RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 KLRG2A4D1S0 409 aaPredicted RBP17.1■□□□□ 0.33
SDF2-201ENST00000247020 MCAMP43121 646 aa17.1■□□□□ 0.33
SDF2-201ENST00000247020 MCMDC2Q4G0Z9 681 aa17.1■□□□□ 0.33
SDF2-201ENST00000247020 ZSCAN25Q6NSZ9 544 aa17.1■□□□□ 0.33
SDF2-201ENST00000247020 LRRC37AA6NMS7 1700 aa17.09■□□□□ 0.33
SDF2-201ENST00000247020 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
SDF2-201ENST00000247020 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
SDF2-201ENST00000247020 ST18O60284 1047 aa17.09■□□□□ 0.33
SDF2-201ENST00000247020 TAF5LO75529 589 aa17.09■□□□□ 0.33
SDF2-201ENST00000247020 FKBP4Q02790 459 aaKnown RBP eCLIP17.09■□□□□ 0.33
SDF2-201ENST00000247020 DDR1Q08345 913 aa17.09■□□□□ 0.33
SDF2-201ENST00000247020 ZMYM1Q5SVZ6 1142 aa17.09■□□□□ 0.33
SDF2-201ENST00000247020 MAP4K1Q92918 833 aa17.09■□□□□ 0.33
SDF2-201ENST00000247020 KCNB2Q92953 911 aa17.09■□□□□ 0.33
SDF2-201ENST00000247020 ZNF804BA4D1E1 1349 aa17.08■□□□□ 0.33
SDF2-201ENST00000247020 MYO5AQ9Y4I1 1855 aaKnown RBP17.08■□□□□ 0.32
SDF2-201ENST00000247020 PHKA1P46020 1223 aa17.08■□□□□ 0.32
SDF2-201ENST00000247020 BAG6P46379 1132 aa17.08■□□□□ 0.32
SDF2-201ENST00000247020 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.08■□□□□ 0.32
SDF2-201ENST00000247020 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.32
SDF2-201ENST00000247020 ZAP70P43403 619 aa17.07■□□□□ 0.32
SDF2-201ENST00000247020 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
SDF2-201ENST00000247020 SCARF1Q14162 830 aa17.07■□□□□ 0.32
SDF2-201ENST00000247020 RPGRQ92834 1020 aaKnown RBP17.07■□□□□ 0.32
SDF2-201ENST00000247020 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
SDF2-201ENST00000247020 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
SDF2-201ENST00000247020 MCM2P49736 904 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 NECTIN1Q15223 517 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 SLC15A2Q16348 729 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 GNL3LQ9NVN8 582 aaKnown RBP17.06■□□□□ 0.32
SDF2-201ENST00000247020 STK32BQ9NY57 414 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 K7ELQ4 463 aaPredicted RBP17.06■□□□□ 0.32
SDF2-201ENST00000247020 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 PTH1RQ03431 593 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 EZH2Q15910 746 aaKnown RBP17.06■□□□□ 0.32
SDF2-201ENST00000247020 SPATA5Q8NB90 893 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 CRAMP1Q96RY5 1269 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 ANTXR1Q9H6X2 564 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 HMG20BQ9P0W2 317 aa17.06■□□□□ 0.32
SDF2-201ENST00000247020 PDS5AQ29RF7 1337 aaKnown RBP17.05■□□□□ 0.32
SDF2-201ENST00000247020 SEMA3EO15041 775 aa17.05■□□□□ 0.32
SDF2-201ENST00000247020 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
SDF2-201ENST00000247020 EN1Q05925 392 aaPredicted RBP17.05■□□□□ 0.32
SDF2-201ENST00000247020 CAVIN4Q5BKX8 364 aa17.05■□□□□ 0.32
SDF2-201ENST00000247020 RNF20Q5VTR2 975 aa17.05■□□□□ 0.32
SDF2-201ENST00000247020 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
SDF2-201ENST00000247020 CCDC24Q8N4L8 307 aa17.05■□□□□ 0.32
SDF2-201ENST00000247020 BRIP1Q9BX63 1249 aa17.05■□□□□ 0.32
SDF2-201ENST00000247020 PALD1Q9ULE6 856 aa17.05■□□□□ 0.32
SDF2-201ENST00000247020 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
SDF2-201ENST00000247020 ZKSCAN1P17029 563 aaPredicted RBP17.04■□□□□ 0.32
SDF2-201ENST00000247020 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
SDF2-201ENST00000247020 APPBP2Q92624 585 aa17.04■□□□□ 0.32
SDF2-201ENST00000247020 DSCC1Q9BVC3 393 aa17.04■□□□□ 0.32
SDF2-201ENST00000247020 TM6SF1Q9BZW5 370 aa17.04■□□□□ 0.32
SDF2-201ENST00000247020 RBM8AQ9Y5S9 174 aaKnown RBP17.04■□□□□ 0.32
SDF2-201ENST00000247020 SNX14Q9Y5W7 946 aa17.04■□□□□ 0.32
SDF2-201ENST00000247020 PARP3Q9Y6F1 533 aa17.04■□□□□ 0.32
SDF2-201ENST00000247020 IGSF3O75054 1194 aa17.03■□□□□ 0.32
SDF2-201ENST00000247020 BBOX1O75936 387 aa17.03■□□□□ 0.32
SDF2-201ENST00000247020 RASGRF1Q13972 1273 aa17.03■□□□□ 0.32
SDF2-201ENST00000247020 TSGA10IPQ3SY00 556 aa17.03■□□□□ 0.32
SDF2-201ENST00000247020 U3KPZ7 1027 aaPredicted RBP17.03■□□□□ 0.32
SDF2-201ENST00000247020 XDHP47989 1333 aa17.03■□□□□ 0.32
SDF2-201ENST00000247020 KCNJ4P48050 445 aa17.02■□□□□ 0.32
SDF2-201ENST00000247020 CCDC125Q86Z20 511 aa17.02■□□□□ 0.32
SDF2-201ENST00000247020 COL11A2P13942 1736 aaPredicted RBP17.02■□□□□ 0.32
SDF2-201ENST00000247020 LTBP1Q14766 1721 aa17.02■□□□□ 0.32
SDF2-201ENST00000247020 MAST3O60307 1309 aa17.02■□□□□ 0.32
SDF2-201ENST00000247020 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.32
SDF2-201ENST00000247020 DUOX1Q9NRD9 1551 aa17.02■□□□□ 0.32
SDF2-201ENST00000247020 KIAA1551Q9HCM1 1747 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 SNAP23O00161 211 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 ADD2P35612 726 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 PDE6BP35913 854 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 BCAMP50895 628 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.31
SDF2-201ENST00000247020 PI16Q6UXB8 463 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 C15orf52Q6ZUT6 534 aaKnown RBP17.02■□□□□ 0.31
SDF2-201ENST00000247020 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.31
SDF2-201ENST00000247020 DENND2AQ9ULE3 1009 aa17.02■□□□□ 0.31
SDF2-201ENST00000247020 MAP3K12Q12852 859 aa17.01■□□□□ 0.31
SDF2-201ENST00000247020 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
SDF2-201ENST00000247020 CCDC88AQ3V6T2 1871 aa17■□□□□ 0.31
SDF2-201ENST00000247020 SLC27A2O14975 620 aa17■□□□□ 0.31
SDF2-201ENST00000247020 CD2BP2O95400 341 aaKnown RBP17■□□□□ 0.31
SDF2-201ENST00000247020 MMP10P09238 476 aa17■□□□□ 0.31
SDF2-201ENST00000247020 PSMA5P28066 241 aa17■□□□□ 0.31
SDF2-201ENST00000247020 NEK4P51957 841 aa17■□□□□ 0.31
SDF2-201ENST00000247020 KRT32Q14532 448 aa17■□□□□ 0.31
SDF2-201ENST00000247020 FAM84BQ96KN1 310 aaPredicted RBP17■□□□□ 0.31
SDF2-201ENST00000247020 SEC62Q99442 399 aaKnown RBP17■□□□□ 0.31
SDF2-201ENST00000247020 PIH1D3Q9NQM4 214 aaKnown RBP17■□□□□ 0.31
SDF2-201ENST00000247020 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
SDF2-201ENST00000247020 RPAP1Q9BWH6 1393 aaPredicted RBP16.99■□□□□ 0.31
SDF2-201ENST00000247020 NPR1P16066 1061 aa16.99■□□□□ 0.31
SDF2-201ENST00000247020 VPS37DQ86XT2 251 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms