RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 SMIM5Q71RC9 77 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 SLC16A10Q8TF71 515 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 MPHOSPH8Q99549 860 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 SIL1Q9H173 461 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 GPR108Q9NPR9 543 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 CEP126Q9P2H0 1117 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 PA2G4Q9UQ80 394 aaKnown RBP11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 AKAP2Q9Y2D5 859 aa11.17□□□□□ -0.62
EXOSC9-201ENST00000243498 TUBGCP6Q96RT7 1819 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 ERC2O15083 957 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 LDHAL6AQ6ZMR3 332 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 DEFB132Q7Z7B7 95 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 AMIGO3Q86WK7 504 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 OSBPL3Q9H4L5 887 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 GREM2Q9H772 168 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 CNNM1Q9NRU3 951 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 PARP3Q9Y6F1 533 aa11.16□□□□□ -0.62
EXOSC9-201ENST00000243498 AOX1Q06278 1338 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 TTC41PQ6P2S7 1318 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 PNPLA7Q6ZV29 1317 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 RIC1Q4ADV7 1423 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 SMARCA5O60264 1052 aaPredicted RBP11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 MX1P20591 662 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 PDE4AP27815 886 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 LSM11P83369 360 aaKnown RBP eCLIP11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 PLEKHM2Q8IWE5 1019 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 SYNE4Q8N205 404 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 BCL11AQ9H165 835 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 IL1RAPL2Q9NP60 686 aa11.15□□□□□ -0.62
EXOSC9-201ENST00000243498 MROH5Q6ZUA9 1318 aa11.15□□□□□ -0.63
EXOSC9-201ENST00000243498 SASH1O94885 1247 aa11.14□□□□□ -0.63
EXOSC9-201ENST00000243498 DSG2Q14126 1118 aa11.14□□□□□ -0.63
EXOSC9-201ENST00000243498 BMP2KLQ5H9B9 411 aa11.14□□□□□ -0.63
EXOSC9-201ENST00000243498 DDX46Q7L014 1031 aaKnown RBP11.14□□□□□ -0.63
EXOSC9-201ENST00000243498 AACSQ86V21 672 aa11.14□□□□□ -0.63
EXOSC9-201ENST00000243498 ANKRD18AQ8IVF6 992 aa11.14□□□□□ -0.63
EXOSC9-201ENST00000243498 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
EXOSC9-201ENST00000243498 CCDC85AQ96PX6 553 aaPredicted RBP11.14□□□□□ -0.63
EXOSC9-201ENST00000243498 TBC1D12O60347 775 aa11.13□□□□□ -0.63
EXOSC9-201ENST00000243498 PDE1AP54750 535 aa11.13□□□□□ -0.63
EXOSC9-201ENST00000243498 PRR5LQ6MZQ0 368 aa11.13□□□□□ -0.63
EXOSC9-201ENST00000243498 ZNF594Q96JF6 807 aaPredicted RBP11.13□□□□□ -0.63
EXOSC9-201ENST00000243498 STAP2Q9UGK3 403 aa11.13□□□□□ -0.63
EXOSC9-201ENST00000243498 POLRMTO00411 1230 aaKnown RBP11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 GLRX3O76003 335 aaKnown RBP11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 TNNI3KQ59H18 835 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 METTL24Q5JXM2 366 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 TTC22Q5TAA0 569 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 C16orf71Q8IYS4 520 aaPredicted RBP11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 RBM17Q96I25 401 aaKnown RBP11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 ECHDC1Q9NTX5 307 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 FPGT-TNNI3KV9GXZ4 949 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 CASZ1Q86V15 1759 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 PDE6BP35913 854 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 TFCP2Q12800 502 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 ATG9AQ7Z3C6 839 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 BRIP1Q9BX63 1249 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 ANO8Q9HCE9 1232 aaPredicted RBP11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 RIPOR2Q9Y4F9 1068 aa11.12□□□□□ -0.63
EXOSC9-201ENST00000243498 ABCC12Q96J65 1359 aa11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 MMP10P09238 476 aa11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 LRRC24Q50LG9 513 aa11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 CCDC158Q5M9N0 1113 aa11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 TMC4Q7Z404 712 aa11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 SKAP1Q86WV1 359 aa11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 EAF2Q96CJ1 260 aaPredicted RBP11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 NEUROD6Q96NK8 337 aa11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 ANKRD2Q9GZV1 360 aa11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 BSDC1Q9NW68 430 aaPredicted RBP11.11□□□□□ -0.63
EXOSC9-201ENST00000243498 NRXN2Q9P2S2 1712 aa11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 PDE8BO95263 885 aa11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 DDR1Q08345 913 aa11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 GORABQ5T7V8 394 aa11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 CNTROBQ8N137 903 aa11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 PUS3Q9BZE2 481 aaKnown RBP11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 CCDC8Q9H0W5 538 aaPredicted RBP11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 TMX4Q9H1E5 349 aaPredicted RBP11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 UPF2Q9HAU5 1272 aaKnown RBP11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 SEC31BQ9NQW1 1179 aa11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
EXOSC9-201ENST00000243498 A0A1B0GUL7 405 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 BBOX1O75936 387 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 IFIT1P09914 478 aaKnown RBP11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 SLC5A1P13866 664 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 ALDH1B1P30837 517 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 GRAPQ13588 217 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 PUM3Q15397 648 aaKnown RBP11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 ATP2B3Q16720 1220 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 GRAPLQ8TC17 118 aaPredicted RBP11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 LPIN2Q92539 896 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 CRAMP1Q96RY5 1269 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 BACH2Q9BYV9 841 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 AK9Q5TCS8 1911 aa11.09□□□□□ -0.63
EXOSC9-201ENST00000243498 KLRG2A4D1S0 409 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms