RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 GNPATO15228 680 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 ATG9AQ7Z3C6 839 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 KCNB2Q92953 911 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 NIP7Q9Y221 180 aaKnown RBP eCLIP20.1■□□□□ 0.81
FOXA1-201ENST00000250448 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 ST3GAL1Q11201 340 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 ECHDC1Q9NTX5 307 aa20.1■□□□□ 0.81
FOXA1-201ENST00000250448 VPS37CA5D8V6 355 aaPredicted RBP20.09■□□□□ 0.81
FOXA1-201ENST00000250448 TRIM37O94972 964 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 CCDC57Q2TAC2 916 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 GREM2Q9H772 168 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 SRP68Q9UHB9 627 aaKnown RBP20.09■□□□□ 0.81
FOXA1-201ENST00000250448 NDUFB9Q9Y6M9 179 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 SBF2Q86WG5 1849 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 ANKRD36CQ5JPF3 1778 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 KRT27Q7Z3Y8 459 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 NAP1L2Q9ULW6 460 aaPredicted RBP20.09■□□□□ 0.81
FOXA1-201ENST00000250448 AP5Z1O43299 807 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 TNNI3KQ59H18 835 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 FPGT-TNNI3KV9GXZ4 949 aa20.09■□□□□ 0.81
FOXA1-201ENST00000250448 DTNBO60941 627 aa20.08■□□□□ 0.81
FOXA1-201ENST00000250448 CCDC94Q9BW85 323 aaPredicted RBP20.08■□□□□ 0.81
FOXA1-201ENST00000250448 BOLA2Q9H3K6 86 aa20.08■□□□□ 0.81
FOXA1-201ENST00000250448 DBNLQ9UJU6 430 aaKnown RBP20.08■□□□□ 0.81
FOXA1-201ENST00000250448 BRWD3Q6RI45 1802 aa20.08■□□□□ 0.81
FOXA1-201ENST00000250448 TTLL11Q8NHH1 800 aa20.08■□□□□ 0.8
FOXA1-201ENST00000250448 GPATCH3Q96I76 525 aa20.08■□□□□ 0.8
FOXA1-201ENST00000250448 TPM3P06753 285 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 TIMM10P62072 90 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 ME3Q16798 604 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 SMAP1Q8IYB5 467 aaPredicted RBP20.07■□□□□ 0.8
FOXA1-201ENST00000250448 DBNDD2Q9BQY9 259 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 LRRC4BQ9NT99 713 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 CCDC171Q6TFL3 1326 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 RREB1Q92766 1687 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 CCDC192P0DO97 292 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 ZNF710Q8N1W2 664 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 TSC1Q92574 1164 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 NEUROD6Q96NK8 337 aa20.07■□□□□ 0.8
FOXA1-201ENST00000250448 CTSWP56202 376 aa20.06■□□□□ 0.8
FOXA1-201ENST00000250448 EDC3Q96F86 508 aaKnown RBP20.06■□□□□ 0.8
FOXA1-201ENST00000250448 KCNF1Q9H3M0 494 aa20.06■□□□□ 0.8
FOXA1-201ENST00000250448 EYA2O00167 538 aa20.06■□□□□ 0.8
FOXA1-201ENST00000250448 IFIT5Q13325 482 aaKnown RBP20.06■□□□□ 0.8
FOXA1-201ENST00000250448 KIAA1524Q8TCG1 905 aa20.06■□□□□ 0.8
FOXA1-201ENST00000250448 CSF1RP07333 972 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 ITGA6P23229 1130 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 NECTIN1Q15223 517 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 NECAB1Q8N987 351 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 CDHR2Q9BYE9 1310 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 CNTNAP4Q9C0A0 1308 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
FOXA1-201ENST00000250448 EVI5LQ96CN4 794 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 PLA2G12BQ9BX93 195 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 UTP14AQ9BVJ6 771 aaKnown RBP20.05■□□□□ 0.8
FOXA1-201ENST00000250448 PYCARDQ9ULZ3 195 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 KIF3AQ9Y496 699 aa20.05■□□□□ 0.8
FOXA1-201ENST00000250448 RBM8AQ9Y5S9 174 aaKnown RBP20.05■□□□□ 0.8
FOXA1-201ENST00000250448 CICQ96RK0 1608 aaPredicted RBP20.04■□□□□ 0.8
FOXA1-201ENST00000250448 KRT85P78386 507 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 TTC6Q86TZ1 520 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 GOLGA6L6A8MZA4 724 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 CREB3L3Q68CJ9 461 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 CCDC24Q8N4L8 307 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 SH3TC1Q8TE82 1336 aa20.04■□□□□ 0.8
FOXA1-201ENST00000250448 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 PRDM4Q9UKN5 801 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 TPCN1Q9ULQ1 816 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 PDE8AO60658 829 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 RPS6KA4O75676 772 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 LARP1BQ659C4 914 aaKnown RBP20.03■□□□□ 0.8
FOXA1-201ENST00000250448 TBC1D9BQ66K14 1250 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 SPC24Q8NBT2 197 aa20.03■□□□□ 0.8
FOXA1-201ENST00000250448 IL15P40933 162 aaPredicted RBP20.02■□□□□ 0.8
FOXA1-201ENST00000250448 FAM200AQ8TCP9 573 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 NUP62CLQ9H1M0 184 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 ELP1O95163 1332 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 NTSR2O95665 410 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 KCNJ4P48050 445 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 MAP3K11Q16584 847 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 CDC37L1Q7L3B6 337 aa20.02■□□□□ 0.8
FOXA1-201ENST00000250448 RTCBQ9Y3I0 505 aaKnown RBP20.02■□□□□ 0.8
FOXA1-201ENST00000250448 ARHGEF1Q92888 912 aaKnown RBP20.01■□□□□ 0.79
FOXA1-201ENST00000250448 SEC31BQ9NQW1 1179 aa20.01■□□□□ 0.79
FOXA1-201ENST00000250448 LDHAL6AQ6ZMR3 332 aa20.01■□□□□ 0.79
FOXA1-201ENST00000250448 ZNF652Q9Y2D9 606 aa20.01■□□□□ 0.79
FOXA1-201ENST00000250448 HIP1O00291 1037 aa20.01■□□□□ 0.79
FOXA1-201ENST00000250448 RBM6P78332 1123 aaKnown RBP20.01■□□□□ 0.79
FOXA1-201ENST00000250448 NMIQ13287 307 aaPredicted RBP20.01■□□□□ 0.79
FOXA1-201ENST00000250448 BBXQ8WY36 941 aaPredicted RBP20.01■□□□□ 0.79
FOXA1-201ENST00000250448 LIG1P18858 919 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 PSMA5P28066 241 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 TYRO3Q06418 890 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 FERMT3Q86UX7 667 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 MAP4K1Q92918 833 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 FAM227BQ96M60 508 aa20■□□□□ 0.79
FOXA1-201ENST00000250448 DNAJC2Q99543 621 aaKnown RBP20■□□□□ 0.79
FOXA1-201ENST00000250448 MRVI1Q9Y6F6 885 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms