74
ACTN4-201ENST00000252699 SLC27A2O14975 620 aa19.7■□□□□ 0.74
ACTN4-201ENST00000252699 EDC3Q96F86 508 aaKnown RBP19.7■□□□□ 0.74
ACTN4-201ENST00000252699 CTSWP56202 376 aa19.7■□□□□ 0.74
ACTN4-201ENST00000252699 ZBTB38Q8NAP3 1195 aaPredicted RBP19.7■□□□□ 0.74
ACTN4-201ENST00000252699 SETBP1Q9Y6X0 1596 aa19.69■□□□□ 0.74
ACTN4-201ENST00000252699 GSPT1P15170 499 aaKnown RBP19.69■□□□□ 0.74
ACTN4-201ENST00000252699 GNAQP50148 359 aa19.69■□□□□ 0.74
ACTN4-201ENST00000252699 GPAA1O43292 621 aa19.69■□□□□ 0.74
ACTN4-201ENST00000252699 DNM1Q05193 864 aaKnown RBP19.69■□□□□ 0.74
ACTN4-201ENST00000252699 HDAC9Q9UKV0 1011 aa19.69■□□□□ 0.74
ACTN4-201ENST00000252699 PCCAP05165 728 aaPredicted RBP19.69■□□□□ 0.74
ACTN4-201ENST00000252699 NBPF14Q5TI25 921 aa19.69■□□□□ 0.74
ACTN4-201ENST00000252699 SNX14Q9Y5W7 946 aa19.69■□□□□ 0.74
ACTN4-201ENST00000252699 BIN1O00499 593 aa19.69■□□□□ 0.74
ACTN4-201ENST00000252699 ZAP70P43403 619 aa19.69■□□□□ 0.74
ACTN4-201ENST00000252699 MROH5Q6ZUA9 1318 aa19.68■□□□□ 0.74
ACTN4-201ENST00000252699 ESPNB1AK53 854 aa19.68■□□□□ 0.74
ACTN4-201ENST00000252699 ZBTB1Q9Y2K1 713 aa19.68■□□□□ 0.74
ACTN4-201ENST00000252699 USP48Q86UV5 1035 aa19.68■□□□□ 0.74
ACTN4-201ENST00000252699 MAP3K15Q6ZN16 1313 aa19.68■□□□□ 0.74
ACTN4-201ENST00000252699 HSP90AA2PQ14568 343 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-201ENST00000252699 PTPDC1A2A3K4 754 aa19.67■□□□□ 0.74
ACTN4-201ENST00000252699 RAB3GAP1Q15042 981 aa19.67■□□□□ 0.74
ACTN4-201ENST00000252699 ARMT1Q9H993 441 aa19.67■□□□□ 0.74
ACTN4-201ENST00000252699 TCP11L1Q9NUJ3 509 aa19.67■□□□□ 0.74
ACTN4-201ENST00000252699 IBTKQ9P2D0 1353 aaPredicted RBP19.67■□□□□ 0.74
ACTN4-201ENST00000252699 UBA7P41226 1012 aa19.67■□□□□ 0.74
ACTN4-201ENST00000252699 GPS2Q13227 327 aa19.67■□□□□ 0.74
ACTN4-201ENST00000252699 STK32BQ9NY57 414 aa19.67■□□□□ 0.74
ACTN4-201ENST00000252699 TNIP1Q15025 636 aa19.67■□□□□ 0.74
ACTN4-201ENST00000252699 RXRAP19793 462 aa19.66■□□□□ 0.74
ACTN4-201ENST00000252699 RPS6KB1P23443 525 aa19.66■□□□□ 0.74
ACTN4-201ENST00000252699 RPS8P62241 208 aaKnown RBP19.66■□□□□ 0.74
ACTN4-201ENST00000252699 USP25Q9UHP3 1055 aa19.66■□□□□ 0.74
ACTN4-201ENST00000252699 TTLL12Q14166 644 aaPredicted RBP19.66■□□□□ 0.74
ACTN4-201ENST00000252699 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
ACTN4-201ENST00000252699 GIGYF2Q6Y7W6 1299 aaKnown RBP19.66■□□□□ 0.74
ACTN4-201ENST00000252699 GGA1Q9UJY5 639 aa19.66■□□□□ 0.74
ACTN4-201ENST00000252699 CYP27B1O15528 508 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 CCDC102BQ68D86 513 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 DEF6Q9H4E7 631 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 KIDINS220Q9ULH0 1771 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 B4E1Z4 1266 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 APBA3O96018 575 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 KCNG4Q8TDN1 519 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 ZKSCAN3Q9BRR0 538 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 CRKLP46109 303 aaKnown RBP19.65■□□□□ 0.74
ACTN4-201ENST00000252699 GIMAP6Q6P9H5 292 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 SPATA5Q8NB90 893 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 COPRSQ9NQ92 184 aa19.65■□□□□ 0.74
ACTN4-201ENST00000252699 CLTCQ00610 1675 aaKnown RBP19.65■□□□□ 0.74
ACTN4-201ENST00000252699 CALM1P0DP23 149 aa19.64■□□□□ 0.74
ACTN4-201ENST00000252699 CALM2P0DP24 149 aa19.64■□□□□ 0.74
ACTN4-201ENST00000252699 CALM3P0DP25 149 aa19.64■□□□□ 0.74
ACTN4-201ENST00000252699 SYT1P21579 422 aa19.64■□□□□ 0.74
ACTN4-201ENST00000252699 POLD1P28340 1107 aa19.64■□□□□ 0.74
ACTN4-201ENST00000252699 ZNF165P49910 485 aa19.64■□□□□ 0.74
ACTN4-201ENST00000252699 EIF5P55010 431 aaKnown RBP19.64■□□□□ 0.74
ACTN4-201ENST00000252699 LRRC24Q50LG9 513 aa19.64■□□□□ 0.73
ACTN4-201ENST00000252699 CAGE1Q8TC20 777 aa19.64■□□□□ 0.73
ACTN4-201ENST00000252699 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.73
ACTN4-201ENST00000252699 CDC42BPGQ6DT37 1551 aa19.64■□□□□ 0.73
ACTN4-201ENST00000252699 AGLP35573 1532 aa19.64■□□□□ 0.73
ACTN4-201ENST00000252699 QRICH2Q9H0J4 1663 aa19.64■□□□□ 0.73
ACTN4-201ENST00000252699 ZSCAN23Q3MJ62 389 aa19.64■□□□□ 0.73
ACTN4-201ENST00000252699 HEATR3Q7Z4Q2 680 aa19.64■□□□□ 0.73
ACTN4-201ENST00000252699 RTL9Q8NET4 1388 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms