RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 UBE3BQ7Z3V4 1068 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 DBNDD2Q9BQY9 259 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 ZMYND15Q9H091 742 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 CYP21A2P08686 494 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
CTSD-201ENST00000236671 Q6ZUG5 572 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 BRF1Q92994 677 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 SEC62Q99442 399 aaKnown RBP18.34■□□□□ 0.53
CTSD-201ENST00000236671 HAUS7Q99871 368 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 CBX8Q9HC52 389 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 USP16Q9Y5T5 823 aa18.34■□□□□ 0.53
CTSD-201ENST00000236671 TRIM37O94972 964 aa18.33■□□□□ 0.52
CTSD-201ENST00000236671 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.52
CTSD-201ENST00000236671 IFNL2Q8IZJ0 200 aa18.33■□□□□ 0.52
CTSD-201ENST00000236671 DNAJC2Q99543 621 aaKnown RBP18.33■□□□□ 0.52
CTSD-201ENST00000236671 NR1I2O75469 434 aa18.32■□□□□ 0.52
CTSD-201ENST00000236671 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
CTSD-201ENST00000236671 CASP7P55210 303 aa18.32■□□□□ 0.52
CTSD-201ENST00000236671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
CTSD-201ENST00000236671 PTGS1P23219 599 aa18.31■□□□□ 0.52
CTSD-201ENST00000236671 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
CTSD-201ENST00000236671 ZNF710Q8N1W2 664 aa18.31■□□□□ 0.52
CTSD-201ENST00000236671 SMARCC2Q8TAQ2 1214 aa18.31■□□□□ 0.52
CTSD-201ENST00000236671 TSC1Q92574 1164 aa18.31■□□□□ 0.52
CTSD-201ENST00000236671 SH3TC1Q8TE82 1336 aa18.31■□□□□ 0.52
CTSD-201ENST00000236671 HSP90B1P14625 803 aaKnown RBP18.31■□□□□ 0.52
CTSD-201ENST00000236671 SCRN1Q12765 414 aa18.31■□□□□ 0.52
CTSD-201ENST00000236671 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
CTSD-201ENST00000236671 TDRD7Q8NHU6 1098 aaKnown RBP18.31■□□□□ 0.52
CTSD-201ENST00000236671 BICD2Q8TD16 824 aa18.31■□□□□ 0.52
CTSD-201ENST00000236671 A0A087WZG4 1122 aa18.3■□□□□ 0.52
CTSD-201ENST00000236671 DDX11Q96FC9 970 aa18.3■□□□□ 0.52
CTSD-201ENST00000236671 ATP5J2-PTCD1G3V325 749 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
CTSD-201ENST00000236671 PLA2G4DQ86XP0 818 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 TTC5Q8N0Z6 440 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 ZSCAN16Q9H4T2 348 aaPredicted RBP18.29■□□□□ 0.52
CTSD-201ENST00000236671 PALLDQ8WX93 1383 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 H3BQV1 296 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 PFKFB2O60825 505 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 IFFO2Q5TF58 517 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 DCAF5Q96JK2 942 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 LLPHQ9BRT6 129 aaKnown RBP18.29■□□□□ 0.52
CTSD-201ENST00000236671 LRRC2Q9BYS8 371 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 KIF3AQ9Y496 699 aa18.29■□□□□ 0.52
CTSD-201ENST00000236671 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
CTSD-201ENST00000236671 ZNF75DP51815 510 aa18.28■□□□□ 0.52
CTSD-201ENST00000236671 BTAF1O14981 1849 aa18.28■□□□□ 0.52
CTSD-201ENST00000236671 LAMA4Q16363 1823 aa18.28■□□□□ 0.52
CTSD-201ENST00000236671 ADD1P35611 737 aaKnown RBP18.28■□□□□ 0.52
CTSD-201ENST00000236671 PLEKHG2Q9H7P9 1386 aa18.27■□□□□ 0.52
CTSD-201ENST00000236671 KCNQ4P56696 695 aa18.27■□□□□ 0.52
CTSD-201ENST00000236671 LMBR1LQ6UX01 489 aa18.27■□□□□ 0.52
CTSD-201ENST00000236671 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.27■□□□□ 0.52
CTSD-201ENST00000236671 NSUN7Q8NE18 718 aaKnown RBP18.27■□□□□ 0.52
CTSD-201ENST00000236671 PLBD2Q8NHP8 589 aa18.27■□□□□ 0.52
CTSD-201ENST00000236671 DNAJC25Q9H1X3 360 aa18.27■□□□□ 0.52
CTSD-201ENST00000236671 CFAP45Q9UL16 551 aa18.27■□□□□ 0.52
CTSD-201ENST00000236671 MYH15Q9Y2K3 1946 aa18.26■□□□□ 0.51
CTSD-201ENST00000236671 CTDNEP1O95476 244 aa18.26■□□□□ 0.51
CTSD-201ENST00000236671 HMGB1P09429 215 aaKnown RBP18.26■□□□□ 0.51
CTSD-201ENST00000236671 ZNF165P49910 485 aa18.26■□□□□ 0.51
CTSD-201ENST00000236671 FOXO4P98177 505 aa18.26■□□□□ 0.51
CTSD-201ENST00000236671 NAA16Q6N069 864 aaPredicted RBP18.26■□□□□ 0.51
CTSD-201ENST00000236671 DHX32Q7L7V1 743 aaKnown RBP18.26■□□□□ 0.51
CTSD-201ENST00000236671 CCDC186Q7Z3E2 898 aa18.26■□□□□ 0.51
CTSD-201ENST00000236671 NKX1-1Q15270 411 aaPredicted RBP18.26■□□□□ 0.51
CTSD-201ENST00000236671 FAM196AQ6ZSG2 479 aa18.26■□□□□ 0.51
CTSD-201ENST00000236671 ATG9AQ7Z3C6 839 aa18.26■□□□□ 0.51
CTSD-201ENST00000236671 NHSQ6T4R5 1651 aa18.26■□□□□ 0.51
CTSD-201ENST00000236671 TNS1Q9HBL0 1735 aaKnown RBP18.25■□□□□ 0.51
CTSD-201ENST00000236671 SLFNL1Q499Z3 407 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 PIGBQ92521 554 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 ARID3AQ99856 593 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 DSCC1Q9BVC3 393 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 CCDC94Q9BW85 323 aaPredicted RBP18.25■□□□□ 0.51
CTSD-201ENST00000236671 TRIM5Q9C035 493 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 HELLSQ9NRZ9 838 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 GOLIM4O00461 696 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 CAVIN2O95810 425 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 FGD1P98174 961 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 EXOSC10Q01780 885 aaKnown RBP18.25■□□□□ 0.51
CTSD-201ENST00000236671 LRMPQ12912 555 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 AGXT2Q9BYV1 514 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 PAG1Q9NWQ8 432 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
CTSD-201ENST00000236671 PTPDC1A2A3K4 754 aa18.24■□□□□ 0.51
CTSD-201ENST00000236671 FAM177BA6PVY3 158 aa18.24■□□□□ 0.51
CTSD-201ENST00000236671 H7C1W4 665 aa18.24■□□□□ 0.51
CTSD-201ENST00000236671 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
CTSD-201ENST00000236671 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
CTSD-201ENST00000236671 BCL2L12Q9HB09 334 aa18.24■□□□□ 0.51
CTSD-201ENST00000236671 RCOR1Q9UKL0 485 aa18.24■□□□□ 0.51
CTSD-201ENST00000236671 UTRNP46939 3433 aa18.24■□□□□ 0.51
CTSD-201ENST00000236671 TJP1Q07157 1748 aa18.24■□□□□ 0.51
CTSD-201ENST00000236671 CEBPZQ03701 1054 aaKnown RBP18.23■□□□□ 0.51
CTSD-201ENST00000236671 APOBRQ0VD83 1088 aa18.23■□□□□ 0.51
CTSD-201ENST00000236671 ZMYM1Q5SVZ6 1142 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms