RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 DTHD1Q6ZMT9 781 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 CCDC77Q9BR77 488 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 PICK1Q9NRD5 415 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 CGNQ9P2M7 1197 aaKnown RBP8.34□□□□□ -1.07
SSR1-201ENST00000244763 RPL13P26373 211 aaKnown RBP8.34□□□□□ -1.07
SSR1-201ENST00000244763 ZNF165P49910 485 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 STMN4Q9H169 189 aaPredicted RBP8.34□□□□□ -1.07
SSR1-201ENST00000244763 PLS1Q14651 629 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 TAF12Q16514 161 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 EIF6P56537 245 aaKnown RBP8.34□□□□□ -1.07
SSR1-201ENST00000244763 SLC8A3P57103 927 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 CCDC171Q6TFL3 1326 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 HAND2P61296 217 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 MRPS9P82933 396 aaKnown RBP8.34□□□□□ -1.07
SSR1-201ENST00000244763 ZNF354CQ86Y25 554 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 PPP1R14CQ8TAE6 165 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 GABPB2Q8TAK5 448 aaPredicted RBP8.34□□□□□ -1.07
SSR1-201ENST00000244763 VEZTQ9HBM0 779 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 PAXBP1Q9Y5B6 917 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 ASXL2Q76L83 1435 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 PAG1Q9NWQ8 432 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 AKR1B10O60218 316 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 KRT2P35908 639 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 KRT83P78385 493 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 RRAGBQ5VZM2 374 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 TBC1D9Q6ZT07 1266 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 CEP128Q6ZU80 1094 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 CCDC65Q8IXS2 484 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 JAKMIP2Q96AA8 810 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 LMTK3Q96Q04 1460 aa8.34□□□□□ -1.07
SSR1-201ENST00000244763 TRIM75PA6NK02 468 aa8.34□□□□□ -1.08
SSR1-201ENST00000244763 FAM13AO94988 1023 aa8.34□□□□□ -1.08
SSR1-201ENST00000244763 PICALMQ13492 652 aa8.34□□□□□ -1.08
SSR1-201ENST00000244763 IRS4O14654 1257 aaPredicted RBP8.33□□□□□ -1.08
SSR1-201ENST00000244763 UBASH3AP57075 661 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 CDAN1Q8IWY9 1227 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 ANKRD44Q8N8A2 993 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 CEP63Q96MT8 703 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 MCM9Q9NXL9 1143 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 IQCGQ9H095 443 aaKnown RBP8.33□□□□□ -1.08
SSR1-201ENST00000244763 RAB3IL1Q8TBN0 382 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 JADE2Q9NQC1 790 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 TBX22Q9Y458 520 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 TNNT1P13805 278 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 CPLX3Q8WVH0 158 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 BEGAINQ9BUH8 593 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 GCP02774 474 aa8.33□□□□□ -1.08
SSR1-201ENST00000244763 ZSCAN22P10073 491 aaPredicted RBP8.33□□□□□ -1.08
SSR1-201ENST00000244763 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
SSR1-201ENST00000244763 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSR1-201ENST00000244763 V9GYY5 206 aaPredicted RBP8.33□□□□□ -1.08
SSR1-201ENST00000244763 UBE4AQ14139 1066 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 TMC6Q7Z403 805 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 WDR66Q8TBY9 1149 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 GPHNQ9NQX3 736 aaPredicted RBP8.32□□□□□ -1.08
SSR1-201ENST00000244763 RBM8AQ9Y5S9 174 aaKnown RBP8.32□□□□□ -1.08
SSR1-201ENST00000244763 GPATCH8Q9UKJ3 1502 aaKnown RBP8.32□□□□□ -1.08
SSR1-201ENST00000244763 ALDH1B1P30837 517 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 NUCB1Q02818 461 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 RGS22Q8NE09 1264 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 TXNDC16Q9P2K2 825 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 MAP3K5Q99683 1374 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 HSF2BPO75031 334 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 FLAD1Q8NFF5 587 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 IP6K1Q92551 441 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 RAD50Q92878 1312 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 F8W031 263 aaPredicted RBP8.32□□□□□ -1.08
SSR1-201ENST00000244763 H0YIN7 160 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 NFATC2IPQ8NCF5 419 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 ABCC1P33527 1531 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 A0A1W2PRG0 241 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 PPP2R5BQ15173 497 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 CEP112Q8N8E3 955 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 SNW1Q13573 536 aaKnown RBP8.32□□□□□ -1.08
SSR1-201ENST00000244763 NPATQ14207 1427 aa8.32□□□□□ -1.08
SSR1-201ENST00000244763 TUBBP07437 444 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 ATP2A2P16615 1042 aaKnown RBP8.31□□□□□ -1.08
SSR1-201ENST00000244763 MCTP2Q6DN12 878 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 TRMT1LQ7Z2T5 733 aaKnown RBP8.31□□□□□ -1.08
SSR1-201ENST00000244763 BRAPQ7Z569 592 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 HELLSQ9NRZ9 838 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 KIF5AQ12840 1032 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 TACC1O75410 805 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 HACE1Q8IYU2 909 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 KIFAP3Q92845 792 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 BRF1Q92994 677 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 SMTNP53814 917 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 DDX21Q9NR30 783 aaKnown RBP eCLIP8.31□□□□□ -1.08
SSR1-201ENST00000244763 NDC80O14777 642 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 IVNS1ABPQ9Y6Y0 642 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 UHRF1BP1Q6BDS2 1440 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 YTHDC2Q9H6S0 1430 aaKnown RBP8.31□□□□□ -1.08
SSR1-201ENST00000244763 RBM26Q5T8P6 1007 aaKnown RBP8.31□□□□□ -1.08
SSR1-201ENST00000244763 CTR9Q6PD62 1173 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 SPATA24Q86W54 205 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 ESYT1Q9BSJ8 1104 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 CSRNP2Q9H175 543 aa8.31□□□□□ -1.08
SSR1-201ENST00000244763 FRMD4BQ9Y2L6 1034 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms