RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 H7C1W4 665 aa16.19■□□□□ 0.18
PDZD11-201ENST00000239666 IGHMBP2P38935 993 aaKnown RBP16.19■□□□□ 0.18
PDZD11-201ENST00000239666 GMPSP49915 693 aaPredicted RBP16.19■□□□□ 0.18
PDZD11-201ENST00000239666 DEFB115Q30KQ5 88 aa16.19■□□□□ 0.18
PDZD11-201ENST00000239666 MAP1SQ66K74 1059 aaPredicted RBP16.19■□□□□ 0.18
PDZD11-201ENST00000239666 PLA2G12BQ9BX93 195 aa16.19■□□□□ 0.18
PDZD11-201ENST00000239666 BSDC1Q9NW68 430 aaPredicted RBP16.19■□□□□ 0.18
PDZD11-201ENST00000239666 CNOT7Q9UIV1 285 aaKnown RBP16.19■□□□□ 0.18
PDZD11-201ENST00000239666 MYH3P11055 1940 aa16.19■□□□□ 0.18
PDZD11-201ENST00000239666 RAD17O75943 681 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 ECE1P42892 770 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 GPSM2P81274 684 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 EXOSC9Q06265 439 aaKnown RBP16.18■□□□□ 0.18
PDZD11-201ENST00000239666 GCKRQ14397 625 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 CDC37L1Q7L3B6 337 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 PODNQ7Z5L7 613 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 TTLL11Q8NHH1 800 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 ZNF428Q96B54 188 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 POLLQ9UGP5 575 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 PGAP2Q9UHJ9 254 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
PDZD11-201ENST00000239666 TAF1P21675 1872 aa16.18■□□□□ 0.18
PDZD11-201ENST00000239666 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
PDZD11-201ENST00000239666 RIMBP2O15034 1052 aa16.17■□□□□ 0.18
PDZD11-201ENST00000239666 UFL1O94874 794 aa16.17■□□□□ 0.18
PDZD11-201ENST00000239666 MPHOSPH8Q99549 860 aa16.17■□□□□ 0.18
PDZD11-201ENST00000239666 ANKRD2Q9GZV1 360 aa16.17■□□□□ 0.18
PDZD11-201ENST00000239666 COL4A5P29400 1685 aa16.16■□□□□ 0.18
PDZD11-201ENST00000239666 RASSF10A6NK89 507 aa16.16■□□□□ 0.18
PDZD11-201ENST00000239666 ECE2O60344 883 aa16.16■□□□□ 0.18
PDZD11-201ENST00000239666 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
PDZD11-201ENST00000239666 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
PDZD11-201ENST00000239666 SEC31BQ9NQW1 1179 aa16.16■□□□□ 0.18
PDZD11-201ENST00000239666 ABT1Q9ULW3 272 aaKnown RBP16.16■□□□□ 0.18
PDZD11-201ENST00000239666 COLQQ9Y215 455 aaPredicted RBP16.16■□□□□ 0.18
PDZD11-201ENST00000239666 LEMD3Q9Y2U8 911 aa16.16■□□□□ 0.18
PDZD11-201ENST00000239666 MAP2K1Q02750 393 aaPredicted RBP16.15■□□□□ 0.18
PDZD11-201ENST00000239666 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
PDZD11-201ENST00000239666 AGBL3Q8NEM8 1001 aa16.15■□□□□ 0.18
PDZD11-201ENST00000239666 DBNDD1Q9H9R9 158 aa16.15■□□□□ 0.18
PDZD11-201ENST00000239666 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
PDZD11-201ENST00000239666 PSMD14O00487 310 aa16.14■□□□□ 0.17
PDZD11-201ENST00000239666 VIL1P09327 827 aaKnown RBP16.14■□□□□ 0.17
PDZD11-201ENST00000239666 G2E3Q7L622 706 aa16.14■□□□□ 0.17
PDZD11-201ENST00000239666 HHIPL1Q96JK4 782 aa16.14■□□□□ 0.17
PDZD11-201ENST00000239666 TRPM7Q96QT4 1865 aa16.14■□□□□ 0.17
PDZD11-201ENST00000239666 ANKRD18BA2A2Z9 1011 aa16.13■□□□□ 0.17
PDZD11-201ENST00000239666 YDJCA8MPS7 323 aa16.13■□□□□ 0.17
PDZD11-201ENST00000239666 E9PSI1 815 aa16.13■□□□□ 0.17
PDZD11-201ENST00000239666 ALDH1L1O75891 902 aa16.13■□□□□ 0.17
PDZD11-201ENST00000239666 CSF1RP07333 972 aa16.13■□□□□ 0.17
PDZD11-201ENST00000239666 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
PDZD11-201ENST00000239666 DCPSQ96C86 337 aaKnown RBP16.13■□□□□ 0.17
PDZD11-201ENST00000239666 MYO3BQ8WXR4 1341 aa16.13■□□□□ 0.17
PDZD11-201ENST00000239666 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
PDZD11-201ENST00000239666 HSPA1AP0DMV8 641 aaKnown RBP16.12■□□□□ 0.17
PDZD11-201ENST00000239666 HSPA1BP0DMV9 641 aaKnown RBP16.12■□□□□ 0.17
PDZD11-201ENST00000239666 IFIT5Q13325 482 aaKnown RBP16.12■□□□□ 0.17
PDZD11-201ENST00000239666 DOK7Q18PE1 504 aa16.12■□□□□ 0.17
PDZD11-201ENST00000239666 CCDC85AQ96PX6 553 aaPredicted RBP16.12■□□□□ 0.17
PDZD11-201ENST00000239666 BEGAINQ9BUH8 593 aa16.12■□□□□ 0.17
PDZD11-201ENST00000239666 COA1Q9GZY4 146 aa16.12■□□□□ 0.17
PDZD11-201ENST00000239666 GREM2Q9H772 168 aa16.12■□□□□ 0.17
PDZD11-201ENST00000239666 C9orf78Q9NZ63 289 aaPredicted RBP16.12■□□□□ 0.17
PDZD11-201ENST00000239666 MINPP1Q9UNW1 487 aa16.12■□□□□ 0.17
PDZD11-201ENST00000239666 MED23Q9ULK4 1368 aa16.12■□□□□ 0.17
PDZD11-201ENST00000239666 ZNF609O15014 1411 aa16.11■□□□□ 0.17
PDZD11-201ENST00000239666 LTBP1Q14766 1721 aa16.11■□□□□ 0.17
PDZD11-201ENST00000239666 USP17L3A6NCW0 530 aa16.11■□□□□ 0.17
PDZD11-201ENST00000239666 USP17L4A6NCW7 530 aa16.11■□□□□ 0.17
PDZD11-201ENST00000239666 ITGA6P23229 1130 aa16.11■□□□□ 0.17
PDZD11-201ENST00000239666 CCT4P50991 539 aaKnown RBP16.11■□□□□ 0.17
PDZD11-201ENST00000239666 USP17L1Q7RTZ2 530 aa16.11■□□□□ 0.17
PDZD11-201ENST00000239666 OGFOD1Q8N543 542 aa16.11■□□□□ 0.17
PDZD11-201ENST00000239666 MAP2K2P36507 400 aa16.1■□□□□ 0.17
PDZD11-201ENST00000239666 KCNJ4P48050 445 aa16.1■□□□□ 0.17
PDZD11-201ENST00000239666 VEGFBP49765 207 aa16.1■□□□□ 0.17
PDZD11-201ENST00000239666 RSBN1LQ6PCB5 846 aaPredicted RBP16.1■□□□□ 0.17
PDZD11-201ENST00000239666 JARID2Q92833 1246 aaPredicted RBP16.1■□□□□ 0.17
PDZD11-201ENST00000239666 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
PDZD11-201ENST00000239666 BOLA1Q9Y3E2 137 aa16.1■□□□□ 0.17
PDZD11-201ENST00000239666 TLL2Q9Y6L7 1015 aa16.1■□□□□ 0.17
PDZD11-201ENST00000239666 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
PDZD11-201ENST00000239666 GRM8O00222 908 aa16.09■□□□□ 0.17
PDZD11-201ENST00000239666 CT47B1P0C2W7 299 aaPredicted RBP16.09■□□□□ 0.17
PDZD11-201ENST00000239666 CTCFP49711 727 aaPredicted RBP16.09■□□□□ 0.17
PDZD11-201ENST00000239666 CCDC57Q2TAC2 916 aa16.09■□□□□ 0.17
PDZD11-201ENST00000239666 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
PDZD11-201ENST00000239666 SULF1Q8IWU6 871 aa16.09■□□□□ 0.17
PDZD11-201ENST00000239666 PTPRCP08575 1304 aa16.09■□□□□ 0.17
PDZD11-201ENST00000239666 WDR33Q9C0J8 1336 aaKnown RBP16.09■□□□□ 0.17
PDZD11-201ENST00000239666 POTEFA5A3E0 1075 aa16.08■□□□□ 0.16
PDZD11-201ENST00000239666 CELF2O95319 508 aaKnown RBP16.08■□□□□ 0.16
PDZD11-201ENST00000239666 USP17L8P0C7I0 530 aa16.08■□□□□ 0.16
PDZD11-201ENST00000239666 CASP7P55210 303 aa16.08■□□□□ 0.16
PDZD11-201ENST00000239666 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
PDZD11-201ENST00000239666 STRIP1Q5VSL9 837 aa16.08■□□□□ 0.16
PDZD11-201ENST00000239666 PRDM10Q9NQV6 1147 aa16.08■□□□□ 0.16
PDZD11-201ENST00000239666 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms