RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 HSP90AA4PQ58FG1 418 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 MIGA1Q8NAN2 632 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 MRPS27Q92552 414 aaKnown RBP10.69□□□□□ -0.7
COL21A1-201ENST00000244728 CDC5LQ99459 802 aaKnown RBP10.69□□□□□ -0.7
COL21A1-201ENST00000244728 SLC26A6Q9BXS9 759 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 USP44Q9H0E7 712 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 PAG1Q9NWQ8 432 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 NRBP1Q9UHY1 535 aa10.69□□□□□ -0.7
COL21A1-201ENST00000244728 MAP3K4Q9Y6R4 1608 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
COL21A1-201ENST00000244728 RFC4P35249 363 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 GNG11P61952 73 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 RPGRQ92834 1020 aaKnown RBP10.68□□□□□ -0.7
COL21A1-201ENST00000244728 ERCC4Q92889 916 aaPredicted RBP10.68□□□□□ -0.7
COL21A1-201ENST00000244728 ERO1AQ96HE7 468 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 STX8Q9UNK0 236 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 PTH1RQ03431 593 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 GABPB1Q06547 395 aaPredicted RBP10.68□□□□□ -0.7
COL21A1-201ENST00000244728 ZNF444Q8N0Y2 327 aaPredicted RBP10.68□□□□□ -0.7
COL21A1-201ENST00000244728 CAGE1Q8TC20 777 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 SUCLG2Q96I99 432 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 IFNKQ9P0W0 207 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 F8W031 263 aaPredicted RBP10.68□□□□□ -0.7
COL21A1-201ENST00000244728 CYP7A1P22680 504 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 EIF4A1P60842 406 aaKnown RBP10.68□□□□□ -0.7
COL21A1-201ENST00000244728 MFSD6Q6ZSS7 791 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 SMARCE1Q969G3 411 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 FAM135BQ49AJ0 1406 aa10.68□□□□□ -0.7
COL21A1-201ENST00000244728 SLC27A2O14975 620 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 KIF1BO60333 1816 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 DNAJC10Q8IXB1 793 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 NCOA7Q8NI08 942 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 PRR36Q9H6K5 1346 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 TSPY2A6NKD2 308 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 UTP14CQ5TAP6 766 aaKnown RBP10.67□□□□□ -0.7
COL21A1-201ENST00000244728 ZBTB9Q96C00 473 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 ZFP91Q96JP5 570 aaPredicted RBP10.67□□□□□ -0.7
COL21A1-201ENST00000244728 METAP2P50579 478 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL21A1-201ENST00000244728 UBASH3AP57075 661 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 SETQ01105 290 aaPredicted RBP10.67□□□□□ -0.7
COL21A1-201ENST00000244728 APOBRQ0VD83 1088 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 AXDND1Q5T1B0 1012 aaPredicted RBP10.67□□□□□ -0.7
COL21A1-201ENST00000244728 CRACR2BQ8N4Y2 399 aaPredicted RBP10.67□□□□□ -0.7
COL21A1-201ENST00000244728 TANGO6Q9C0B7 1094 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 MAGEC2Q9UBF1 373 aaPredicted RBP10.67□□□□□ -0.7
COL21A1-201ENST00000244728 DACH1Q9UI36 760 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 ZNF215Q9UL58 517 aaPredicted RBP10.67□□□□□ -0.7
COL21A1-201ENST00000244728 JAK2O60674 1132 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 RPS6KB1P23443 525 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 LMAN1P49257 510 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 ADCK5Q3MIX3 580 aa10.67□□□□□ -0.7
COL21A1-201ENST00000244728 IQSEC2Q5JU85 1478 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 EPB41L2O43491 1005 aaKnown RBP10.66□□□□□ -0.7
COL21A1-201ENST00000244728 NR1I2O75469 434 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 RUFY1Q96T51 708 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 STAP2Q9UGK3 403 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 MARCKSP29966 332 aaPredicted RBP10.66□□□□□ -0.7
COL21A1-201ENST00000244728 KIF4BQ2VIQ3 1234 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 SSH3Q8TE77 659 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 CPLX3Q8WVH0 158 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 CDC42BPBQ9Y5S2 1711 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 AK9Q5TCS8 1911 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 CCDC196A0A1B0GTZ2 297 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 A0A1B0GVL5 298 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 PRAMEF22A3QJZ6 481 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 CCDC152Q4G0S7 254 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 JAKMIP3Q5VZ66 844 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 ANKRD18AQ8IVF6 992 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 WASF1Q92558 559 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 SETDB2Q96T68 719 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 TPCN1Q9ULQ1 816 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 MRVI1Q9Y6F6 885 aa10.66□□□□□ -0.7
COL21A1-201ENST00000244728 A0A1B0GUL7 405 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 PTPDC1A2A3K4 754 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 NLRP5P59047 1200 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 SSRP1Q08945 709 aaKnown RBP10.65□□□□□ -0.7
COL21A1-201ENST00000244728 CNNM3Q8NE01 707 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 NLRP3Q96P20 1036 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 LSG1Q9H089 658 aaKnown RBP10.65□□□□□ -0.7
COL21A1-201ENST00000244728 TSPYL1Q9H0U9 437 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 SLC4A4Q9Y6R1 1079 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 LARGE1O95461 756 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 PROSER3Q2NL68 480 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 ZNF622Q969S3 477 aaKnown RBP eCLIP10.65□□□□□ -0.7
COL21A1-201ENST00000244728 SLC52A2Q9HAB3 445 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 TTF1Q15361 905 aaPredicted RBP10.65□□□□□ -0.7
COL21A1-201ENST00000244728 ZKSCAN3Q9BRR0 538 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 TM6SF1Q9BZW5 370 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 SLAIN2Q9P270 581 aa10.65□□□□□ -0.7
COL21A1-201ENST00000244728 GIGYF1O75420 1035 aaPredicted RBP10.65□□□□□ -0.71
COL21A1-201ENST00000244728 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.71
COL21A1-201ENST00000244728 CCDC12Q8WUD4 166 aaPredicted RBP10.65□□□□□ -0.71
COL21A1-201ENST00000244728 METTL22Q9BUU2 404 aaPredicted RBP10.65□□□□□ -0.71
COL21A1-201ENST00000244728 ARFGAP3Q9NP61 516 aa10.65□□□□□ -0.71
COL21A1-201ENST00000244728 CATIPQ7Z7H3 387 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 RNF41Q9H4P4 317 aaPredicted RBP10.64□□□□□ -0.71
COL21A1-201ENST00000244728 ROBO2Q9HCK4 1378 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 SHROOM2Q13796 1616 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 SPHKAPQ2M3C7 1700 aa10.64□□□□□ -0.71
COL21A1-201ENST00000244728 PRC1O43663 620 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms