RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DISP2A7MBM2 1401 aa23.08■■□□□ 1.28
CDC42EP1-201ENST00000249014 LRP6O75581 1613 aa23.08■■□□□ 1.28
CDC42EP1-201ENST00000249014 CHST3Q7LGC8 479 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 NLRP10Q86W26 655 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 LLPHQ9BRT6 129 aaKnown RBP23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 ANKRD36CQ5JPF3 1778 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 BCL9O00512 1426 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 PI16Q6UXB8 463 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 MYH3P11055 1940 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 MYH7P12883 1935 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 MYH15Q9Y2K3 1946 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 CDHR2Q9BYE9 1310 aa23.07■■□□□ 1.28
CDC42EP1-201ENST00000249014 CYP19A1P11511 503 aaPredicted RBP23.06■■□□□ 1.28
CDC42EP1-201ENST00000249014 MCM5P33992 734 aa23.06■■□□□ 1.28
CDC42EP1-201ENST00000249014 ZAP70P43403 619 aa23.06■■□□□ 1.28
CDC42EP1-201ENST00000249014 GREM2Q9H772 168 aa23.06■■□□□ 1.28
CDC42EP1-201ENST00000249014 RIPOR2Q9Y4F9 1068 aa23.06■■□□□ 1.28
CDC42EP1-201ENST00000249014 H3BQV1 296 aa23.06■■□□□ 1.28
CDC42EP1-201ENST00000249014 IFFO2Q5TF58 517 aa23.06■■□□□ 1.28
CDC42EP1-201ENST00000249014 TTLL11Q8NHH1 800 aa23.06■■□□□ 1.28
CDC42EP1-201ENST00000249014 AKAP11Q9UKA4 1901 aa23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 KDM4FA0A1W2PPD8 638 aa23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 ADCY5O95622 1261 aa23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 PTMAP06454 111 aaKnown RBP23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 CCT2P78371 535 aaKnown RBP23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 CAMK4Q16566 473 aa23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 PGBD1Q96JS3 809 aa23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 NUP62CLQ9H1M0 184 aa23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 NUP98P52948 1817 aa23.05■■□□□ 1.28
CDC42EP1-201ENST00000249014 ITGA6P23229 1130 aa23.04■■□□□ 1.28
CDC42EP1-201ENST00000249014 WASHC4Q2M389 1173 aa23.04■■□□□ 1.28
CDC42EP1-201ENST00000249014 NCOA5Q9HCD5 579 aaKnown RBP23.04■■□□□ 1.28
CDC42EP1-201ENST00000249014 DACT1Q9NYF0 836 aa23.04■■□□□ 1.28
CDC42EP1-201ENST00000249014 ZBTB1Q9Y2K1 713 aa23.04■■□□□ 1.28
CDC42EP1-201ENST00000249014 PTPDC1A2A3K4 754 aa23.04■■□□□ 1.28
CDC42EP1-201ENST00000249014 KDM4AO75164 1064 aa23.04■■□□□ 1.28
CDC42EP1-201ENST00000249014 HSP90AB3PQ58FF7 597 aa23.04■■□□□ 1.28
CDC42EP1-201ENST00000249014 ZFYP08048 801 aaPredicted RBP23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 ATP2B3Q16720 1220 aa23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 LDHAL6AQ6ZMR3 332 aa23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 PUS7LQ9H0K6 701 aaKnown RBP23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 GOLGA6L4A6NEF3 574 aa23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 CCDC192P0DO97 292 aa23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 PDIA3P30101 505 aaKnown RBP23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 MAP3K11Q16584 847 aa23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 LRRFIP1Q32MZ4 808 aaKnown RBP23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 METTL24Q5JXM2 366 aa23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 MPNDQ8N594 471 aa23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 ZSCAN16Q9H4T2 348 aaPredicted RBP23.03■■□□□ 1.28
CDC42EP1-201ENST00000249014 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.03■■□□□ 1.287e-10■■□□□ 11.4
CDC42EP1-201ENST00000249014 COL14A1Q05707 1796 aaKnown RBP23.02■■□□□ 1.28
CDC42EP1-201ENST00000249014 AP5Z1O43299 807 aa23.02■■□□□ 1.28
CDC42EP1-201ENST00000249014 FOSBP53539 338 aa23.02■■□□□ 1.28
CDC42EP1-201ENST00000249014 CTSWP56202 376 aa23.02■■□□□ 1.28
CDC42EP1-201ENST00000249014 HAND2P61296 217 aa23.02■■□□□ 1.28
CDC42EP1-201ENST00000249014 SALL1Q9NSC2 1324 aa23.02■■□□□ 1.28
CDC42EP1-201ENST00000249014 PPFIA3O75145 1194 aa23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 MCAMP43121 646 aa23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 APPBP2Q92624 585 aa23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 ABCC12Q96J65 1359 aa23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 FGAP02671 866 aa23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 ADD1P35611 737 aaKnown RBP23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 HMGN5P82970 282 aaKnown RBP23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 ZNF274Q96GC6 653 aaPredicted RBP23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 GPHNQ9NQX3 736 aaPredicted RBP23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 NAP1L2Q9ULW6 460 aaPredicted RBP23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 MYO5AQ9Y4I1 1855 aaKnown RBP23.01■■□□□ 1.27
CDC42EP1-201ENST00000249014 IRS4O14654 1257 aaPredicted RBP23■■□□□ 1.27
CDC42EP1-201ENST00000249014 NAA16Q6N069 864 aaPredicted RBP23■■□□□ 1.27
CDC42EP1-201ENST00000249014 VGLL2Q8N8G2 317 aa23■■□□□ 1.27
CDC42EP1-201ENST00000249014 SYTL4Q96C24 671 aaPredicted RBP23■■□□□ 1.27
CDC42EP1-201ENST00000249014 PLCH1Q4KWH8 1693 aa23■■□□□ 1.27
CDC42EP1-201ENST00000249014 NR1I2O75469 434 aa23■■□□□ 1.27
CDC42EP1-201ENST00000249014 CKAP2LQ8IYA6 745 aa23■■□□□ 1.27
CDC42EP1-201ENST00000249014 FBXL16Q8N461 479 aa23■■□□□ 1.27
CDC42EP1-201ENST00000249014 TNMDQ9H2S6 317 aa23■■□□□ 1.27
CDC42EP1-201ENST00000249014 CTNNA3Q9UI47 895 aa23■■□□□ 1.27
CDC42EP1-201ENST00000249014 MRVI1Q9Y6F6 885 aa23■■□□□ 1.27
CDC42EP1-201ENST00000249014 ANKRD18BA2A2Z9 1011 aa22.99■■□□□ 1.27
CDC42EP1-201ENST00000249014 TRMT112Q9UI30 125 aaKnown RBP22.99■■□□□ 1.27
CDC42EP1-201ENST00000249014 TYRO3Q06418 890 aa22.99■■□□□ 1.27
CDC42EP1-201ENST00000249014 IMMTQ16891 758 aaKnown RBP22.99■■□□□ 1.27
CDC42EP1-201ENST00000249014 CNNM1Q9NRU3 951 aa22.99■■□□□ 1.27
CDC42EP1-201ENST00000249014 DDX19AQ9NUU7 478 aaKnown RBP22.99■■□□□ 1.27
CDC42EP1-201ENST00000249014 TBC1D2BQ9UPU7 963 aa22.99■■□□□ 1.27
CDC42EP1-201ENST00000249014 DDX60Q8IY21 1712 aaKnown RBP22.98■■□□□ 1.27
CDC42EP1-201ENST00000249014 EVCP57679 992 aa22.98■■□□□ 1.27
CDC42EP1-201ENST00000249014 RBM43Q6ZSC3 357 aaKnown RBP22.98■■□□□ 1.27
CDC42EP1-201ENST00000249014 BICD2Q8TD16 824 aa22.98■■□□□ 1.27
CDC42EP1-201ENST00000249014 ZNF830Q96NB3 372 aaPredicted RBP22.98■■□□□ 1.27
CDC42EP1-201ENST00000249014 FTOQ9C0B1 505 aaKnown RBP eCLIP22.98■■□□□ 1.27
CDC42EP1-201ENST00000249014 CFAP45Q9UL16 551 aa22.98■■□□□ 1.27
CDC42EP1-201ENST00000249014 UBN2Q6ZU65 1347 aa22.98■■□□□ 1.27
CDC42EP1-201ENST00000249014 COL16A1Q07092 1604 aaPredicted RBP22.97■■□□□ 1.27
CDC42EP1-201ENST00000249014 GPAA1O43292 621 aa22.97■■□□□ 1.27
CDC42EP1-201ENST00000249014 PLCB2Q00722 1185 aa22.97■■□□□ 1.27
CDC42EP1-201ENST00000249014 CEBPZQ03701 1054 aaKnown RBP22.97■■□□□ 1.27
CDC42EP1-201ENST00000249014 CLSTN2Q9H4D0 955 aa22.97■■□□□ 1.27
CDC42EP1-201ENST00000249014 EXOC5O00471 708 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms